Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|03363
Gene name
Location	scaffold_03:2479619..2480134
Strand	+
Gene length (bp)	515
Transcript length (bp)	447
Coding sequence length (bp)	447
Protein length (aa)	149

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05277	DUF726	Protein of unknown function (DUF726)	5.0E-27	22	118

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 26	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	29	51	22
2	66	88	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|03363 MASTAEGMSAEAEAAKRRDENKASRYWKVGLASVAGAAVIGVTGGLAAPLVAGALGGILGGVGLGGVASFLGIFW ANSALVGALFGAYGAKMTGEMMDSYAKEVEDFRFLPLNNNNNNNNNNNNQTSQEPPSQEPPTNQPQTKPTASA*
Coding	>Ophcf2\|03363 ATGGCATCCACCGCCGAGGGCATGTCCGCCGAAGCCGAGGCCGCCAAGCGCCGCGACGAGAACAAAGCCAGTCGG TACTGGAAAGTCGGTCTCGCTTCCGTCGCGGGCGCTGCTGTCATCGGCGTCACGGGTGGGCTGGCGGCTCCGCTC GTGGCCGGCGCGCTGGGAGGCATCTTGGGAGGCGTGGGACTGGGTGGCGTGGCGAGCTTCCTCGGCATCTTCTGG GCCAATAGTGCGCTGGTCGGGGCTTTATTCGGGGCATACGGCGCAAAGATGACGGGCGAAATGATGGACAGCTAC GCCAAAGAAGTCGAAGACTTCCGCTTCCTCCCCCTCAACAACAACAACAACAACAACAACAACAACAACAACCAA ACCTCCCAAGAACCCCCATCCCAAGAACCCCCAACCAACCAACCCCAAACCAAGCCCACCGCCTCCGCCTAA
Transcript	>Ophcf2\|03363 ATGGCATCCACCGCCGAGGGCATGTCCGCCGAAGCCGAGGCCGCCAAGCGCCGCGACGAGAACAAAGCCAGTCGG TACTGGAAAGTCGGTCTCGCTTCCGTCGCGGGCGCTGCTGTCATCGGCGTCACGGGTGGGCTGGCGGCTCCGCTC GTGGCCGGCGCGCTGGGAGGCATCTTGGGAGGCGTGGGACTGGGTGGCGTGGCGAGCTTCCTCGGCATCTTCTGG GCCAATAGTGCGCTGGTCGGGGCTTTATTCGGGGCATACGGCGCAAAGATGACGGGCGAAATGATGGACAGCTAC GCCAAAGAAGTCGAAGACTTCCGCTTCCTCCCCCTCAACAACAACAACAACAACAACAACAACAACAACAACCAA ACCTCCCAAGAACCCCCATCCCAAGAACCCCCAACCAACCAACCCCAAACCAAGCCCACCGCCTCCGCCTAA
Gene	>Ophcf2\|03363 ATGGCATCCACCGCCGAGGGCATGTCCGCCGAAGCCGAGGCCGCCAAGCGCCGCGACGAGAACAAAGCCAGTCGG TACTGGAAAGTCGGTCTCGCTTCCGTCGCGGGCGCTGCTGTCATCGGCGTCACGGGTGGGCTGGCGGCTCCGCTC GTGGCCGGCGCGCTGGGAGGCATCTTGGGAGGCGTGGGACTGGGTGGCGTGGCGAGCTTCCTCGGCATCTTCTGG GCCAATAGTGCGCTGGTCGGGGCTTTATTCGGGGCATACGGCGCAAAGATGACGGTCAGTACGAACAAGCAACCT TGTCTATCTTGGCCCAAACATCTCCTAACATGAGATGATGACCTCAGGGCGAAATGATGGACAGCTACGCCAAAG AAGTCGAAGACTTCCGCTTCCTCCCCCTCAACAACAACAACAACAACAACAACAACAACAACAACCAAACCTCCC AAGAACCCCCATCCCAAGAACCCCCAACCAACCAACCCCAAACCAAGCCCACCGCCTCCGCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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