© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03355 |
| Gene name | |
| Location | scaffold_03:2450721..2453029 |
| Strand | + |
| Gene length (bp) | 2308 |
| Transcript length (bp) | 1860 |
| Coding sequence length (bp) | 1860 |
| Protein length (aa) | 620 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.7E-29 | 115 | 396 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.6E-08 | 410 | 587 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.4E-08 | 146 | 259 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 52 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 177 | 196 | 19 |
| 2 | 201 | 223 | 22 |
| 3 | 235 | 257 | 22 |
| 4 | 279 | 301 | 22 |
| 5 | 370 | 387 | 17 |
| 6 | 424 | 446 | 22 |
| 7 | 458 | 476 | 18 |
| 8 | 486 | 508 | 22 |
| 9 | 515 | 537 | 22 |
| 10 | 552 | 574 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 80.46 | 45.23 | 115.69 |
| Alive | In ants, during behavior modification | 47.78 | 22.58 | 72.98 |
| Dead | In ants, recently dead | 40.89 | 22.53 | 59.25 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.012960 | yes |
| Alive | Dead | 0.438593 | no |
| Dead | Fungus | 0.000238 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03355 MPRHCVLPQQAGEGSLYEAIPSARARYDSHIGLAAFHRDIFLFKAPRPVCGWGILFNLVSRPRFGCFSHNAHDPI AGFLDVPRCCQPAAPVAMTDSARSQPKLPVQQLVILVVARLAEPLAYTSIYPYLPEMISDFGIPQVDIARWAGLT TAVFAVSQGLAAVPWGRASDRYGRKPVVLFGLASTMICFIVWGMSTSLTMAIIARAVQGAGSGNVAIIRTIVAEI VPVKELQPRAFSIMPLVWSIGSVVGPAFGGFFAQPATKYPDWFGNIDFFHRFPYALPNLIASAFFLFSATTTFLF LQESLSSKRGQHDVGLTLGHRLTHLFTRKSKPPRPSDAETPSDQEHPIPSQKLSAPEPPPGMKEAFTRQTVISLV AYTFTSMHSVAFDQNVTVFLNYPVMEHTPENTQLPFFFNGGFGLKSDKIGIIFAIYGTTCGLIQFFLYPPLCRRF GILKCWQFCSIAMPFIYIITPYASLFPTQQSRLTAVVLVLMLKGLVGIIAFPCITILFTNSCSSTRILGTVNGFA TAFSGFARAIGPATTGFTFTWGVRHGCIAAAYYFLAIIAFIGAIPGFMVEEGDGPTRSEAESVEEAAADHQATAR TRLVKGPFRATLDNLLNQC* |
| Coding | >Ophcf2|03355 ATGCCGCGACACTGTGTTCTCCCGCAGCAGGCTGGTGAGGGGTCACTGTACGAGGCGATACCCTCGGCGCGCGCA CGGTACGACAGCCACATCGGCCTGGCAGCCTTCCATCGGGACATTTTTTTGTTCAAGGCCCCAAGGCCCGTATGT GGATGGGGCATTCTGTTCAATCTCGTCTCGCGTCCCCGGTTCGGCTGCTTCTCCCACAACGCGCACGATCCTATC GCGGGATTCCTCGACGTCCCCCGCTGCTGTCAACCTGCTGCTCCCGTCGCAATGACGGACTCGGCGCGGTCGCAG CCCAAGCTGCCCGTCCAACAACTCGTCATCCTAGTCGTCGCGCGGCTCGCTGAGCCACTGGCATACACCTCCATC TACCCGTACCTCCCCGAGATGATCAGCGACTTTGGCATCCCACAGGTGGACATTGCCCGTTGGGCCGGCCTCACC ACCGCCGTCTTCGCCGTCAGTCAGGGTCTGGCTGCCGTTCCGTGGGGTAGGGCTTCGGATCGGTATGGGAGGAAG CCGGTCGTCCTGTTTGGTCTTGCCAGTACCATGATCTGCTTCATCGTCTGGGGCATGTCGACCAGCTTGACCATG GCCATTATTGCGCGAGCCGTCCAGGGTGCTGGCAGTGGAAATGTCGCCATCATCAGGACCATCGTAGCCGAAATC GTCCCCGTCAAGGAACTACAGCCCAGAGCCTTCTCCATCATGCCGCTGGTATGGTCTATCGGCTCCGTCGTCGGC CCTGCATTCGGCGGTTTCTTCGCCCAGCCAGCAACCAAGTATCCAGACTGGTTCGGCAACATCGACTTCTTCCAT CGCTTCCCCTACGCTCTCCCCAACCTCATCGCCAGCGCCTTCTTCCTCTTCTCCGCCACCACAACCTTTCTCTTC CTCCAAGAATCCCTCTCATCCAAGCGCGGCCAACACGACGTGGGCCTCACTCTAGGCCACCGCCTCACCCACCTC TTCACCCGAAAGTCCAAACCACCCCGTCCCTCAGACGCCGAGACCCCCTCGGATCAAGAGCATCCAATCCCCTCA CAGAAGCTATCCGCGCCGGAACCCCCGCCAGGCATGAAGGAGGCCTTTACCCGACAGACGGTCATCAGCCTCGTA GCCTACACCTTTACGTCGATGCACTCAGTCGCCTTTGACCAGAACGTCACCGTCTTTCTAAACTATCCCGTAATG GAGCACACGCCCGAAAACACGCAGCTGCCCTTCTTCTTCAACGGCGGCTTCGGCCTCAAGTCGGATAAGATTGGC ATCATCTTTGCCATCTACGGCACCACCTGCGGCCTCATCCAGTTCTTCCTTTACCCCCCCCTATGCAGACGCTTC GGCATCTTGAAATGCTGGCAGTTTTGCTCCATCGCAATGCCCTTCATCTACATCATAACCCCCTACGCCTCCCTC TTCCCCACGCAACAAAGCCGCCTCACAGCAGTGGTCCTAGTCCTAATGCTCAAAGGTCTGGTGGGCATAATCGCC TTCCCCTGCATAACAATCCTCTTCACAAACTCGTGCTCCTCAACCCGCATCCTCGGCACGGTGAACGGCTTCGCC ACCGCCTTCAGCGGCTTCGCCCGCGCCATCGGCCCCGCCACCACCGGCTTCACATTCACCTGGGGTGTGAGACAC GGCTGCATCGCCGCGGCGTATTACTTCCTCGCCATCATTGCTTTCATCGGCGCCATTCCCGGGTTCATGGTCGAG GAGGGGGATGGTCCGACGAGGTCCGAGGCTGAGTCGGTTGAGGAAGCCGCTGCGGATCACCAAGCTACGGCGCGC ACCAGGCTCGTCAAAGGACCGTTCAGGGCGACGCTCGACAACCTTCTTAACCAATGTTAA |
| Transcript | >Ophcf2|03355 ATGCCGCGACACTGTGTTCTCCCGCAGCAGGCTGGTGAGGGGTCACTGTACGAGGCGATACCCTCGGCGCGCGCA CGGTACGACAGCCACATCGGCCTGGCAGCCTTCCATCGGGACATTTTTTTGTTCAAGGCCCCAAGGCCCGTATGT GGATGGGGCATTCTGTTCAATCTCGTCTCGCGTCCCCGGTTCGGCTGCTTCTCCCACAACGCGCACGATCCTATC GCGGGATTCCTCGACGTCCCCCGCTGCTGTCAACCTGCTGCTCCCGTCGCAATGACGGACTCGGCGCGGTCGCAG CCCAAGCTGCCCGTCCAACAACTCGTCATCCTAGTCGTCGCGCGGCTCGCTGAGCCACTGGCATACACCTCCATC TACCCGTACCTCCCCGAGATGATCAGCGACTTTGGCATCCCACAGGTGGACATTGCCCGTTGGGCCGGCCTCACC ACCGCCGTCTTCGCCGTCAGTCAGGGTCTGGCTGCCGTTCCGTGGGGTAGGGCTTCGGATCGGTATGGGAGGAAG CCGGTCGTCCTGTTTGGTCTTGCCAGTACCATGATCTGCTTCATCGTCTGGGGCATGTCGACCAGCTTGACCATG GCCATTATTGCGCGAGCCGTCCAGGGTGCTGGCAGTGGAAATGTCGCCATCATCAGGACCATCGTAGCCGAAATC GTCCCCGTCAAGGAACTACAGCCCAGAGCCTTCTCCATCATGCCGCTGGTATGGTCTATCGGCTCCGTCGTCGGC CCTGCATTCGGCGGTTTCTTCGCCCAGCCAGCAACCAAGTATCCAGACTGGTTCGGCAACATCGACTTCTTCCAT CGCTTCCCCTACGCTCTCCCCAACCTCATCGCCAGCGCCTTCTTCCTCTTCTCCGCCACCACAACCTTTCTCTTC CTCCAAGAATCCCTCTCATCCAAGCGCGGCCAACACGACGTGGGCCTCACTCTAGGCCACCGCCTCACCCACCTC TTCACCCGAAAGTCCAAACCACCCCGTCCCTCAGACGCCGAGACCCCCTCGGATCAAGAGCATCCAATCCCCTCA CAGAAGCTATCCGCGCCGGAACCCCCGCCAGGCATGAAGGAGGCCTTTACCCGACAGACGGTCATCAGCCTCGTA GCCTACACCTTTACGTCGATGCACTCAGTCGCCTTTGACCAGAACGTCACCGTCTTTCTAAACTATCCCGTAATG GAGCACACGCCCGAAAACACGCAGCTGCCCTTCTTCTTCAACGGCGGCTTCGGCCTCAAGTCGGATAAGATTGGC ATCATCTTTGCCATCTACGGCACCACCTGCGGCCTCATCCAGTTCTTCCTTTACCCCCCCCTATGCAGACGCTTC GGCATCTTGAAATGCTGGCAGTTTTGCTCCATCGCAATGCCCTTCATCTACATCATAACCCCCTACGCCTCCCTC TTCCCCACGCAACAAAGCCGCCTCACAGCAGTGGTCCTAGTCCTAATGCTCAAAGGTCTGGTGGGCATAATCGCC TTCCCCTGCATAACAATCCTCTTCACAAACTCGTGCTCCTCAACCCGCATCCTCGGCACGGTGAACGGCTTCGCC ACCGCCTTCAGCGGCTTCGCCCGCGCCATCGGCCCCGCCACCACCGGCTTCACATTCACCTGGGGTGTGAGACAC GGCTGCATCGCCGCGGCGTATTACTTCCTCGCCATCATTGCTTTCATCGGCGCCATTCCCGGGTTCATGGTCGAG GAGGGGGATGGTCCGACGAGGTCCGAGGCTGAGTCGGTTGAGGAAGCCGCTGCGGATCACCAAGCTACGGCGCGC ACCAGGCTCGTCAAAGGACCGTTCAGGGCGACGCTCGACAACCTTCTTAACCAATGTTAA |
| Gene | >Ophcf2|03355 ATGCCGCGACACTGTGTTCTCCCGCAGCAGGCTGGTGAGGGGTCACTGTACGAGGCGATACCCTCGGCGCGCGCA CGGTACGACAGCCACATCGGCCTGGCAGCCTTCCATCGGGACATTTTTTTGTTCAAGGCCCCAAGGCCCGTATGT GGATGGGGCATTGTGCGTCATGGGCCTATTTTCTGACTCGATTGCTGCGATCTTGCTTGGTAATTTACGCTGACC GCCTCCGGTGTCGCTCATGGCAGCTGTTCAATCTCGTCTCGCGTCCCCGGTTCGGCTGCTTCTCCCACAACGCGC ACGATCCTATCGCGGGATTCCTCGACGTCCCCCGCTGCTGTCAACCTGCTGCTGTCAACCTGCTGCTGTCAACCT GCTGCTGATCCCTCACTGACACTCACCTCGTCAGCCCGTCGCAATGACGGACTCGGCGCGGTCGCAGCCCAAGCT GCCCGTCCAACAACTCGTCATCCTAGGTCCGTCCCCCCCCCCCCCCCCAAAACAACCATCAAGCAAACTCCTCCC CCCAATCCTAACCCTAACGTCTTCATCCCACAGTCGTCGCGCGGCTCGCTGAGCCACTGGCATACACCTCCATCT ACCCGTACCTCCCCGAGATGATCAGCGACTTTGGCATCCCACAGGTGGACATTGCCCGTTGGGCCGGCCTCACCA CCGCCGTCTTCGCCGTCAGTCAGGGTCTGGCTGCCGTTCCGTGGGGTAGGGCTTCGGATCGGTATGGGAGGAAGC CGGTCGTCCTGTTTGGTCTTGCCAGTACCATGATCTGCTTCATCGTCTGGGGCATGTCGACCAGCTTGACCATGG CCATTATTGCGCGAGCCGTCCAGGGTGCTGGCAGTGGAAATGGTAACCTCACCTCTCTATCTTCTTTTTTTTACA TCAAAATGATCTCTACTGACGATAACCCAGTCGCCATCATCAGGACCATCGTAGCCGAAATCGTCCCCGTCAAGG AACTACAGCCCAGAGCCTTCTCCATCATGCCGCTGGTATGGTCTATCGGCTCCGTCGTCGGCCCTGCATTCGGCG GTTTCTTCGCCCAGCCAGCAACCAAGTATCCAGACTGGTTCGGCAACATCGACTTCTTCCATCGCTTCCCCTACG CTCTCCCCAACCTCATCGCCAGCGCCTTCTTCCTCTTCTCCGCCACCACAACCTTTCTCTTCCTCCAAGTACCTA CGTCATCTTCCCCCCCCTCATAAGCCCCTCGACAGCTAACACGCAAAAGGAATCCCTCTCATCCAAGCGCGGCCA ACACGACGTGGGCCTCACTCTAGGCCACCGCCTCACCCACCTCTTCACCCGAAAGTCCAAACCACCCCGTCCCTC AGACGCCGAGACCCCCTCGGATCAAGAGCATCCAATCCCCTCACAGAAGCTATCCGCGCCGGAACCCCCGCCAGG CATGAAGGAGGCCTTTACCCGACAGACGGTCATCAGCCTCGTAGCCTACACCTTTACGTCGATGCACTCAGTCGC CTTTGACCAGAACGTCACCGTCTTTCTAAACTATCCCGTAATGGAGCACACGCCCGAAAACACGCAGCTGCCCTT CTTCTTCAACGGCGGCTTCGGCCTCAAGTCGGATAAGATTGGCATCATCTTTGCCATCTACGGCACCACCTGCGG CCTCATCCAGTTCTTCCTTTACCCCCCCCTATGCAGACGCTTCGGCATCTTGAAATGCTGGCAGTTTTGCTGTAC GTCTCCCCCCTCTTCATCTGAAAACAAGTCCCGGCTGACACGACGAAATCAGCCATCGCAATGCCCTTCATCTAC ATCATAACCCCCTACGCCTCCCTCTTCCCCACGCAACAAAGCCGCCTCACAGCAGTGGTCCTAGTCCTAATGCTC AAAGGTCTGGTGGGCATAATCGCCTTCCCCTGCATAACAATCCTCTTCACAAACTCGTGCTCCTCAACCCGCATC CTCGGCACGGTGAACGGCTTCGCCACCGCCTTCAGCGGCTTCGCCCGCGCCATCGGCCCCGCCACCACCGGCTTC ACATTCACCTGGGGTGTGAGACACGGCTGCATCGCCGCGGCGTATTACTTCCTCGCCATCATTGCTTTCATCGGC GCCATTCCCGGGTTCATGGTCGAGGAGGGGGATGGTCCGACGAGGTCCGAGGCTGAGTCGGTTGAGGAAGCCGCT GCGGATCACCAAGGTGAAAGGAGTGGCGAGAATACCCCCTTGCTGACGGATGCATCTCGAAGCTACGGCGCGCAC CAGGCTCGTCAAAGGACCGTTCAGGGCGACGCTCGACAACCTTCTTAACCAATGTTAA |