Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03342
Gene name
Locationscaffold_03:2412879..2414167
Strand-
Gene length (bp)1288
Transcript length (bp)1116
Coding sequence length (bp)1116
Protein length (aa) 372

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 6.8E-31 6 369
PF00083 Sugar_tr Sugar (and other) transporter 4.4E-14 38 193
PF06609 TRI12 Fungal trichothecene efflux pump (TRI12) 2.2E-08 13 203

GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0008150 biological_process No
GO:0031224 intrinsic component of membrane No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 39 58 19
3 68 86 18
4 93 115 22
5 157 176 19
6 210 232 22
7 252 274 22
8 294 316 22
9 326 348 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03342
MTLLAFMSFNVTFVCISVVPVAARIVHDIGPGSHPRSTSVLLVTGWELGEAIGPFFIGPLSETWGRRPVIHAVNT
IFVLTIVLSALSRTTTLLIAARIAAGMTVTANVLNPAIAGDIMLPGERGSALAMTATANLAGGAIGSAVGGLVAE
GLGWRSVLWLGTALATLSTLLLIFYFPETYRPALTRGNQDEHAKQDGRGIGSVVRPAHMLWCSSILAVISLFHGL
GFSVYYIMSVTLPDIVENIYNGSPATTGLYLISFSVGSAISMLLCHFFLDNIYLRLSNRTPNHAKPEYWLPLAII
GSIMMPASTLLYGWTAQARLPEPLLLCVLSFIGTSLLLSMLPVFAYIVDAFGTYSASAMAAVMMTRCLMVS*
Coding >Ophcf2|03342
ATGACCCTCCTCGCCTTCATGTCCTTCAACGTCACGTTCGTCTGCATCTCCGTCGTCCCCGTAGCAGCCCGCATC
GTCCACGACATCGGCCCAGGCTCTCACCCTCGCTCAACCAGCGTCCTCCTCGTAACAGGCTGGGAACTAGGCGAA
GCCATCGGCCCCTTCTTCATCGGCCCGCTCTCCGAAACATGGGGTCGTCGACCCGTCATCCACGCCGTGAATACA
ATCTTCGTCCTGACCATTGTCCTGAGCGCGCTTTCGCGCACGACGACGCTGCTCATCGCCGCCAGGATCGCTGCC
GGGATGACGGTGACTGCAAACGTGCTCAACCCGGCTATTGCTGGCGATATCATGCTTCCCGGTGAGCGCGGGAGT
GCCTTGGCCATGACTGCTACGGCGAACCTCGCTGGCGGGGCCATCGGCTCCGCTGTCGGTGGTCTCGTGGCCGAG
GGACTTGGCTGGCGGTCCGTCCTCTGGCTTGGAACCGCTCTCGCTACGCTGAGTACCCTGCTGCTCATCTTCTAC
TTCCCCGAAACCTACCGTCCAGCCCTCACGAGAGGAAACCAAGATGAACACGCCAAGCAGGATGGAAGAGGCATC
GGATCTGTTGTCCGACCGGCACACATGCTTTGGTGCTCCAGCATCCTGGCCGTCATATCGCTGTTCCACGGACTG
GGCTTCTCCGTCTACTACATCATGTCCGTGACGTTGCCCGACATCGTCGAAAACATCTACAACGGCTCTCCCGCC
ACAACGGGCCTCTACCTCATAAGTTTCTCCGTAGGATCAGCCATCAGCATGCTCCTCTGCCACTTCTTCCTCGAC
AACATCTACCTCCGCCTCAGCAACCGCACCCCCAACCACGCAAAGCCCGAATACTGGCTCCCCCTCGCCATCATC
GGCTCAATAATGATGCCCGCCTCGACCCTACTCTACGGATGGACAGCTCAAGCCCGCCTCCCCGAGCCGCTCCTA
CTATGCGTCCTGTCCTTCATCGGAACCTCGCTTCTGCTATCGATGCTCCCCGTCTTCGCCTACATCGTCGACGCG
TTCGGCACCTACTCCGCCTCCGCCATGGCCGCCGTCATGATGACGAGGTGTTTGATGGTGTCTTGA
Transcript >Ophcf2|03342
ATGACCCTCCTCGCCTTCATGTCCTTCAACGTCACGTTCGTCTGCATCTCCGTCGTCCCCGTAGCAGCCCGCATC
GTCCACGACATCGGCCCAGGCTCTCACCCTCGCTCAACCAGCGTCCTCCTCGTAACAGGCTGGGAACTAGGCGAA
GCCATCGGCCCCTTCTTCATCGGCCCGCTCTCCGAAACATGGGGTCGTCGACCCGTCATCCACGCCGTGAATACA
ATCTTCGTCCTGACCATTGTCCTGAGCGCGCTTTCGCGCACGACGACGCTGCTCATCGCCGCCAGGATCGCTGCC
GGGATGACGGTGACTGCAAACGTGCTCAACCCGGCTATTGCTGGCGATATCATGCTTCCCGGTGAGCGCGGGAGT
GCCTTGGCCATGACTGCTACGGCGAACCTCGCTGGCGGGGCCATCGGCTCCGCTGTCGGTGGTCTCGTGGCCGAG
GGACTTGGCTGGCGGTCCGTCCTCTGGCTTGGAACCGCTCTCGCTACGCTGAGTACCCTGCTGCTCATCTTCTAC
TTCCCCGAAACCTACCGTCCAGCCCTCACGAGAGGAAACCAAGATGAACACGCCAAGCAGGATGGAAGAGGCATC
GGATCTGTTGTCCGACCGGCACACATGCTTTGGTGCTCCAGCATCCTGGCCGTCATATCGCTGTTCCACGGACTG
GGCTTCTCCGTCTACTACATCATGTCCGTGACGTTGCCCGACATCGTCGAAAACATCTACAACGGCTCTCCCGCC
ACAACGGGCCTCTACCTCATAAGTTTCTCCGTAGGATCAGCCATCAGCATGCTCCTCTGCCACTTCTTCCTCGAC
AACATCTACCTCCGCCTCAGCAACCGCACCCCCAACCACGCAAAGCCCGAATACTGGCTCCCCCTCGCCATCATC
GGCTCAATAATGATGCCCGCCTCGACCCTACTCTACGGATGGACAGCTCAAGCCCGCCTCCCCGAGCCGCTCCTA
CTATGCGTCCTGTCCTTCATCGGAACCTCGCTTCTGCTATCGATGCTCCCCGTCTTCGCCTACATCGTCGACGCG
TTCGGCACCTACTCCGCCTCCGCCATGGCCGCCGTCATGATGACGAGGTGTTTGATGGTGTCTTGA
Gene >Ophcf2|03342
ATGACCCTCCTCGCCTTCATGTCCTTCAACGTGTTCGTCCATCAACCCCCAATGCCTAATTCATCTCCTTCTAAA
CGCCACAGCACGTTCGTCTGCATCTCCGTCGTCCCCGTAGCAGCCCGCATCGTCCACGACATCGGCCCAGGCTCT
CACCCTCGCTCAACCAGCGTCCTCCTCGTAACAGGCTGGGAACTAGGCGAAGCCATCGGCCCCTTCTTCATCGGC
CCGCTCTCCGAAACATGGGGTCGTCGACCCGTCATCCACGCCGTGAATACAATCTTCGTCCTGACCATTGTCCTG
AGCGCGCTTTCGCGCACGACGACGCTGCTCATCGCCGCCAGGATCGCTGCCGGGATGACGGTGACTGCAAACGTG
CTCAACCCGGCTATTGCTGGCGATATCATGCTTCCCGGTGAGCGCGGGAGTGCCTTGGCCATGACTGCTACGGCG
AACCTCGCTGGCGGGGCCATCGGCTCCGCTGTCGGTGGTCTCGTGGCCGAGGGACTTGGCTGGCGGTCCGTCCTC
TGGCTTGGAACCGCTCTCGCTACGCTGAGTACCCTGCTGCTCATCTTCTACTTCCCCGAAACCTACCGTCCAGCC
CTCACGAGAGGAAACCAAGATGAACACGCCAAGCAGGATGGAAGAGGCATCGGATCTGTTGTCCGACCGGCACAC
ATGCTTTGGTGCTCCAGCATCCTGGCCGTCATATCGCTGTTCCACGGACTGGGCTTCTCCGTCTACTACATCATG
TCCGTGACGTTGCCCGACATCGTCGAAAACATCTACAACGGCTCTCCCGCCACAACGGGCCTCTACCTCATAAGT
TTCTGTACGCAACGCACCCCTTCCCTCCCCAACGCCCTGCCCTAACCCGACCGAAAACAAGCCGTAGGATCAGCC
ATCAGCATGCTCCTCTGCCACTTCTTCCTCGACAACATCTACCTCCGCCTCAGCAACCGCACCCCCAACCACGCA
AAGCCCGAATACTGGCTCCCCCTCGCCATCATCGGCTCAATAATGATGCCCGCCTCGACCCTACTCTACGGATGG
ACAGCTCAAGCCCGCCTCCCCGAGCCGCTCCTACTATGCGTCCTGTCCTTCATCGGAACCTCGCTTCTGCTATCG
ATGCTCCCCGTCTTCGCCTACATCGTCGACGCGTTCGGCACCTACTCCGCCTCCGCCATGGCCGCCGTCATGATG
ACGAGGTGTTTGATGGGTGCGCTGGTTCCGCTGGCTATATGGCCGCTGGTCGAGAGCCTTGGTTACGGATGGGGA
TTTAGTGTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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