Protein ID | Ophcf2|03308 |
Gene name | |
Location | scaffold_03:2314393..2316131 |
Strand | - |
Gene length (bp) | 1738 |
Transcript length (bp) | 1578 |
Coding sequence length (bp) | 1578 |
Protein length (aa) | 526 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 23 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 24 | 17 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 34.28 | 18.66 | 49.90 |
Alive | In ants, during behavior modification | 56.55 | 31.56 | 81.53 |
Dead | In ants, recently dead | 59.64 | 33.95 | 85.32 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.007042 | yes |
Alive | Dead | 0.799634 | no |
Dead | Fungus | 0.001768 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03308 MHRLEAWIVLAAYLGVLVTGLAYERQEHSLFARHGVRGGPAKVAQVFSAKMGKARGMSKDNANKNQNLNDNNANK DQGLNNNNNNFDNNNNNNNNNFNDNNNNNGNNFNSNANNGNGNNGNNFNNNNDNFNGNNGNGINFNNGNGNGNGN GNDFNNAAVTQAVGGSNQQTVTVTVTQTTTVFGNNAASATGAFGQSNAFGANNGNNFNNGNNFNNGNNGNLFNSG NSGGLGNLGNVNGNNFNANNNLANSAPAKTIIITGASVNGGNVANGASLNNVGTGGTGGTVIVSSQRQTGGTLNN VGSAGNSAVIISSQKQNNGINTVGGTGGTVLVSSQKQGVGSNVGLVNGVGSNQGSNQGVEIINLAGVNSINNGIR AVDGQNQCVINGVVMGVLQEQRGEKGKEAPAAKTIPLSDIGLGNAATTTRSQTTAATTPHHPSPPPQQQQQQQQQ QQQQQQQQQPQQPQQQRQQPPPSAPSPTKSRTPPAQPAQSTTAAAAAPPPANSAAADPKNTVLKSGLDLGALAPE * |
Coding | >Ophcf2|03308 ATGCATCGTCTCGAGGCCTGGATCGTCCTGGCGGCATACCTTGGTGTGCTGGTCACTGGGCTCGCGTATGAAAGG CAAGAGCACAGTCTGTTTGCGAGACATGGCGTCCGCGGGGGTCCCGCGAAAGTGGCGCAGGTCTTTTCCGCAAAG ATGGGCAAGGCTCGCGGGATGAGCAAGGACAACGCGAACAAGAATCAGAACTTGAACGACAACAATGCCAACAAA GATCAGGGCCTAAACAACAACAACAACAACTTCGACAACAACAACAACAACAACAACAACAACTTCAACGATAAC AATAACAACAACGGAAACAACTTTAATAGCAACGCGAATAACGGCAACGGCAACAATGGCAATAATTTCAACAAC AACAATGACAACTTCAACGGCAACAATGGCAATGGGATCAACTTTAACAACGGTAACGGCAATGGCAATGGCAAT GGAAACGACTTCAACAACGCCGCCGTGACGCAGGCTGTCGGTGGATCCAACCAGCAGACCGTCACGGTGACCGTT ACTCAGACGACGACCGTGTTTGGCAATAATGCTGCCTCCGCTACCGGAGCATTCGGCCAGAGCAATGCCTTTGGG GCCAACAACGGCAACAACTTCAACAACGGGAACAATTTCAACAACGGAAATAACGGGAACCTCTTCAACAGCGGC AACAGCGGCGGCCTGGGCAACCTAGGCAACGTCAATGGCAACAACTTCAATGCCAACAACAACCTGGCAAACAGT GCCCCGGCCAAGACCATCATCATCACGGGAGCCAGCGTAAACGGCGGGAACGTCGCTAACGGCGCCAGCCTCAAC AACGTCGGCACAGGCGGCACAGGCGGCACCGTCATCGTCTCCAGCCAGAGGCAAACCGGCGGCACCTTGAACAAC GTGGGCAGCGCAGGCAACAGCGCCGTCATCATATCCAGCCAGAAACAAAACAACGGCATAAACACCGTCGGTGGC ACGGGCGGCACCGTCCTCGTATCCAGCCAGAAACAAGGCGTCGGCAGCAACGTCGGCCTCGTCAACGGCGTCGGC AGCAACCAAGGCAGCAACCAAGGCGTCGAGATCATCAACCTCGCCGGCGTAAACTCCATCAACAACGGCATCAGA GCCGTCGACGGCCAGAACCAATGCGTCATCAATGGTGTCGTCATGGGTGTTCTTCAGGAACAGAGGGGGGAGAAG GGCAAGGAGGCTCCTGCGGCCAAAACGATCCCTCTGTCCGATATTGGTCTCGGAAACGCTGCCACAACGACGAGA TCGCAAACAACGGCAGCGACAACTCCCCATCACCCCTCCCCTCCGCCCCAACAACAACAACAACAGCAACAACAA CAACAGCAACAACAACAACAGCAACAACCCCAACAACCCCAACAACAAAGACAACAACCTCCTCCCTCCGCCCCA AGCCCAACCAAAAGCCGAACCCCCCCAGCCCAACCAGCCCAGTCAACAACCGCCGCCGCCGCAGCACCACCCCCT GCCAACTCGGCCGCCGCCGACCCCAAAAACACGGTGCTGAAATCCGGGCTTGATTTGGGGGCTCTGGCGCCCGAG TGA |
Transcript | >Ophcf2|03308 ATGCATCGTCTCGAGGCCTGGATCGTCCTGGCGGCATACCTTGGTGTGCTGGTCACTGGGCTCGCGTATGAAAGG CAAGAGCACAGTCTGTTTGCGAGACATGGCGTCCGCGGGGGTCCCGCGAAAGTGGCGCAGGTCTTTTCCGCAAAG ATGGGCAAGGCTCGCGGGATGAGCAAGGACAACGCGAACAAGAATCAGAACTTGAACGACAACAATGCCAACAAA GATCAGGGCCTAAACAACAACAACAACAACTTCGACAACAACAACAACAACAACAACAACAACTTCAACGATAAC AATAACAACAACGGAAACAACTTTAATAGCAACGCGAATAACGGCAACGGCAACAATGGCAATAATTTCAACAAC AACAATGACAACTTCAACGGCAACAATGGCAATGGGATCAACTTTAACAACGGTAACGGCAATGGCAATGGCAAT GGAAACGACTTCAACAACGCCGCCGTGACGCAGGCTGTCGGTGGATCCAACCAGCAGACCGTCACGGTGACCGTT ACTCAGACGACGACCGTGTTTGGCAATAATGCTGCCTCCGCTACCGGAGCATTCGGCCAGAGCAATGCCTTTGGG GCCAACAACGGCAACAACTTCAACAACGGGAACAATTTCAACAACGGAAATAACGGGAACCTCTTCAACAGCGGC AACAGCGGCGGCCTGGGCAACCTAGGCAACGTCAATGGCAACAACTTCAATGCCAACAACAACCTGGCAAACAGT GCCCCGGCCAAGACCATCATCATCACGGGAGCCAGCGTAAACGGCGGGAACGTCGCTAACGGCGCCAGCCTCAAC AACGTCGGCACAGGCGGCACAGGCGGCACCGTCATCGTCTCCAGCCAGAGGCAAACCGGCGGCACCTTGAACAAC GTGGGCAGCGCAGGCAACAGCGCCGTCATCATATCCAGCCAGAAACAAAACAACGGCATAAACACCGTCGGTGGC ACGGGCGGCACCGTCCTCGTATCCAGCCAGAAACAAGGCGTCGGCAGCAACGTCGGCCTCGTCAACGGCGTCGGC AGCAACCAAGGCAGCAACCAAGGCGTCGAGATCATCAACCTCGCCGGCGTAAACTCCATCAACAACGGCATCAGA GCCGTCGACGGCCAGAACCAATGCGTCATCAATGGTGTCGTCATGGGTGTTCTTCAGGAACAGAGGGGGGAGAAG GGCAAGGAGGCTCCTGCGGCCAAAACGATCCCTCTGTCCGATATTGGTCTCGGAAACGCTGCCACAACGACGAGA TCGCAAACAACGGCAGCGACAACTCCCCATCACCCCTCCCCTCCGCCCCAACAACAACAACAACAGCAACAACAA CAACAGCAACAACAACAACAGCAACAACCCCAACAACCCCAACAACAAAGACAACAACCTCCTCCCTCCGCCCCA AGCCCAACCAAAAGCCGAACCCCCCCAGCCCAACCAGCCCAGTCAACAACCGCCGCCGCCGCAGCACCACCCCCT GCCAACTCGGCCGCCGCCGACCCCAAAAACACGGTGCTGAAATCCGGGCTTGATTTGGGGGCTCTGGCGCCCGAG TGA |
Gene | >Ophcf2|03308 ATGCATCGTCTCGAGGCCTGGATCGTCCTGGCGGCATACCTTGGTGTGCTGGTAAGCGACCCTCACAACACGGCG TCGCGTTCTCTTGGCTGACTCTTGGATCAGGTCACTGGGCTCGCGTATGAAAGGCAAGAGCACAGTCTGTTTGCG AGACATGGCGTCCGCGGGGGTCCCGCGAAAGTGGCGCAGGTCTTTTCCGCAAAGATGGGCAAGGCTCGCGGGATG AGCAAGGACAACGCGAACAAGAATCAGAACTTGAACGACAACAATGCCAACAAAGATCAGGGCCTAAACAACAAC AACAACAACTTCGACAACAACAACAACAACAACAACAACAACTTCAACGATAACAATAACAACAACGGAAACAAC TTTAATAGCAACGCGAATAACGGCAACGGCAACAATGGCAATAATTTCAACAACAACAATGACAACTTCAACGGC AACAATGGCAATGGGATCAACTTTAACAACGGTAACGGCAATGGCAATGGCAATGGAAACGACTTCAACAACGCC GCCGTGACGCAGGCTGTCGGTGGAGTAAGAGCCGCAAGCTTCCATCATGTGAACGCATATGCTGACAAGACACAG TCCAACCAGCAGACCGTCACGGTGACCGTTACTCAGACGACGACCGTGTTTGGCAATAATGTACGTGGCCAACGT GTCTTGCTGTCTCAGAAGCGTGCTGACTGTTGAGAATTAGGCTGCCTCCGCTACCGGAGCATTCGGCCAGAGCAA TGCCTTTGGGGCCAACAACGGCAACAACTTCAACAACGGGAACAATTTCAACAACGGAAATAACGGGAACCTCTT CAACAGCGGCAACAGCGGCGGCCTGGGCAACCTAGGCAACGTCAATGGCAACAACTTCAATGCCAACAACAACCT GGCAAACAGTGCCCCGGCCAAGACCATCATCATCACGGGAGCCAGCGTAAACGGCGGGAACGTCGCTAACGGCGC CAGCCTCAACAACGTCGGCACAGGCGGCACAGGCGGCACCGTCATCGTCTCCAGCCAGAGGCAAACCGGCGGCAC CTTGAACAACGTGGGCAGCGCAGGCAACAGCGCCGTCATCATATCCAGCCAGAAACAAAACAACGGCATAAACAC CGTCGGTGGCACGGGCGGCACCGTCCTCGTATCCAGCCAGAAACAAGGCGTCGGCAGCAACGTCGGCCTCGTCAA CGGCGTCGGCAGCAACCAAGGCAGCAACCAAGGCGTCGAGATCATCAACCTCGCCGGCGTAAACTCCATCAACAA CGGCATCAGAGCCGTCGACGGCCAGAACCAATGCGTCATCAATGGTGTCGTCATGGGTGTTCTTCAGGAACAGAG GGGGGAGAAGGGCAAGGAGGCTCCTGCGGCCAAAACGATCCCTCTGTCCGATATTGGTCTCGGAAACGCTGCCAC AACGACGAGATCGCAAACAACGGCAGCGACAACTCCCCATCACCCCTCCCCTCCGCCCCAACAACAACAACAACA GCAACAACAACAACAGCAACAACAACAACAGCAACAACCCCAACAACCCCAACAACAAAGACAACAACCTCCTCC CTCCGCCCCAAGCCCAACCAAAAGCCGAACCCCCCCAGCCCAACCAGCCCAGTCAACAACCGCCGCCGCCGCAGC ACCACCCCCTGCCAACTCGGCCGCCGCCGACCCCAAAAACACGGTGCTGAAATCCGGGCTTGATTTGGGGGCTCT GGCGCCCGAGTGA |