Protein ID | Ophcf2|03313 |
Gene name | |
Location | scaffold_03:2329580..2331811 |
Strand | + |
Gene length (bp) | 2231 |
Transcript length (bp) | 1944 |
Coding sequence length (bp) | 1944 |
Protein length (aa) | 648 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02582 | DUF155 | RMND1/Sif2-Sif3/Mrx10, DUF155 | 2.6E-52 | 336 | 518 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 542 | 564 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03313 MKPGTKFANRLCSIPPLDPRAMSSGKQRPSVLVTDSRQRATRTRRQDTSLASSGRTPMRFMTVDNVLQYNSQIPS GQPRGPPAPVQRLLPAAAGMAPGRRVAAVGLPNGQSRTGQSMPSRTTKISEKLVLLPEADPGEEDEAEGEAESEN LARRLQEEYNRPLKDEELDVLRKRGGIRGKSFAERLPKVQRKDKVSRLTAYCTAQAFKVGATSEFLRKKHEAKTK LYDDCLYVIYALPLLNGTDGYRVRGRPMLKTPGTGKTMLDLEIERSERRDHYEGYFEDDAYTNPESPDRGSRATP PFGDPSPDDDMHREHDDGFRSHINRIAPDAKSFAEMFVFSYGVVVFWNFTEHQEKDILADLTFADAQDGISLLTR PFEQDTFETEEFHFEYSADVKRPRVFNDMITLMPRSDHMIKLTISHSIAQSTKLCFFEERMSETMLDAQHVPKRL ALTGHLNMTRTEIVKILGRLFKSRVDINLSSNILDVPNFFWDSEPTLHPLYVAVREYLEIDPRIKVLNERCRVFL DLAEILSDSVNDAKMSYITWIIIILIVVSILVTVTEVGLRFGMLSKSSNKAKGLAGVTAISWAGGRSPGAVPEMI LVPPPAAADVDEIGKLALVLGLQSNASFDDVQQGIIDLRRAAARRRR* |
Coding | >Ophcf2|03313 ATGAAGCCCGGCACTAAATTCGCCAACCGTCTTTGTTCGATTCCTCCGCTTGACCCTCGTGCCATGTCTTCGGGA AAACAGCGACCATCTGTACTGGTTACGGACTCGAGGCAAAGGGCTACGAGAACGCGACGTCAGGACACTTCATTG GCGTCCAGCGGCCGGACGCCGATGCGATTTATGACGGTCGATAACGTCCTTCAGTACAACTCGCAGATCCCCTCC GGTCAACCACGGGGTCCTCCCGCTCCCGTTCAGCGATTACTTCCTGCAGCCGCCGGCATGGCTCCCGGACGTCGA GTCGCTGCCGTCGGGCTACCCAACGGCCAATCACGCACAGGGCAGTCGATGCCATCGAGGACGACTAAGATCAGC GAGAAGCTGGTCCTTCTCCCGGAGGCGGATCCAGGCGAAGAGGACGAGGCCGAGGGTGAGGCCGAGAGCGAGAAC TTGGCCAGAAGACTGCAGGAGGAGTATAACCGGCCGCTCAAAGACGAGGAGCTGGATGTGTTGAGGAAGAGAGGT GGCATCCGCGGCAAAAGCTTTGCAGAGCGGCTTCCTAAAGTACAGAGGAAAGACAAGGTTAGCCGTCTGACGGCC TACTGCACGGCTCAGGCGTTCAAGGTCGGCGCCACATCCGAGTTCCTGAGGAAGAAGCACGAGGCGAAAACGAAA CTCTACGACGACTGTCTCTACGTCATATACGCCCTACCCTTGCTCAACGGAACCGATGGCTACCGGGTCCGCGGC CGGCCCATGCTCAAGACTCCGGGGACAGGCAAAACCATGCTTGATCTGGAGATTGAGCGAAGCGAGCGTCGAGAC CATTACGAAGGATACTTTGAGGATGACGCATACACAAATCCTGAGAGTCCGGACAGAGGCAGTCGCGCGACGCCG CCCTTTGGCGACCCGTCTCCCGACGACGATATGCACAGGGAGCACGACGACGGGTTCCGATCGCACATCAATCGC ATCGCGCCCGACGCTAAGAGCTTCGCCGAGATGTTTGTCTTCTCCTACGGCGTAGTCGTCTTCTGGAACTTCACA GAGCATCAGGAAAAGGACATCCTCGCGGATCTGACATTCGCCGACGCCCAAGACGGCATCAGCCTCCTGACCAGG CCATTCGAGCAAGACACGTTCGAGACGGAAGAGTTTCACTTCGAGTACAGCGCCGACGTCAAGCGGCCGCGAGTG TTTAACGACATGATTACGCTGATGCCGCGGTCGGACCACATGATCAAGCTGACCATCAGCCACTCGATCGCGCAG AGCACCAAGCTGTGTTTCTTTGAGGAGCGGATGAGCGAGACGATGCTTGATGCGCAGCACGTGCCCAAGAGGCTG GCCTTGACCGGGCATCTCAACATGACGAGAACGGAGATTGTCAAGATACTCGGCAGGCTGTTTAAGAGCCGCGTC GACATCAATCTGTCATCCAATATTCTCGACGTGCCCAACTTCTTCTGGGACTCGGAACCGACACTGCATCCGCTT TACGTGGCGGTGCGCGAATACCTCGAGATCGACCCTCGTATCAAGGTGCTCAACGAGCGATGCCGCGTCTTCCTC GACCTGGCCGAGATCCTGTCGGACTCGGTCAACGACGCCAAGATGAGTTACATTACGTGGATCATCATCATCCTC ATCGTCGTCAGCATCCTCGTCACCGTCACCGAAGTCGGGCTGCGGTTCGGCATGCTTAGCAAGAGTTCGAACAAG GCCAAGGGCTTGGCGGGCGTGACAGCCATCAGTTGGGCTGGGGGTCGCAGCCCGGGCGCGGTGCCCGAGATGATA CTCGTTCCCCCGCCGGCGGCGGCGGACGTGGACGAAATAGGGAAGCTCGCTCTAGTGCTCGGCCTGCAGTCCAAC GCCAGCTTCGACGACGTGCAACAAGGTATCATCGACTTGAGGCGGGCGGCGGCGCGTCGGCGTCGTTAA |
Transcript | >Ophcf2|03313 ATGAAGCCCGGCACTAAATTCGCCAACCGTCTTTGTTCGATTCCTCCGCTTGACCCTCGTGCCATGTCTTCGGGA AAACAGCGACCATCTGTACTGGTTACGGACTCGAGGCAAAGGGCTACGAGAACGCGACGTCAGGACACTTCATTG GCGTCCAGCGGCCGGACGCCGATGCGATTTATGACGGTCGATAACGTCCTTCAGTACAACTCGCAGATCCCCTCC GGTCAACCACGGGGTCCTCCCGCTCCCGTTCAGCGATTACTTCCTGCAGCCGCCGGCATGGCTCCCGGACGTCGA GTCGCTGCCGTCGGGCTACCCAACGGCCAATCACGCACAGGGCAGTCGATGCCATCGAGGACGACTAAGATCAGC GAGAAGCTGGTCCTTCTCCCGGAGGCGGATCCAGGCGAAGAGGACGAGGCCGAGGGTGAGGCCGAGAGCGAGAAC TTGGCCAGAAGACTGCAGGAGGAGTATAACCGGCCGCTCAAAGACGAGGAGCTGGATGTGTTGAGGAAGAGAGGT GGCATCCGCGGCAAAAGCTTTGCAGAGCGGCTTCCTAAAGTACAGAGGAAAGACAAGGTTAGCCGTCTGACGGCC TACTGCACGGCTCAGGCGTTCAAGGTCGGCGCCACATCCGAGTTCCTGAGGAAGAAGCACGAGGCGAAAACGAAA CTCTACGACGACTGTCTCTACGTCATATACGCCCTACCCTTGCTCAACGGAACCGATGGCTACCGGGTCCGCGGC CGGCCCATGCTCAAGACTCCGGGGACAGGCAAAACCATGCTTGATCTGGAGATTGAGCGAAGCGAGCGTCGAGAC CATTACGAAGGATACTTTGAGGATGACGCATACACAAATCCTGAGAGTCCGGACAGAGGCAGTCGCGCGACGCCG CCCTTTGGCGACCCGTCTCCCGACGACGATATGCACAGGGAGCACGACGACGGGTTCCGATCGCACATCAATCGC ATCGCGCCCGACGCTAAGAGCTTCGCCGAGATGTTTGTCTTCTCCTACGGCGTAGTCGTCTTCTGGAACTTCACA GAGCATCAGGAAAAGGACATCCTCGCGGATCTGACATTCGCCGACGCCCAAGACGGCATCAGCCTCCTGACCAGG CCATTCGAGCAAGACACGTTCGAGACGGAAGAGTTTCACTTCGAGTACAGCGCCGACGTCAAGCGGCCGCGAGTG TTTAACGACATGATTACGCTGATGCCGCGGTCGGACCACATGATCAAGCTGACCATCAGCCACTCGATCGCGCAG AGCACCAAGCTGTGTTTCTTTGAGGAGCGGATGAGCGAGACGATGCTTGATGCGCAGCACGTGCCCAAGAGGCTG GCCTTGACCGGGCATCTCAACATGACGAGAACGGAGATTGTCAAGATACTCGGCAGGCTGTTTAAGAGCCGCGTC GACATCAATCTGTCATCCAATATTCTCGACGTGCCCAACTTCTTCTGGGACTCGGAACCGACACTGCATCCGCTT TACGTGGCGGTGCGCGAATACCTCGAGATCGACCCTCGTATCAAGGTGCTCAACGAGCGATGCCGCGTCTTCCTC GACCTGGCCGAGATCCTGTCGGACTCGGTCAACGACGCCAAGATGAGTTACATTACGTGGATCATCATCATCCTC ATCGTCGTCAGCATCCTCGTCACCGTCACCGAAGTCGGGCTGCGGTTCGGCATGCTTAGCAAGAGTTCGAACAAG GCCAAGGGCTTGGCGGGCGTGACAGCCATCAGTTGGGCTGGGGGTCGCAGCCCGGGCGCGGTGCCCGAGATGATA CTCGTTCCCCCGCCGGCGGCGGCGGACGTGGACGAAATAGGGAAGCTCGCTCTAGTGCTCGGCCTGCAGTCCAAC GCCAGCTTCGACGACGTGCAACAAGGTATCATCGACTTGAGGCGGGCGGCGGCGCGTCGGCGTCGTTAA |
Gene | >Ophcf2|03313 ATGAAGCCGTCACCAGCGGACTCCGGTGTGCCTCTGACAGGCCACCAACGGTCGCGGCTAAAACCCTCAGCAACC TTATGATGTCGGTCGAGCGGCACTAAATTCGCCAACCGTCTTTGTTCGATTCCTCCGCTTGACGTGAGTCACGTG ATATACCTCCCCAAACGTCCCAACAAGGACGCCCCGCTTTGCCGATGTGCCTTGTTAATCATCAACCTCTTCGAC CAACCTCGCAGCCTCGTGCCATGTCTTCGGGAAAACAGCGACCATCTGTACTGGTGCGGCTCCATTCTATGCTCA CCGTCCGTTTCTGGGCTAACTTATGCAGGTTACGGACTCGAGGCAAAGGGCTACGAGAACGCGACGTCAGGACAC TTCATTGGCGTCCAGCGGCCGGACGCCGATGCGATTTATGACGGTCGATAACGTCCTTCAGTACAACTCGCAGAT CCCCTCCGGTCAACCACGGGGTCCTCCCGCTCCCGTTCAGCGATTACTTCCTGCAGCCGCCGGCATGGCTCCCGG ACGTCGAGTCGCTGCCGTCGGGCTACCCAACGGCCAATCACGCACAGGGCAGTCGATGCCATCGAGGACGACTAA GATCAGCGAGAAGCTGGTCCTTCTCCCGGAGGCGGATCCAGGCGAAGAGGACGAGGCCGAGGGTGAGGCCGAGAG CGAGAACTTGGCCAGAAGACTGCAGGAGGAGTATAACCGGCCGCTCAAAGACGAGGAGCTGGATGTGTTGAGGAA GAGAGGTGGCATCCGCGGCAAAAGCTTTGCAGAGCGGCTTCCTAAAGTACAGAGGAAAGACAAGGTTAGCCGTCT GACGGCCTACTGCACGGCTCAGGCGTTCAAGGTCGGCGCCACATCCGAGTTCCTGAGGAAGAAGCACGAGGCGAA AACGAAACTCTACGACGACTGTCTCTACGTCATATACGCCCTACCCTTGCTCAACGGAACCGATGGCTACCGGGT CCGCGGCCGGCCCATGCTCAAGACTCCGGGGACAGGCAAAACCATGCTTGATCTGGAGATTGAGCGAAGCGAGCG TCGAGACCATTACGAAGGATACTTTGAGGATGACGCATACACAAATCCTGAGAGTCCGGACAGAGGCAGTCGCGC GACGCCGCCCTTTGGCGACCCGTCTCCCGACGACGATATGCACAGGGAGCACGACGACGGGTTCCGATCGCACAT CAATCGCATCGCGCCCGACGCTAAGAGCTTCGCCGAGATGTTTGTCTTCTCCTACGGCGTAGTCGTCTTCTGGAA CTTCACAGAGCATCAGGAAAAGGACATCCTCGCGGATCTGACATTCGCCGACGCCCAAGACGGCATCAGCCTCCT GACCAGGCCATTCGAGCAAGACACGTTCGAGACGGAAGAGTTTCACTTCGAGTACAGCGCCGACGTCAAGCGGCC GCGAGTGTTTAACGACATGATTACGCTGATGCCGCGGTCGGACCACATGATCAAGCTGACCATCAGCCACTCGAT CGCGCAGAGCACCAAGCTGTGTTTCTTTGAGGAGCGGATGAGCGAGACGATGCTTGATGCGCAGCACGTGCCCAA GAGGCTGGCCTTGACCGGGCATCTCAACATGACGAGAACGGAGATTGTCAAGATACTCGGCAGGCTGTTTAAGAG CCGCGTCGACATCAATCTGTGTAAGCTGGAAGAGCTGACAAGGGAGAAGATAAATTGCTGACGAGCTCACTGCAG CATCCAATATTCTCGACGTGCCCAACTTCTTCTGGGACTCGGAACCGACACTGCATCCGCTTTACGTGGCGGTGC GCGAATACCTCGAGATCGACCCTCGTATCAAGGTGCTCAACGAGCGATGCCGCGTCTTCCTCGACCTGGCCGAGA TCCTGTCGGACTCGGTCAACGACGCCAAGATGAGTTACATTACGTGGATCATCATCATCCTCATCGTCGTCAGCA TCCTCGTCACCGTCACCGAAGTCGGGCTGCGGTTCGGCATGCTTAGCAAGAGTTCGAACAAGGCCAAGGGCTTGG CGGGCGTGACAGCCATCAGTTGGGCTGGGGGTCGCAGCCCGGGCGCGGTGCCCGAGATGATACTCGTTCCCCCGC CGGCGGCGGCGGACGTGGACGAAATAGGGAAGCTCGCTCTAGTGCTCGGCCTGCAGTCCAACGCCAGCTTCGACG ACGTGCAACAAGGTATCATCGACTTGAGGCGGGCGGCGGCGCGTCGGCGTCGTTAA |