Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03309
Gene name
Locationscaffold_03:2317507..2318627
Strand+
Gene length (bp)1120
Transcript length (bp)1002
Coding sequence length (bp)1002
Protein length (aa) 334

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06966 DUF1295 Protein of unknown function (DUF1295) 5.7E-57 26 257
PF02544 Steroid_dh 3-oxo-5-alpha-steroid 4-dehydrogenase 1.3E-06 144 209

GO

GO Term Description Terminal node
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0006629 lipid metabolic process Yes
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0016491 oxidoreductase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 9 31 22
2 41 59 18
3 66 88 22
4 108 127 19
5 140 162 22
6 223 245 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03309
MATVHVLDNYYLAITALVTIAYQLLFFSIAYTFKFDKLTDLAGGSNFAVLAILTLSLSGQHHARQVVASLFLIIW
AVRLSGFLFFRILKTGSDDRFDDKRDKFFPFLGFWVFQMLWVWTVSLPVTVLNSPNVTQYPQHSFGTGRDIAGIV
LFVIGFLMEAVSDVQKYRFRQSHDKRAVCNKGLFAVSRHPNYFGEIIIQFSIYMIAVSSAADGYVSGQAYKALYA
TILGPFFLTILLMFVSGLPLSERPKAKSRYEKGNNWFEYEDWLQRTSILIPFPPQLYAKMPVFLKRSIFLEFPMY
VFDPVKHSDHSFPGGASETADERGRRGGDERLA*
Coding >Ophcf2|03309
ATGGCAACCGTCCACGTCCTGGACAACTACTACCTCGCCATCACCGCCCTCGTAACCATAGCCTATCAACTCCTC
TTCTTCTCCATCGCCTACACCTTCAAATTCGACAAGCTAACCGACCTCGCCGGCGGCTCCAACTTCGCCGTCCTC
GCCATCCTCACCCTCTCCCTCTCGGGTCAACACCACGCCCGCCAGGTCGTAGCCTCTCTCTTCCTCATCATCTGG
GCCGTCCGCCTCTCCGGCTTCCTCTTCTTCCGCATCCTTAAAACCGGCTCTGATGATCGCTTCGATGACAAGCGC
GACAAGTTCTTCCCTTTTCTTGGCTTCTGGGTCTTTCAGATGCTCTGGGTTTGGACCGTCTCTCTGCCCGTTACT
GTCCTCAACTCGCCCAACGTGACGCAGTATCCGCAGCATTCCTTTGGTACGGGCAGAGACATTGCAGGCATTGTC
CTCTTTGTCATCGGCTTTCTCATGGAGGCTGTCAGCGATGTGCAAAAGTATCGCTTCCGCCAGTCACACGATAAG
AGAGCCGTCTGCAACAAGGGCCTCTTTGCCGTCTCCCGCCATCCCAACTATTTTGGCGAAATCATCATTCAATTC
TCCATCTATATGATTGCCGTCTCCTCCGCCGCCGACGGCTACGTCAGCGGTCAAGCCTACAAAGCCCTCTACGCC
ACCATCCTGGGCCCTTTCTTCCTCACCATCCTTCTCATGTTCGTCTCCGGCCTACCGCTATCAGAGCGACCCAAG
GCCAAGTCACGGTACGAAAAGGGCAACAACTGGTTCGAGTACGAAGATTGGCTTCAGCGTACCAGCATCCTCATC
CCCTTCCCGCCCCAGCTGTACGCCAAGATGCCCGTCTTCCTGAAGCGATCCATCTTCCTCGAGTTCCCCATGTAC
GTCTTCGACCCTGTCAAACACTCGGATCACTCTTTTCCGGGCGGCGCTTCCGAGACGGCCGATGAGCGAGGGCGA
CGTGGTGGCGACGAGAGGCTGGCCTAA
Transcript >Ophcf2|03309
ATGGCAACCGTCCACGTCCTGGACAACTACTACCTCGCCATCACCGCCCTCGTAACCATAGCCTATCAACTCCTC
TTCTTCTCCATCGCCTACACCTTCAAATTCGACAAGCTAACCGACCTCGCCGGCGGCTCCAACTTCGCCGTCCTC
GCCATCCTCACCCTCTCCCTCTCGGGTCAACACCACGCCCGCCAGGTCGTAGCCTCTCTCTTCCTCATCATCTGG
GCCGTCCGCCTCTCCGGCTTCCTCTTCTTCCGCATCCTTAAAACCGGCTCTGATGATCGCTTCGATGACAAGCGC
GACAAGTTCTTCCCTTTTCTTGGCTTCTGGGTCTTTCAGATGCTCTGGGTTTGGACCGTCTCTCTGCCCGTTACT
GTCCTCAACTCGCCCAACGTGACGCAGTATCCGCAGCATTCCTTTGGTACGGGCAGAGACATTGCAGGCATTGTC
CTCTTTGTCATCGGCTTTCTCATGGAGGCTGTCAGCGATGTGCAAAAGTATCGCTTCCGCCAGTCACACGATAAG
AGAGCCGTCTGCAACAAGGGCCTCTTTGCCGTCTCCCGCCATCCCAACTATTTTGGCGAAATCATCATTCAATTC
TCCATCTATATGATTGCCGTCTCCTCCGCCGCCGACGGCTACGTCAGCGGTCAAGCCTACAAAGCCCTCTACGCC
ACCATCCTGGGCCCTTTCTTCCTCACCATCCTTCTCATGTTCGTCTCCGGCCTACCGCTATCAGAGCGACCCAAG
GCCAAGTCACGGTACGAAAAGGGCAACAACTGGTTCGAGTACGAAGATTGGCTTCAGCGTACCAGCATCCTCATC
CCCTTCCCGCCCCAGCTGTACGCCAAGATGCCCGTCTTCCTGAAGCGATCCATCTTCCTCGAGTTCCCCATGTAC
GTCTTCGACCCTGTCAAACACTCGGATCACTCTTTTCCGGGCGGCGCTTCCGAGACGGCCGATGAGCGAGGGCGA
CGTGGTGGCGACGAGAGGCTGGCCTAA
Gene >Ophcf2|03309
ATGGCAACCGTCCACGTCCTGGACAACTACTACCTCGCCATCACCGCCCTCGTAACCATAGCCTATCAACTCCTC
TTCTTCTCCATCGCCTACACCTTCAAATTCGACAAGCTAACCGGTAACCCTTCCCCTTCCCCTCCCCCCTTCCAA
TCAACCAGAAATCTCACCCGCCCAGACCTCGCCGGCGGCTCCAACTTCGCCGTCCTCGCCATCCTCACCCTCTCC
CTCTCGGGTCAACACCACGCCCGCCAGGTCGTAGCCTCTCTCTTCCTCATCATCTGGGCCGTCCGCCTCTCCGGC
TTCCTCTTCTTCCGCATCCTTAAAACCGGCTCTGATGATCGCTTCGATGACAAGCGCGACAAGTTCTTCCCTTTT
CTTGGCTTCTGGGTCTTTCAGATGCTCTGGGTTTGGACCGTCTCTCTGCCCGTTACTGTCCTCAACTCGCCCAAC
GTGACGCAGTATCCGCAGCATTCCTTTGGTACGGGCAGAGACATTGCAGGCATTGTCCTCTTTGTCATCGGCTTT
CTCATGGAGGCTGTCAGCGATGTGCAAAAGTATCGCTTCCGCCAGTCACACGATAAGAGAGCCGTCTGCAACAAG
GGCCTCTTTGCCGTCTCCCGCCATCCCAACTATTTTGGCGAAATCATCATTCAATTCTGTGAGGTCTACTGTTGT
TGTCCCCTACGTGTAGTATAACGCCTAACGCCAGATACCACCAGCCATCTATATGATTGCCGTCTCCTCCGCCGC
CGACGGCTACGTCAGCGGTCAAGCCTACAAAGCCCTCTACGCCACCATCCTGGGCCCTTTCTTCCTCACCATCCT
TCTCATGTTCGTCTCCGGCCTACCGCTATCAGAGCGACCCAAGGCCAAGTCACGGTACGAAAAGGGCAACAACTG
GTTCGAGTACGAAGATTGGCTTCAGCGTACCAGCATCCTCATCCCCTTCCCGCCCCAGCTGTACGCCAAGATGCC
CGTCTTCCTGAAGCGATCCATCTTCCTCGAGTTCCCCATGTACGTCTTCGACCCTGTCAAACACTCGGATCACTC
TTTTCCGGGCGGCGCTTCCGAGACGGCCGATGAGCGAGGGCGACGTGGTGGCGACGAGAGGCTGGCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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