Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03314
Gene name
Locationscaffold_03:2334149..2335354
Strand-
Gene length (bp)1205
Transcript length (bp)1095
Coding sequence length (bp)1095
Protein length (aa) 365

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03151 TPT Triose-phosphate Transporter family 3.2E-33 58 341

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 31 0.5

Transmembrane Domains

Domain # Start End Length
1 55 72 17
2 79 101 22
3 116 138 22
4 159 181 22
5 191 210 19
6 264 286 22
7 296 318 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03314
MARLSGDEPVALLRSEEQDAEFKAEVRDVESDAGSDPLPSQNLDHEYSIPSTVKFTWLGTYFFFSLLLTLYNKLV
LGMFSFPWLLTCLHASFASLGTYAMMHLGYFKLSRLGRREYLALLAFSALFTANIALSNLSLAMVSVPFYQTMRM
LCPIFTILIYRVWYSRTYSGMTYLSLVPLIIGAAMTTAGEMTFTDAGFLLTILGVVLAAVKTVVTNRFMTGSLAL
PPIEFLMRMSPLAALQALACATVTGEVAGFRDLITSGNIALGPALASLGGNGFLAFLLNIASFQTNKLAGALTMT
VCGNLKQCLTVLIGIFMFRISVDMLNGAGMGVTMVGAAIYSKAELDNRRKSRQPAYQALEQKPR*
Coding >Ophcf2|03314
ATGGCTCGCCTGAGCGGCGATGAGCCCGTGGCCCTTCTCAGGTCCGAGGAGCAAGACGCTGAGTTCAAGGCAGAG
GTGCGCGACGTCGAGAGCGATGCCGGTTCCGATCCTCTTCCCAGCCAGAACCTCGATCACGAGTACTCCATACCC
AGCACCGTCAAGTTCACCTGGCTCGGCACCTACTTCTTCTTTTCCCTGCTTCTCACTCTCTATAACAAGCTCGTA
CTGGGCATGTTCTCCTTTCCCTGGCTTCTCACCTGCCTCCACGCCTCGTTCGCAAGCTTGGGGACGTATGCCATG
ATGCACCTGGGCTACTTTAAGCTCTCGCGACTTGGACGGCGCGAATACCTGGCCCTTCTCGCCTTCAGCGCCCTC
TTCACCGCAAACATCGCCCTCTCCAACCTTTCGCTGGCCATGGTGTCGGTGCCATTTTACCAGACGATGCGCATG
TTGTGTCCCATCTTCACCATTCTCATCTACCGCGTCTGGTACAGCCGCACCTACAGCGGCATGACGTATCTGTCT
CTGGTTCCCCTCATCATCGGCGCTGCCATGACGACGGCTGGCGAGATGACGTTCACCGATGCCGGCTTCCTCCTC
ACCATACTCGGCGTTGTCCTCGCCGCGGTCAAGACCGTCGTCACGAACCGATTCATGACGGGCTCACTGGCCCTA
CCGCCGATCGAATTTTTGATGCGAATGTCACCACTCGCCGCTCTGCAGGCACTGGCATGCGCCACCGTGACGGGC
GAGGTGGCTGGCTTCCGCGACCTCATTACATCCGGAAACATCGCCCTCGGCCCCGCTCTGGCGTCGCTGGGTGGC
AATGGATTTCTCGCTTTCCTCCTCAACATTGCGTCCTTTCAAACCAACAAGCTGGCGGGTGCCCTGACGATGACG
GTGTGCGGCAACCTGAAGCAATGCCTAACGGTCCTGATTGGAATCTTCATGTTCAGGATTTCCGTCGACATGCTC
AACGGGGCGGGCATGGGCGTCACCATGGTTGGTGCAGCTATCTACAGCAAAGCAGAGTTGGACAACAGGAGGAAA
AGCCGGCAACCAGCTTACCAGGCCCTGGAGCAGAAGCCCAGGTAG
Transcript >Ophcf2|03314
ATGGCTCGCCTGAGCGGCGATGAGCCCGTGGCCCTTCTCAGGTCCGAGGAGCAAGACGCTGAGTTCAAGGCAGAG
GTGCGCGACGTCGAGAGCGATGCCGGTTCCGATCCTCTTCCCAGCCAGAACCTCGATCACGAGTACTCCATACCC
AGCACCGTCAAGTTCACCTGGCTCGGCACCTACTTCTTCTTTTCCCTGCTTCTCACTCTCTATAACAAGCTCGTA
CTGGGCATGTTCTCCTTTCCCTGGCTTCTCACCTGCCTCCACGCCTCGTTCGCAAGCTTGGGGACGTATGCCATG
ATGCACCTGGGCTACTTTAAGCTCTCGCGACTTGGACGGCGCGAATACCTGGCCCTTCTCGCCTTCAGCGCCCTC
TTCACCGCAAACATCGCCCTCTCCAACCTTTCGCTGGCCATGGTGTCGGTGCCATTTTACCAGACGATGCGCATG
TTGTGTCCCATCTTCACCATTCTCATCTACCGCGTCTGGTACAGCCGCACCTACAGCGGCATGACGTATCTGTCT
CTGGTTCCCCTCATCATCGGCGCTGCCATGACGACGGCTGGCGAGATGACGTTCACCGATGCCGGCTTCCTCCTC
ACCATACTCGGCGTTGTCCTCGCCGCGGTCAAGACCGTCGTCACGAACCGATTCATGACGGGCTCACTGGCCCTA
CCGCCGATCGAATTTTTGATGCGAATGTCACCACTCGCCGCTCTGCAGGCACTGGCATGCGCCACCGTGACGGGC
GAGGTGGCTGGCTTCCGCGACCTCATTACATCCGGAAACATCGCCCTCGGCCCCGCTCTGGCGTCGCTGGGTGGC
AATGGATTTCTCGCTTTCCTCCTCAACATTGCGTCCTTTCAAACCAACAAGCTGGCGGGTGCCCTGACGATGACG
GTGTGCGGCAACCTGAAGCAATGCCTAACGGTCCTGATTGGAATCTTCATGTTCAGGATTTCCGTCGACATGCTC
AACGGGGCGGGCATGGGCGTCACCATGGTTGGTGCAGCTATCTACAGCAAAGCAGAGTTGGACAACAGGAGGAAA
AGCCGGCAACCAGCTTACCAGGCCCTGGAGCAGAAGCCCAGGTAG
Gene >Ophcf2|03314
ATGGCTCGCCTGAGCGGCGATGAGCCCGTGGCCCTTCTCAGGTCCGAGGAGCAAGACGCTGAGTTCAAGGCAGAG
GTGCGCGACGTCGAGAGCGATGCCGGTTCCGATCCTCTTCCCAGCCAGAACCTCGATCACGAGTACTCCATACCC
AGCACCGTCAAGTTCACCTGGCTCGGCACCTACTTCTTCTTTTCCCTGCTTCTCACTCTCTATAACAAGCTCGTA
CTGGGCATGGTCAGTCTTCTTCCCCGTTCATTAGCAGCTGCAAACCTGACACGCGCTTGCAGTTCTCCTTTCCCT
GGCTTCTCACCTGCCTCCACGCCTCGTTCGCAAGCTTGGGGACGTATGCCATGATGCACCTGGGCTACTTTAAGC
TCTCGCGACTTGGACGGCGCGAATACCTGGCCCTTCTCGCCTTCAGCGCCCTCTTCACCGCAAACATCGCCCTCT
CCAACCTTTCGCTGGCCATGGTGTCGGTGCCATTTTACCAGACGATGCGCATGTTGTGTCCCATCTTCACCATTC
TCATCTACCGCGTCTGGTACAGCCGCACCTACAGCGGCATGACGTATCTGTCTCTGGTTCCCCTCATCATCGGCG
CTGCCATGACGACGGCTGGCGAGATGACGTTCACCGATGCCGGCTTCCTCCTCACCATACTCGGCGTTGTCCTCG
CCGCGGTCAAGGTACGTCAAATCGCTTATCCATTGACAACTAATTTGCACCTCCTAACCAGTCGGCAGACCGTCG
TCACGAACCGATTCATGACGGGCTCACTGGCCCTACCGCCGATCGAATTTTTGATGCGAATGTCACCACTCGCCG
CTCTGCAGGCACTGGCATGCGCCACCGTGACGGGCGAGGTGGCTGGCTTCCGCGACCTCATTACATCCGGAAACA
TCGCCCTCGGCCCCGCTCTGGCGTCGCTGGGTGGCAATGGATTTCTCGCTTTCCTCCTCAACATTGCGTCCTTTC
AAACCAACAAGCTGGCGGGTGCCCTGACGATGACGGTGTGCGGCAACCTGAAGCAATGCCTAACGGTCCTGATTG
GAATCTTCATGTTCAGGATTTCCGTCGACATGCTCAACGGGGCGGGCATGGGCGTCACCATGGTTGGTGCAGCTA
TCTACAGCAAAGCAGAGTTGGACAACAGGAGGAAAAGCCGGCAACCAGCTTACCAGGCCCTGGAGCAGAAGCCCA
GGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail