© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03284 |
| Gene name | |
| Location | scaffold_03:2159459..2161254 |
| Strand | - |
| Gene length (bp) | 1795 |
| Transcript length (bp) | 1683 |
| Coding sequence length (bp) | 1683 |
| Protein length (aa) | 561 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 5.6E-112 | 40 | 489 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.8E-16 | 84 | 239 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.9E-09 | 309 | 479 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 37 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 87 | 109 | 22 |
| 3 | 116 | 138 | 22 |
| 4 | 174 | 196 | 22 |
| 5 | 203 | 225 | 22 |
| 6 | 360 | 377 | 17 |
| 7 | 390 | 412 | 22 |
| 8 | 427 | 449 | 22 |
| 9 | 456 | 475 | 19 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 20.76 | 10.37 | 31.16 |
| Alive | In ants, during behavior modification | 24.77 | 12.80 | 36.75 |
| Dead | In ants, recently dead | 34.06 | 18.74 | 49.38 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.464107 | no |
| Alive | Dead | 0.067963 | no |
| Dead | Fungus | 0.013485 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03284 MASSRSSSSRSNRNRSRYLLGLRGDGLNWAIGAVAGCDFLLFGYDQGVMGGILTLPVFLTQFPDINDKDPAIAHS HELQSRRSTNQGIAVASYNLGCFAGAVLTIFVGNPLGRRRVIFLGTALMIFGAALQASASSLTHFIAGRVITGLG NGANTSTVPMWQSETCAPHKRGRFVMIEGALITGGIMISYWVDLGLSFASGSIAWRFPLAFQVVFCVFILALVLT LPESPRWLVLKDRDDEARHAIAAVAAVDEHDAYVDNELLAIRATLDELSKGTYAELFALDKKRTLHRTVLAYMNQ MFQQISGINLITYYAAKIYSDLGMSPFLSRLLAALNGTEYFIASWPAVCLIERVGRRKLMIFGAAGQAATMAVLA GVNSRPQDKACQVAAIVFLFVFNTFFAVGWLGMTWLYPAEITPLRTRAPANALSTSSNWIFNFLVVMITPIAFQN IQYKTYVVFAVINAFMVPFVYFFFPETAYRSLEEMDTIFEKVSGWRGVLDVVEQARIEPRRYGKKGELLLVVDDA GEDVGAGKISDGSGDKPVLATVSPLLLEKKTERTG* |
| Coding | >Ophcf2|03284 ATGGCCAGCAGCAGAAGCAGCAGCAGCAGAAGCAATAGGAACAGAAGCAGATATCTACTTGGCCTTCGAGGTGAT GGCCTCAACTGGGCCATCGGTGCCGTCGCCGGCTGTGATTTCCTCCTCTTCGGATACGACCAGGGCGTCATGGGA GGAATCCTGACCCTCCCCGTCTTCCTCACCCAATTCCCCGACATAAACGACAAAGACCCAGCCATAGCCCACAGC CACGAGCTACAATCCCGCCGATCAACGAACCAAGGCATCGCCGTGGCGTCGTACAACCTGGGCTGCTTCGCCGGC GCCGTCCTTACAATCTTCGTCGGTAACCCCCTCGGTCGACGGCGCGTCATCTTCCTCGGCACCGCGCTCATGATC TTCGGCGCGGCTCTGCAGGCGTCGGCCTCGTCTCTGACGCACTTTATCGCCGGGCGTGTCATTACGGGGTTGGGG AATGGGGCGAATACTTCGACGGTTCCTATGTGGCAGTCTGAGACTTGCGCGCCGCACAAGCGCGGCAGGTTTGTC ATGATTGAAGGCGCTCTTATTACGGGGGGCATCATGATCTCTTACTGGGTTGACCTTGGTCTTTCGTTCGCTTCG GGTTCCATTGCTTGGCGGTTTCCGCTCGCCTTTCAGGTCGTCTTCTGCGTCTTCATTCTTGCTCTGGTCTTGACT CTGCCTGAGTCTCCGCGCTGGCTTGTCCTCAAAGACCGAGACGATGAGGCTCGCCATGCCATTGCCGCCGTCGCC GCCGTTGATGAGCATGATGCTTATGTCGACAATGAGCTGCTTGCCATTCGGGCTACCCTCGATGAGTTGAGCAAG GGAACCTATGCCGAGCTGTTCGCCCTCGATAAGAAGCGTACTCTTCACCGCACCGTCCTTGCCTACATGAACCAG ATGTTCCAGCAGATATCCGGCATCAATCTCATCACATACTACGCCGCCAAGATCTACTCGGACCTCGGCATGTCT CCTTTCCTATCCCGGCTGCTGGCCGCTCTCAACGGAACAGAGTACTTCATCGCCTCCTGGCCCGCCGTGTGTCTC ATCGAGCGCGTCGGCCGTCGCAAGCTCATGATCTTCGGCGCTGCTGGCCAGGCCGCCACTATGGCTGTCTTGGCC GGCGTCAACTCGAGACCTCAAGACAAGGCCTGCCAGGTCGCTGCCATTGTCTTTCTCTTCGTCTTCAACACCTTT TTCGCTGTCGGCTGGCTTGGTATGACGTGGCTCTATCCGGCGGAGATTACGCCGCTGCGTACTCGAGCCCCTGCA AACGCCTTGTCGACGTCTTCCAACTGGATCTTCAATTTTCTGGTCGTCATGATCACGCCCATTGCCTTTCAGAAT ATCCAGTACAAGACATACGTCGTATTCGCCGTCATCAACGCCTTCATGGTACCGTTCGTCTACTTCTTCTTCCCG GAGACGGCATACCGATCACTGGAAGAAATGGACACCATCTTCGAAAAGGTCTCAGGCTGGCGAGGCGTCTTGGAC GTGGTCGAGCAGGCGAGAATCGAGCCGCGTCGGTACGGTAAGAAGGGAGAATTGCTCCTTGTCGTGGACGATGCT GGCGAGGACGTAGGAGCTGGGAAGATTAGCGATGGCTCTGGTGATAAGCCTGTGCTTGCCACCGTCTCGCCATTG CTGCTTGAGAAGAAGACGGAAAGGACAGGATAA |
| Transcript | >Ophcf2|03284 ATGGCCAGCAGCAGAAGCAGCAGCAGCAGAAGCAATAGGAACAGAAGCAGATATCTACTTGGCCTTCGAGGTGAT GGCCTCAACTGGGCCATCGGTGCCGTCGCCGGCTGTGATTTCCTCCTCTTCGGATACGACCAGGGCGTCATGGGA GGAATCCTGACCCTCCCCGTCTTCCTCACCCAATTCCCCGACATAAACGACAAAGACCCAGCCATAGCCCACAGC CACGAGCTACAATCCCGCCGATCAACGAACCAAGGCATCGCCGTGGCGTCGTACAACCTGGGCTGCTTCGCCGGC GCCGTCCTTACAATCTTCGTCGGTAACCCCCTCGGTCGACGGCGCGTCATCTTCCTCGGCACCGCGCTCATGATC TTCGGCGCGGCTCTGCAGGCGTCGGCCTCGTCTCTGACGCACTTTATCGCCGGGCGTGTCATTACGGGGTTGGGG AATGGGGCGAATACTTCGACGGTTCCTATGTGGCAGTCTGAGACTTGCGCGCCGCACAAGCGCGGCAGGTTTGTC ATGATTGAAGGCGCTCTTATTACGGGGGGCATCATGATCTCTTACTGGGTTGACCTTGGTCTTTCGTTCGCTTCG GGTTCCATTGCTTGGCGGTTTCCGCTCGCCTTTCAGGTCGTCTTCTGCGTCTTCATTCTTGCTCTGGTCTTGACT CTGCCTGAGTCTCCGCGCTGGCTTGTCCTCAAAGACCGAGACGATGAGGCTCGCCATGCCATTGCCGCCGTCGCC GCCGTTGATGAGCATGATGCTTATGTCGACAATGAGCTGCTTGCCATTCGGGCTACCCTCGATGAGTTGAGCAAG GGAACCTATGCCGAGCTGTTCGCCCTCGATAAGAAGCGTACTCTTCACCGCACCGTCCTTGCCTACATGAACCAG ATGTTCCAGCAGATATCCGGCATCAATCTCATCACATACTACGCCGCCAAGATCTACTCGGACCTCGGCATGTCT CCTTTCCTATCCCGGCTGCTGGCCGCTCTCAACGGAACAGAGTACTTCATCGCCTCCTGGCCCGCCGTGTGTCTC ATCGAGCGCGTCGGCCGTCGCAAGCTCATGATCTTCGGCGCTGCTGGCCAGGCCGCCACTATGGCTGTCTTGGCC GGCGTCAACTCGAGACCTCAAGACAAGGCCTGCCAGGTCGCTGCCATTGTCTTTCTCTTCGTCTTCAACACCTTT TTCGCTGTCGGCTGGCTTGGTATGACGTGGCTCTATCCGGCGGAGATTACGCCGCTGCGTACTCGAGCCCCTGCA AACGCCTTGTCGACGTCTTCCAACTGGATCTTCAATTTTCTGGTCGTCATGATCACGCCCATTGCCTTTCAGAAT ATCCAGTACAAGACATACGTCGTATTCGCCGTCATCAACGCCTTCATGGTACCGTTCGTCTACTTCTTCTTCCCG GAGACGGCATACCGATCACTGGAAGAAATGGACACCATCTTCGAAAAGGTCTCAGGCTGGCGAGGCGTCTTGGAC GTGGTCGAGCAGGCGAGAATCGAGCCGCGTCGGTACGGTAAGAAGGGAGAATTGCTCCTTGTCGTGGACGATGCT GGCGAGGACGTAGGAGCTGGGAAGATTAGCGATGGCTCTGGTGATAAGCCTGTGCTTGCCACCGTCTCGCCATTG CTGCTTGAGAAGAAGACGGAAAGGACAGGATAA |
| Gene | >Ophcf2|03284 ATGGCCAGCAGCAGAAGCAGCAGCAGCAGAAGCAATAGGAACAGAAGCAGATATCTACTTGGCCTTCGAGGTGAT GGCCTCAACTGGGCCATCGGTGCCGTCGCCGGCTGTGATTTCCTCCTCTTCGGATACGGTAGCCATCCTCCAAAA CAAGATACTGATCAAAACGACTCACGATCGCAAGACCAGGGCGTCATGGGAGGAATCCTGACCCTCCCCGTCTTC CTCACCCAATTCCCCGACATAAACGACAAAGACCCAGCCATAGCCCACAGCCACGAGCTACAATCCCGCCGATCA ACGAACCAAGGCATCGCCGTGGCGTCGTACAACCTGGGCTGCTTCGCCGGCGCCGTCCTTACAATCTTCGTCGGT AACCCCCTCGGTCGACGGCGCGTCATCTTCCTCGGCACCGCGCTCATGATCTTCGGCGCGGCTCTGCAGGCGTCG GCCTCGTCTCTGACGCACTTTATCGCCGGGCGTGTCATTACGGGGTTGGGGAATGGGGCGAATACTTCGACGGTT CCTATGTGGCAGTCTGAGACTTGCGCGCCGCACAAGCGCGGCAGGTTTGTCATGATTGAAGGCGCTCTTATTACG GGGGGCATCATGATCTCTTACTGGGTTGACCTTGGTCTTTCGTTCGCTTCGGGTTCCATTGCTTGGCGGTTTCCG CTCGCCTTTCAGGTCGTCTTCTGCGTCTTCATTCTTGCTCTGGTCTTGACTCTGCCTGAGTCTCCGCGCTGGCTT GTCCTCAAAGACCGAGACGATGAGGCTCGCCATGCCATTGCCGCCGTCGCCGCCGTTGATGAGCATGATGCTTAT GTCGACAATGAGCTGCTTGCCATTCGGGCTACCCTCGATGAGTTGAGCAAGGGAACCTATGCCGAGCTGTTCGCC CTCGATAAGAAGCGTACTCTTCACCGCACCGTCCTTGCCTACATGAACCAGATGTTCCAGCAGATATCCGGCATC AATCTCATCACATACTACGCCGCCAAGATCTACTCGGACCTCGGCATGTCTCCTTTCCTATCCCGGCTGCTGGCC GCTCTCAACGGAACAGAGTACTTCATCGCCTCCTGGCCCGCCGTGTGTCTCATCGAGCGCGTCGGCCGTCGCAAG CTCATGATCTTCGGCGCTGCTGGCCAGGCCGCCACTATGGCTGTCTTGGCCGGCGTCAACTCGAGACCTCAAGAC AAGGCCTGCCAGGTCGCTGCCATTGTCTTTCTCTTCGTCTTCAACACCTTTTTCGCTGTCGGCTGGCTTGGTATG ACGTGGCTCTATCCGGCGGAGATTACGCCGCTGCGTACTCGAGCCCCTGCAAACGCCTTGTCGACGTCTTCCAAC TGGATCTTCAATTTTCTGGTTAGTCGGAAGAGTGTGAGTTTCGTCTGCGTGACAGCTGACGAATAGGAACATGAA AAAGGTCGTCATGATCACGCCCATTGCCTTTCAGAATATCCAGTACAAGACATACGTCGTATTCGCCGTCATCAA CGCCTTCATGGTACCGTTCGTCTACTTCTTCTTCCCGGAGACGGCATACCGATCACTGGAAGAAATGGACACCAT CTTCGAAAAGGTCTCAGGCTGGCGAGGCGTCTTGGACGTGGTCGAGCAGGCGAGAATCGAGCCGCGTCGGTACGG TAAGAAGGGAGAATTGCTCCTTGTCGTGGACGATGCTGGCGAGGACGTAGGAGCTGGGAAGATTAGCGATGGCTC TGGTGATAAGCCTGTGCTTGCCACCGTCTCGCCATTGCTGCTTGAGAAGAAGACGGAAAGGACAGGATAA |