Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03293
Gene name
Locationscaffold_03:2278373..2278969
Strand-
Gene length (bp)596
Transcript length (bp)483
Coding sequence length (bp)483
Protein length (aa) 161

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08592 Anthrone_oxy Anthrone oxygenase 6.3E-23 49 150

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 52 74 22
3 84 106 22
4 134 156 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03293
MQFPAPPLIAVATGIVGSAWASGAIVTFSISAAAVTKAAPDVITTAHCWRELYGLGASLMPKVAITVALSYAYAA
YDVFGRGGRWTGFAAAACTTLSIVPFTLMVMKNTNAELHQAAVNTPDAARLSSLMDTWISLNFARGLLPLVGTVL
GIQSFLDNTL*
Coding >Ophcf2|03293
ATGCAATTCCCAGCACCGCCACTCATCGCCGTCGCCACCGGCATCGTCGGCTCAGCCTGGGCATCCGGCGCTATC
GTCACGTTCTCCATCTCTGCCGCGGCTGTGACGAAAGCCGCACCCGACGTCATCACCACCGCTCACTGCTGGCGC
GAGCTTTACGGCCTCGGCGCCAGCCTCATGCCGAAAGTCGCCATCACTGTCGCCCTGTCGTACGCCTACGCTGCC
TATGATGTCTTTGGTCGTGGCGGTCGCTGGACTGGCTTCGCCGCCGCCGCCTGTACTACTCTCTCAATCGTCCCC
TTCACCCTGATGGTCATGAAGAATACCAACGCCGAGCTGCATCAGGCTGCAGTCAATACGCCTGATGCAGCCCGC
TTGTCCAGCTTGATGGACACCTGGATCAGCCTCAACTTTGCACGCGGACTTCTGCCTCTCGTCGGTACCGTCCTG
GGTATTCAGTCATTTCTCGACAACACTCTGTAG
Transcript >Ophcf2|03293
ATGCAATTCCCAGCACCGCCACTCATCGCCGTCGCCACCGGCATCGTCGGCTCAGCCTGGGCATCCGGCGCTATC
GTCACGTTCTCCATCTCTGCCGCGGCTGTGACGAAAGCCGCACCCGACGTCATCACCACCGCTCACTGCTGGCGC
GAGCTTTACGGCCTCGGCGCCAGCCTCATGCCGAAAGTCGCCATCACTGTCGCCCTGTCGTACGCCTACGCTGCC
TATGATGTCTTTGGTCGTGGCGGTCGCTGGACTGGCTTCGCCGCCGCCGCCTGTACTACTCTCTCAATCGTCCCC
TTCACCCTGATGGTCATGAAGAATACCAACGCCGAGCTGCATCAGGCTGCAGTCAATACGCCTGATGCAGCCCGC
TTGTCCAGCTTGATGGACACCTGGATCAGCCTCAACTTTGCACGCGGACTTCTGCCTCTCGTCGGTACCGTCCTG
GGTATTCAGTCATTTCTCGACAACACTCTGTAG
Gene >Ophcf2|03293
ATGCAATTCCCAGCACCGCCACTCATCGCCGTCGCCACCGGCATCGTCGGCTCAGCCTGGGCATCCGGTACGTTC
CTCCGCGGCTTACACCTGTCTGAGGCCGTCTCCCTTCCCTACACCCGGGCCGTCTCTGCGAGTCTCCAGCTGACA
GACTGATCGGTCCTCCCACACGCTGATCAGGCGCTATCGTCACGTTCTCCATCTCTGCCGCGGCTGTGACGAAAG
CCGCACCCGACGTCATCACCACCGCTCACTGCTGGCGCGAGCTTTACGGCCTCGGCGCCAGCCTCATGCCGAAAG
TCGCCATCACTGTCGCCCTGTCGTACGCCTACGCTGCCTATGATGTCTTTGGTCGTGGCGGTCGCTGGACTGGCT
TCGCCGCCGCCGCCTGTACTACTCTCTCAATCGTCCCCTTCACCCTGATGGTCATGAAGAATACCAACGCCGAGC
TGCATCAGGCTGCAGTCAATACGCCTGATGCAGCCCGCTTGTCCAGCTTGATGGACACCTGGATCAGCCTCAACT
TTGCACGCGGACTTCTGCCTCTCGTCGGTACCGTCCTGGGTATTCAGTCATTTCTCGACAACACTCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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