Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03301
Gene name
Locationscaffold_03:2294371..2295485
Strand-
Gene length (bp)1114
Transcript length (bp)1038
Coding sequence length (bp)1038
Protein length (aa) 346

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.45

Transmembrane Domains

Domain # Start End Length
1 121 143 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03301
MRTMSIITQYNDAYNPGALPKGPLRVPRRQSRREPFHHQSPYVSPEPSLSTEKESVGADRDFPGVKGFVGAETED
LERRTASLPRLATASVGSSRSCSSNSGTVRQDDKGLFAHRRRAGRFLVLVAVIAIVIVALAVGLAVGLRRNTDSS
SGSASMPSNADFPAGSYSFNANVKTTETGCTSQASTWRCASSTSGSSPAANWDIRPRGNGAYTISSPTASDLNPP
FTDIALRILDANHPTERLVFTLPFNKTVTPAASSLPPTRAAKCTYQDVQLEATLYTRRRSGRAMAASSRLGQGMD
WPGDVEITQHMPSTIGQPTCSDANGIQIADVQAAQGDCSCVYTNN*
Coding >Ophcf2|03301
ATGCGAACAATGTCCATCATAACCCAGTACAACGACGCCTACAACCCGGGCGCCCTACCCAAAGGCCCTCTCCGG
GTTCCCAGGAGACAGTCTCGTCGGGAACCCTTCCATCACCAGTCTCCCTACGTCTCGCCCGAGCCCAGCCTCAGC
ACGGAGAAGGAGAGCGTCGGCGCCGACAGGGACTTTCCCGGCGTGAAGGGCTTTGTTGGCGCTGAGACGGAGGAT
TTGGAGCGTCGGACGGCTTCGCTTCCTCGGTTGGCTACGGCCAGTGTCGGGAGTAGCAGGAGTTGCAGCAGCAAT
AGCGGTACCGTTCGCCAGGATGACAAGGGTCTTTTCGCTCACAGGAGGAGAGCGGGCCGGTTTCTGGTCCTCGTT
GCTGTCATTGCCATTGTCATCGTCGCCTTGGCTGTTGGACTCGCAGTCGGACTAAGAAGAAACACCGATTCATCC
AGCGGCAGCGCTTCCATGCCATCAAACGCAGATTTCCCCGCCGGATCGTACTCTTTCAACGCAAACGTCAAGACC
ACCGAAACAGGCTGCACATCCCAAGCCTCAACCTGGCGCTGCGCCTCCTCCACCAGCGGTTCCTCGCCAGCAGCA
AACTGGGATATCCGACCTCGAGGAAACGGAGCCTACACCATCTCTTCACCCACCGCGAGCGATCTGAACCCGCCC
TTCACCGACATCGCCCTCCGGATCCTCGACGCCAACCATCCAACAGAGCGTCTCGTCTTCACCCTCCCCTTCAAC
AAGACCGTCACTCCAGCTGCCAGCAGCTTGCCTCCCACCCGCGCCGCAAAATGCACCTATCAAGACGTTCAGCTC
GAGGCAACGCTATACACGCGCCGACGCAGCGGACGGGCCATGGCTGCTTCCAGTCGGTTGGGCCAGGGCATGGAC
TGGCCAGGCGACGTCGAAATCACTCAGCATATGCCCTCGACCATCGGCCAGCCTACCTGCTCCGACGCGAATGGC
ATTCAGATTGCCGACGTTCAGGCCGCTCAGGGGGATTGCAGCTGCGTCTACACTAACAATTGA
Transcript >Ophcf2|03301
ATGCGAACAATGTCCATCATAACCCAGTACAACGACGCCTACAACCCGGGCGCCCTACCCAAAGGCCCTCTCCGG
GTTCCCAGGAGACAGTCTCGTCGGGAACCCTTCCATCACCAGTCTCCCTACGTCTCGCCCGAGCCCAGCCTCAGC
ACGGAGAAGGAGAGCGTCGGCGCCGACAGGGACTTTCCCGGCGTGAAGGGCTTTGTTGGCGCTGAGACGGAGGAT
TTGGAGCGTCGGACGGCTTCGCTTCCTCGGTTGGCTACGGCCAGTGTCGGGAGTAGCAGGAGTTGCAGCAGCAAT
AGCGGTACCGTTCGCCAGGATGACAAGGGTCTTTTCGCTCACAGGAGGAGAGCGGGCCGGTTTCTGGTCCTCGTT
GCTGTCATTGCCATTGTCATCGTCGCCTTGGCTGTTGGACTCGCAGTCGGACTAAGAAGAAACACCGATTCATCC
AGCGGCAGCGCTTCCATGCCATCAAACGCAGATTTCCCCGCCGGATCGTACTCTTTCAACGCAAACGTCAAGACC
ACCGAAACAGGCTGCACATCCCAAGCCTCAACCTGGCGCTGCGCCTCCTCCACCAGCGGTTCCTCGCCAGCAGCA
AACTGGGATATCCGACCTCGAGGAAACGGAGCCTACACCATCTCTTCACCCACCGCGAGCGATCTGAACCCGCCC
TTCACCGACATCGCCCTCCGGATCCTCGACGCCAACCATCCAACAGAGCGTCTCGTCTTCACCCTCCCCTTCAAC
AAGACCGTCACTCCAGCTGCCAGCAGCTTGCCTCCCACCCGCGCCGCAAAATGCACCTATCAAGACGTTCAGCTC
GAGGCAACGCTATACACGCGCCGACGCAGCGGACGGGCCATGGCTGCTTCCAGTCGGTTGGGCCAGGGCATGGAC
TGGCCAGGCGACGTCGAAATCACTCAGCATATGCCCTCGACCATCGGCCAGCCTACCTGCTCCGACGCGAATGGC
ATTCAGATTGCCGACGTTCAGGCCGCTCAGGGGGATTGCAGCTGCGTCTACACTAACAATTGA
Gene >Ophcf2|03301
ATGCGAACAATGTCCATCATAACCCAGTACAACGACGCCTACAACCCGGGCGCCCTACCCAAAGGCCCTCTCCGG
GTTCCCAGGAGACAGTCTCGTCGGGAACCCTTCCATCACCAGTCTCCCTACGTCTCGCCCGAGCCCAGCCTCAGC
ACGGAGAAGGAGAGCGTCGGCGCCGACAGGGACTTTCCCGGCGTGAAGGGCTTTGTTGGCGCTGAGACGGAGGAT
TTGGAGCGTCGGACGGCTTCGCTTCCTCGGTTGGCTACGGCCAGTGTCGGGAGTAGCAGGAGTTGCAGCAGCAAT
AGCGGTACCGTTCGCCAGGATGACAAGGGTCTTTTCGCTCACAGGAGGAGAGCGGGCCGGTTTCTGGTCCTCGTT
GCTGTCATTGCCATTGTCATCGTCGCCTTGGCTGTTGGACTCGCAGTCGGACTAAGAAGAAAGTGAGTACGAAGA
TGTGGTTCATGATCACAAACCCCCGGTCCACCACCGAGAGCATCGTGACTGACTTATCAACAGCACCGATTCATC
CAGCGGCAGCGCTTCCATGCCATCAAACGCAGATTTCCCCGCCGGATCGTACTCTTTCAACGCAAACGTCAAGAC
CACCGAAACAGGCTGCACATCCCAAGCCTCAACCTGGCGCTGCGCCTCCTCCACCAGCGGTTCCTCGCCAGCAGC
AAACTGGGATATCCGACCTCGAGGAAACGGAGCCTACACCATCTCTTCACCCACCGCGAGCGATCTGAACCCGCC
CTTCACCGACATCGCCCTCCGGATCCTCGACGCCAACCATCCAACAGAGCGTCTCGTCTTCACCCTCCCCTTCAA
CAAGACCGTCACTCCAGCTGCCAGCAGCTTGCCTCCCACCCGCGCCGCAAAATGCACCTATCAAGACGTTCAGCT
CGAGGCAACGCTATACACGCGCCGACGCAGCGGACGGGCCATGGCTGCTTCCAGTCGGTTGGGCCAGGGCATGGA
CTGGCCAGGCGACGTCGAAATCACTCAGCATATGCCCTCGACCATCGGCCAGCCTACCTGCTCCGACGCGAATGG
CATTCAGATTGCCGACGTTCAGGCCGCTCAGGGGGATTGCAGCTGCGTCTACACTAACAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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