Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03349
Gene name
Locationscaffold_03:2432135..2433128
Strand+
Gene length (bp)993
Transcript length (bp)930
Coding sequence length (bp)930
Protein length (aa) 310

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14610 Psg1 Ykl077w/Psg1 (Pma1 Stabilization in Golgi) 1.3E-36 109 286

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 257 279 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03349
MRSVTPLLTLLTLPLATSTTATLHRRGSDDITLSEEGYTTVAPTAPWVTINDEGQPAMTVTPSMATVSGTSTLDH
AAPHDLTASVYTWVTWGAVTTSTGAPPNPTAVDKKTGQGAFSRCYRDGKGDDFAPFCRPLVNSSLLTGTTYYVTW
DPDYYKPLATGNTTVEIAIRLDYLNQSTDTWTKLDTYDRVPARWGFWPLRLTDAHLKSQRYNNATITLLAYSRGA
DDERNHTAALPVTFTTLGVDDMAPPPVPRGATLLVALPVALGCFFLVLAGLFFWHRQTRRINLGNVMGRSRHGYT
GRRERGGGF*
Coding >Ophcf2|03349
ATGCGCTCCGTTACCCCCCTCCTCACCCTCCTCACCCTCCCCCTCGCAACCAGCACAACGGCAACGCTCCACCGC
CGCGGCTCCGACGACATAACCCTCTCAGAAGAAGGCTACACGACCGTCGCCCCGACAGCCCCATGGGTAACCATC
AACGACGAGGGCCAGCCCGCCATGACGGTGACGCCCTCCATGGCCACCGTCAGCGGGACAAGCACGCTCGACCAC
GCCGCTCCTCATGACCTCACCGCCTCCGTTTACACGTGGGTCACCTGGGGGGCGGTTACGACCAGCACGGGCGCG
CCGCCCAATCCGACGGCTGTGGATAAGAAGACGGGGCAGGGCGCGTTTTCGAGGTGTTATCGTGATGGCAAGGGG
GATGACTTTGCGCCGTTTTGTAGACCGCTCGTCAACTCTTCCCTCCTGACGGGCACGACTTACTATGTGACCTGG
GATCCAGACTACTACAAACCCCTCGCCACCGGAAACACCACGGTCGAAATCGCCATCCGCCTCGACTACCTCAAC
CAGTCCACCGACACCTGGACCAAACTCGACACTTACGACCGCGTCCCCGCAAGATGGGGCTTCTGGCCCCTCCGC
CTGACCGACGCCCACCTCAAATCCCAACGCTACAACAACGCGACCATCACCCTGCTGGCCTACTCCCGCGGCGCC
GACGACGAGCGCAACCACACGGCCGCCCTGCCCGTGACGTTCACGACGCTCGGCGTCGACGACATGGCGCCCCCT
CCCGTACCCCGGGGCGCAACGCTGCTGGTCGCCCTGCCCGTCGCGCTGGGATGCTTCTTCCTCGTCCTCGCCGGC
CTCTTCTTCTGGCATCGGCAGACGAGGCGCATCAATCTCGGGAATGTTATGGGTCGGTCGAGGCACGGGTATACG
GGGAGGAGGGAGAGGGGAGGAGGCTTCTGA
Transcript >Ophcf2|03349
ATGCGCTCCGTTACCCCCCTCCTCACCCTCCTCACCCTCCCCCTCGCAACCAGCACAACGGCAACGCTCCACCGC
CGCGGCTCCGACGACATAACCCTCTCAGAAGAAGGCTACACGACCGTCGCCCCGACAGCCCCATGGGTAACCATC
AACGACGAGGGCCAGCCCGCCATGACGGTGACGCCCTCCATGGCCACCGTCAGCGGGACAAGCACGCTCGACCAC
GCCGCTCCTCATGACCTCACCGCCTCCGTTTACACGTGGGTCACCTGGGGGGCGGTTACGACCAGCACGGGCGCG
CCGCCCAATCCGACGGCTGTGGATAAGAAGACGGGGCAGGGCGCGTTTTCGAGGTGTTATCGTGATGGCAAGGGG
GATGACTTTGCGCCGTTTTGTAGACCGCTCGTCAACTCTTCCCTCCTGACGGGCACGACTTACTATGTGACCTGG
GATCCAGACTACTACAAACCCCTCGCCACCGGAAACACCACGGTCGAAATCGCCATCCGCCTCGACTACCTCAAC
CAGTCCACCGACACCTGGACCAAACTCGACACTTACGACCGCGTCCCCGCAAGATGGGGCTTCTGGCCCCTCCGC
CTGACCGACGCCCACCTCAAATCCCAACGCTACAACAACGCGACCATCACCCTGCTGGCCTACTCCCGCGGCGCC
GACGACGAGCGCAACCACACGGCCGCCCTGCCCGTGACGTTCACGACGCTCGGCGTCGACGACATGGCGCCCCCT
CCCGTACCCCGGGGCGCAACGCTGCTGGTCGCCCTGCCCGTCGCGCTGGGATGCTTCTTCCTCGTCCTCGCCGGC
CTCTTCTTCTGGCATCGGCAGACGAGGCGCATCAATCTCGGGAATGTTATGGGTCGGTCGAGGCACGGGTATACG
GGGAGGAGGGAGAGGGGAGGAGGCTTCTGA
Gene >Ophcf2|03349
ATGCGCTCCGTTACCCCCCTCCTCACCCTCCTCACCCTCCCCCTCGCAACCAGCACAACGGCAACGCTCCACCGC
CGCGGCTCCGACGACATAACCCTCTCAGAAGAAGGCTACACGACCGTCGCCCCGACAGCCCCATGGGTAACCATC
AACGACGAGGGCCAGCCCGCCATGACGGTGACGCCCTCCATGGCCACCGTCAGCGGGACAAGCACGCTCGACCAC
GCCGCTCCTCATGACCTCACCGCCTCCGTTTACACGTGGGTCACCTGGGGGGCGGTTACGACCAGCACGGGCGCG
CCGCCCAATCCGACGGCTGTGGATAAGAAGACGGGGCAGGGCGCGTTTTCGAGGTGTTATCGTGATGGCAAGGGG
GATGACTTTGCGCCGTTTTGTAGACCGCTCGTCAACTCTTCCCTCCTGACGGGCACGACTTACTATGGTAAGCAC
CCACTCACCTACTCTACAATGCCATGGGTACTCGATACTAACCAGGCAAACAAAGTGACCTGGGATCCAGACTAC
TACAAACCCCTCGCCACCGGAAACACCACGGTCGAAATCGCCATCCGCCTCGACTACCTCAACCAGTCCACCGAC
ACCTGGACCAAACTCGACACTTACGACCGCGTCCCCGCAAGATGGGGCTTCTGGCCCCTCCGCCTGACCGACGCC
CACCTCAAATCCCAACGCTACAACAACGCGACCATCACCCTGCTGGCCTACTCCCGCGGCGCCGACGACGAGCGC
AACCACACGGCCGCCCTGCCCGTGACGTTCACGACGCTCGGCGTCGACGACATGGCGCCCCCTCCCGTACCCCGG
GGCGCAACGCTGCTGGTCGCCCTGCCCGTCGCGCTGGGATGCTTCTTCCTCGTCCTCGCCGGCCTCTTCTTCTGG
CATCGGCAGACGAGGCGCATCAATCTCGGGAATGTTATGGGTCGGTCGAGGCACGGGTATACGGGGAGGAGGGAG
AGGGGAGGAGGCTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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