Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03315
Gene name
Locationscaffold_03:2339468..2341148
Strand+
Gene length (bp)1680
Transcript length (bp)1578
Coding sequence length (bp)1578
Protein length (aa) 526

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03315
MASAIFLRRVLLPTVCAILVASMLLLLPSSSFRSTLANKGSRLDWSLIGLRPAIRTSRLHYLVPASQPNLQLCYN
LVSSIVNQYPVPMLLGWNGTGEFDAAQTHLAKLRAMKRYLHSLPPLEDDDLAVIVDGYDIIHQLPAEVIIERYFE
VADRANCQLAERLNISLADARERNFRQTLFWGPDKICFPFDPRAPRCWAVPPSTLGSNAFGPKTGNGEFEYNDPR
WLNSGTVIGPVDDLRRLIDETMDEISATYDPHYDLRESDQYYVSNVWARQEYWRSKRTRGGGGDPPGGPEDRVLP
EKRSELHETELHVAIDYESYIFQTKAGYEPFLRQLAFGEGDGNKTTISDDVLHLGDQFKPYTIPMPDHVRLALTR
LYSQLPDVRRQTGAREWIRNVKLGVNLVTRHIYAIWHCTGLKDSFDEQYRLQWWYPYTMSLLMAAVKSSQAGQFI
TSEPIDGRKWAPKTKFPVNNPSETVVYGGAWSDADEGKFVSWNELCAAHEEVLFRGERESVMVKSQLRRRRQQTS
*
Coding >Ophcf2|03315
ATGGCTTCCGCCATCTTCTTGCGCCGCGTCCTCCTACCGACCGTCTGCGCCATCTTGGTAGCATCTATGCTACTG
CTGCTGCCTTCGTCATCTTTTCGTTCGACTCTGGCCAACAAGGGTTCTCGACTGGACTGGAGCTTGATAGGGCTC
CGGCCGGCCATCCGGACTTCGCGACTGCACTATCTGGTCCCGGCCAGCCAACCAAATCTTCAGCTATGCTACAAT
CTGGTATCCTCCATCGTCAACCAATATCCCGTGCCCATGCTACTCGGCTGGAACGGCACTGGTGAGTTCGACGCC
GCTCAGACGCACCTGGCTAAGCTGCGTGCCATGAAGCGTTACCTACACTCGCTTCCTCCCCTTGAGGACGACGAT
CTGGCCGTCATTGTGGACGGCTACGACATCATCCACCAGCTTCCGGCCGAGGTCATCATTGAGCGCTACTTTGAA
GTCGCTGACCGGGCCAACTGCCAACTCGCCGAGCGTCTGAACATCTCGTTGGCCGATGCCCGGGAGCGCAACTTT
CGTCAGACTCTCTTCTGGGGCCCCGACAAGATCTGCTTCCCCTTTGACCCGAGGGCGCCCCGGTGCTGGGCAGTG
CCGCCGTCGACGCTGGGATCCAACGCCTTCGGCCCCAAGACGGGCAACGGCGAATTCGAGTACAACGATCCGCGC
TGGTTAAACTCGGGAACCGTCATCGGCCCCGTCGACGACCTGAGGAGGCTCATTGACGAGACAATGGACGAGATC
TCGGCCACGTACGATCCTCACTACGATCTGCGCGAGTCGGATCAGTACTACGTCTCCAACGTCTGGGCCCGGCAG
GAGTACTGGCGATCCAAACGGACCAGGGGAGGCGGCGGCGACCCGCCTGGCGGCCCGGAGGATCGCGTCCTCCCC
GAGAAGAGATCGGAGCTGCACGAGACGGAGCTGCACGTGGCCATCGACTACGAATCATATATTTTTCAAACAAAG
GCCGGATATGAGCCTTTTCTCCGCCAACTCGCCTTTGGTGAGGGGGATGGCAACAAGACGACCATCAGCGATGAT
GTGCTCCATCTCGGGGACCAATTCAAACCCTACACGATTCCCATGCCGGATCACGTTCGTCTGGCGCTCACGAGG
CTTTACAGCCAGTTACCGGACGTCCGACGCCAGACCGGGGCTCGTGAATGGATCCGAAACGTCAAGCTGGGCGTC
AATCTGGTGACGAGGCACATATACGCCATCTGGCACTGCACGGGCCTGAAGGACTCGTTCGACGAGCAGTATCGG
CTGCAGTGGTGGTACCCCTACACCATGTCGCTGCTCATGGCGGCCGTCAAGTCATCGCAGGCGGGCCAATTCATC
ACGTCTGAGCCCATTGACGGCCGCAAGTGGGCGCCCAAGACCAAGTTTCCCGTCAACAACCCGTCGGAGACGGTG
GTGTACGGGGGCGCCTGGTCCGATGCCGATGAAGGCAAGTTTGTGTCGTGGAATGAGCTCTGCGCCGCGCACGAA
GAAGTCCTCTTCCGTGGCGAGCGGGAGAGCGTGATGGTGAAGTCGCAGCTGAGGAGGAGGCGGCAGCAGACGTCC
TAA
Transcript >Ophcf2|03315
ATGGCTTCCGCCATCTTCTTGCGCCGCGTCCTCCTACCGACCGTCTGCGCCATCTTGGTAGCATCTATGCTACTG
CTGCTGCCTTCGTCATCTTTTCGTTCGACTCTGGCCAACAAGGGTTCTCGACTGGACTGGAGCTTGATAGGGCTC
CGGCCGGCCATCCGGACTTCGCGACTGCACTATCTGGTCCCGGCCAGCCAACCAAATCTTCAGCTATGCTACAAT
CTGGTATCCTCCATCGTCAACCAATATCCCGTGCCCATGCTACTCGGCTGGAACGGCACTGGTGAGTTCGACGCC
GCTCAGACGCACCTGGCTAAGCTGCGTGCCATGAAGCGTTACCTACACTCGCTTCCTCCCCTTGAGGACGACGAT
CTGGCCGTCATTGTGGACGGCTACGACATCATCCACCAGCTTCCGGCCGAGGTCATCATTGAGCGCTACTTTGAA
GTCGCTGACCGGGCCAACTGCCAACTCGCCGAGCGTCTGAACATCTCGTTGGCCGATGCCCGGGAGCGCAACTTT
CGTCAGACTCTCTTCTGGGGCCCCGACAAGATCTGCTTCCCCTTTGACCCGAGGGCGCCCCGGTGCTGGGCAGTG
CCGCCGTCGACGCTGGGATCCAACGCCTTCGGCCCCAAGACGGGCAACGGCGAATTCGAGTACAACGATCCGCGC
TGGTTAAACTCGGGAACCGTCATCGGCCCCGTCGACGACCTGAGGAGGCTCATTGACGAGACAATGGACGAGATC
TCGGCCACGTACGATCCTCACTACGATCTGCGCGAGTCGGATCAGTACTACGTCTCCAACGTCTGGGCCCGGCAG
GAGTACTGGCGATCCAAACGGACCAGGGGAGGCGGCGGCGACCCGCCTGGCGGCCCGGAGGATCGCGTCCTCCCC
GAGAAGAGATCGGAGCTGCACGAGACGGAGCTGCACGTGGCCATCGACTACGAATCATATATTTTTCAAACAAAG
GCCGGATATGAGCCTTTTCTCCGCCAACTCGCCTTTGGTGAGGGGGATGGCAACAAGACGACCATCAGCGATGAT
GTGCTCCATCTCGGGGACCAATTCAAACCCTACACGATTCCCATGCCGGATCACGTTCGTCTGGCGCTCACGAGG
CTTTACAGCCAGTTACCGGACGTCCGACGCCAGACCGGGGCTCGTGAATGGATCCGAAACGTCAAGCTGGGCGTC
AATCTGGTGACGAGGCACATATACGCCATCTGGCACTGCACGGGCCTGAAGGACTCGTTCGACGAGCAGTATCGG
CTGCAGTGGTGGTACCCCTACACCATGTCGCTGCTCATGGCGGCCGTCAAGTCATCGCAGGCGGGCCAATTCATC
ACGTCTGAGCCCATTGACGGCCGCAAGTGGGCGCCCAAGACCAAGTTTCCCGTCAACAACCCGTCGGAGACGGTG
GTGTACGGGGGCGCCTGGTCCGATGCCGATGAAGGCAAGTTTGTGTCGTGGAATGAGCTCTGCGCCGCGCACGAA
GAAGTCCTCTTCCGTGGCGAGCGGGAGAGCGTGATGGTGAAGTCGCAGCTGAGGAGGAGGCGGCAGCAGACGTCC
TAA
Gene >Ophcf2|03315
ATGGCTTCCGCCATCTTCTTGCGCCGCGTCCTCCTACCGACCGTCTGCGCCATCTTGGTAGCATCTATGCTACTG
CTGCTGCCTTCGTCATCTTTTCGTTCGACTCTGGCCAACAAGGTGTGCTCTCTCAGGTCTCCTGACGAGTCTTCT
GATGTTGCCTTATTTGGAACGACAACGGCTTTCAGGGGTTGCTTGAACGTACGCTAATCGTCTGTCTAGGGTTCT
CGACTGGACTGGAGCTTGATAGGGCTCCGGCCGGCCATCCGGACTTCGCGACTGCACTATCTGGTCCCGGCCAGC
CAACCAAATCTTCAGCTATGCTACAATCTGGTATCCTCCATCGTCAACCAATATCCCGTGCCCATGCTACTCGGC
TGGAACGGCACTGGTGAGTTCGACGCCGCTCAGACGCACCTGGCTAAGCTGCGTGCCATGAAGCGTTACCTACAC
TCGCTTCCTCCCCTTGAGGACGACGATCTGGCCGTCATTGTGGACGGCTACGACATCATCCACCAGCTTCCGGCC
GAGGTCATCATTGAGCGCTACTTTGAAGTCGCTGACCGGGCCAACTGCCAACTCGCCGAGCGTCTGAACATCTCG
TTGGCCGATGCCCGGGAGCGCAACTTTCGTCAGACTCTCTTCTGGGGCCCCGACAAGATCTGCTTCCCCTTTGAC
CCGAGGGCGCCCCGGTGCTGGGCAGTGCCGCCGTCGACGCTGGGATCCAACGCCTTCGGCCCCAAGACGGGCAAC
GGCGAATTCGAGTACAACGATCCGCGCTGGTTAAACTCGGGAACCGTCATCGGCCCCGTCGACGACCTGAGGAGG
CTCATTGACGAGACAATGGACGAGATCTCGGCCACGTACGATCCTCACTACGATCTGCGCGAGTCGGATCAGTAC
TACGTCTCCAACGTCTGGGCCCGGCAGGAGTACTGGCGATCCAAACGGACCAGGGGAGGCGGCGGCGACCCGCCT
GGCGGCCCGGAGGATCGCGTCCTCCCCGAGAAGAGATCGGAGCTGCACGAGACGGAGCTGCACGTGGCCATCGAC
TACGAATCATATATTTTTCAAACAAAGGCCGGATATGAGCCTTTTCTCCGCCAACTCGCCTTTGGTGAGGGGGAT
GGCAACAAGACGACCATCAGCGATGATGTGCTCCATCTCGGGGACCAATTCAAACCCTACACGATTCCCATGCCG
GATCACGTTCGTCTGGCGCTCACGAGGCTTTACAGCCAGTTACCGGACGTCCGACGCCAGACCGGGGCTCGTGAA
TGGATCCGAAACGTCAAGCTGGGCGTCAATCTGGTGACGAGGCACATATACGCCATCTGGCACTGCACGGGCCTG
AAGGACTCGTTCGACGAGCAGTATCGGCTGCAGTGGTGGTACCCCTACACCATGTCGCTGCTCATGGCGGCCGTC
AAGTCATCGCAGGCGGGCCAATTCATCACGTCTGAGCCCATTGACGGCCGCAAGTGGGCGCCCAAGACCAAGTTT
CCCGTCAACAACCCGTCGGAGACGGTGGTGTACGGGGGCGCCTGGTCCGATGCCGATGAAGGCAAGTTTGTGTCG
TGGAATGAGCTCTGCGCCGCGCACGAAGAAGTCCTCTTCCGTGGCGAGCGGGAGAGCGTGATGGTGAAGTCGCAG
CTGAGGAGGAGGCGGCAGCAGACGTCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail