Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03260
Gene name
Locationscaffold_03:1522204..1523829
Strand+
Gene length (bp)1625
Transcript length (bp)1569
Coding sequence length (bp)1569
Protein length (aa) 523

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00226 DnaJ DnaJ domain 3.9E-21 404 470
PF14559 TPR_19 Tetratricopeptide repeat 5.5E-08 327 392
PF13181 TPR_8 Tetratricopeptide repeat 9.1E-02 330 347

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03260
MRFQLSNLAVTAGLLASTGIALSSHDIPADLPASALLTSAQAHLANGETNEALVYFDAAVGKDPSNYLTLFKRAT
TYLSLGRTAHATQDFERVLVLEPRFEGAHLQLAKIFSKAARWNSARVEFEAAGKRSDSPELVELAEAEGAARLVD
DAVRAAKWDECVNQAGVAILVASRCAALRQTRARCRFERGEIEEGMGDLHHVLQMRPGDTYPHVLISATAFYALA
DLDNGLAQIRKCLHSDPDSDICKKIHRQQKAIQKTLRNAESQLRKGQSTAAGRTLGGNPNEPGLVTTVRDQIKVL
RQHGNIPFKAKAALYDKLVDMTCQAYIESNHKDAIKYCEQALELDPDSFWGLLYRGKTLLKKDQFEAAIGFLNKA
AEIRPDRQEKVKSLLNKAQAALRRSKTKDYYKVLGVPRDADQRHIKSAYRKASKLHHPDKAAKQGISKEEAEKKM
AAINEAYEVLSDPELRQRFDNGDDPNSQEKANPFQGSPFGGPNPFIFRQQGGPGGSQANFKFHFGGGGPFGF*
Coding >Ophcf2|03260
ATGCGCTTCCAGCTCTCCAACCTGGCCGTGACAGCCGGCCTGCTGGCCTCTACCGGCATCGCGCTGTCCTCGCAC
GACATTCCTGCAGATCTTCCTGCATCAGCCCTCCTGACGTCTGCTCAGGCTCATCTGGCCAACGGCGAGACCAAC
GAAGCCCTCGTATATTTCGATGCTGCTGTCGGCAAGGACCCGAGCAACTACCTAACGCTCTTCAAGCGCGCCACC
ACCTACCTATCTCTTGGCCGCACTGCACATGCTACTCAGGATTTCGAAAGGGTTCTTGTACTCGAGCCGCGCTTC
GAAGGCGCTCATCTGCAGCTGGCCAAGATATTCTCCAAGGCCGCCAGGTGGAACAGTGCCAGGGTTGAATTTGAG
GCCGCCGGCAAGCGCTCCGACTCGCCCGAGCTCGTTGAGCTGGCCGAGGCGGAGGGGGCTGCTAGGCTCGTCGAC
GATGCCGTCAGGGCAGCCAAATGGGATGAGTGCGTTAACCAGGCTGGCGTCGCCATCCTCGTCGCCTCGAGATGC
GCAGCCCTGCGCCAGACACGCGCCCGCTGCCGCTTCGAGCGCGGCGAGATCGAAGAAGGAATGGGGGATTTGCAC
CACGTACTTCAGATGAGGCCGGGCGATACGTACCCTCACGTCCTTATTTCGGCCACCGCCTTTTACGCACTGGCA
GACTTGGATAATGGCCTAGCGCAGATTCGGAAATGCCTACACTCAGATCCAGATTCCGACATATGTAAAAAGATA
CATCGCCAACAAAAGGCCATTCAAAAGACTCTGCGCAATGCCGAAAGCCAGCTCAGAAAGGGGCAGTCGACGGCG
GCCGGCCGGACCCTAGGGGGCAACCCAAACGAGCCTGGTCTAGTCACCACTGTCAGAGATCAGATAAAAGTGTTG
CGCCAACACGGCAATATACCCTTCAAGGCTAAGGCTGCGCTATATGACAAGCTCGTCGACATGACGTGCCAAGCC
TATATTGAATCAAACCACAAAGACGCCATAAAGTACTGCGAACAAGCCCTGGAACTCGACCCGGATTCCTTTTGG
GGCCTCCTCTACCGTGGCAAGACGCTTTTGAAAAAGGACCAGTTCGAAGCGGCCATCGGCTTCTTAAATAAGGCC
GCCGAGATACGGCCCGATCGCCAGGAGAAGGTGAAATCACTCTTGAACAAGGCGCAGGCCGCCCTACGACGAAGT
AAGACCAAGGACTACTACAAGGTCCTCGGCGTGCCGAGAGACGCCGATCAGCGACACATCAAGTCAGCCTACCGC
AAGGCCTCCAAGCTCCACCACCCGGATAAGGCGGCTAAGCAAGGCATCAGCAAGGAAGAGGCAGAGAAGAAGATG
GCGGCCATCAACGAGGCCTATGAAGTCCTGAGCGACCCGGAGCTACGCCAACGCTTCGACAATGGCGACGACCCC
AACTCGCAGGAGAAGGCCAATCCCTTCCAGGGTAGTCCCTTTGGCGGACCAAATCCTTTCATCTTTCGTCAGCAA
GGCGGACCTGGCGGTTCCCAAGCGAATTTCAAGTTTCACTTTGGTGGTGGCGGCCCATTTGGATTTTAG
Transcript >Ophcf2|03260
ATGCGCTTCCAGCTCTCCAACCTGGCCGTGACAGCCGGCCTGCTGGCCTCTACCGGCATCGCGCTGTCCTCGCAC
GACATTCCTGCAGATCTTCCTGCATCAGCCCTCCTGACGTCTGCTCAGGCTCATCTGGCCAACGGCGAGACCAAC
GAAGCCCTCGTATATTTCGATGCTGCTGTCGGCAAGGACCCGAGCAACTACCTAACGCTCTTCAAGCGCGCCACC
ACCTACCTATCTCTTGGCCGCACTGCACATGCTACTCAGGATTTCGAAAGGGTTCTTGTACTCGAGCCGCGCTTC
GAAGGCGCTCATCTGCAGCTGGCCAAGATATTCTCCAAGGCCGCCAGGTGGAACAGTGCCAGGGTTGAATTTGAG
GCCGCCGGCAAGCGCTCCGACTCGCCCGAGCTCGTTGAGCTGGCCGAGGCGGAGGGGGCTGCTAGGCTCGTCGAC
GATGCCGTCAGGGCAGCCAAATGGGATGAGTGCGTTAACCAGGCTGGCGTCGCCATCCTCGTCGCCTCGAGATGC
GCAGCCCTGCGCCAGACACGCGCCCGCTGCCGCTTCGAGCGCGGCGAGATCGAAGAAGGAATGGGGGATTTGCAC
CACGTACTTCAGATGAGGCCGGGCGATACGTACCCTCACGTCCTTATTTCGGCCACCGCCTTTTACGCACTGGCA
GACTTGGATAATGGCCTAGCGCAGATTCGGAAATGCCTACACTCAGATCCAGATTCCGACATATGTAAAAAGATA
CATCGCCAACAAAAGGCCATTCAAAAGACTCTGCGCAATGCCGAAAGCCAGCTCAGAAAGGGGCAGTCGACGGCG
GCCGGCCGGACCCTAGGGGGCAACCCAAACGAGCCTGGTCTAGTCACCACTGTCAGAGATCAGATAAAAGTGTTG
CGCCAACACGGCAATATACCCTTCAAGGCTAAGGCTGCGCTATATGACAAGCTCGTCGACATGACGTGCCAAGCC
TATATTGAATCAAACCACAAAGACGCCATAAAGTACTGCGAACAAGCCCTGGAACTCGACCCGGATTCCTTTTGG
GGCCTCCTCTACCGTGGCAAGACGCTTTTGAAAAAGGACCAGTTCGAAGCGGCCATCGGCTTCTTAAATAAGGCC
GCCGAGATACGGCCCGATCGCCAGGAGAAGGTGAAATCACTCTTGAACAAGGCGCAGGCCGCCCTACGACGAAGT
AAGACCAAGGACTACTACAAGGTCCTCGGCGTGCCGAGAGACGCCGATCAGCGACACATCAAGTCAGCCTACCGC
AAGGCCTCCAAGCTCCACCACCCGGATAAGGCGGCTAAGCAAGGCATCAGCAAGGAAGAGGCAGAGAAGAAGATG
GCGGCCATCAACGAGGCCTATGAAGTCCTGAGCGACCCGGAGCTACGCCAACGCTTCGACAATGGCGACGACCCC
AACTCGCAGGAGAAGGCCAATCCCTTCCAGGGTAGTCCCTTTGGCGGACCAAATCCTTTCATCTTTCGTCAGCAA
GGCGGACCTGGCGGTTCCCAAGCGAATTTCAAGTTTCACTTTGGTGGTGGCGGCCCATTTGGATTTTAG
Gene >Ophcf2|03260
ATGCGCTTCCAGCTCTCCAACCTGGCCGTGACAGCCGGCCTGCTGGCCTCTACCGGCATCGCGCTGTCCTCGCAC
GACATTCCTGCAGATCTTCCTGCATCAGCCCTCCTGACGTCTGCTCAGGCTCATCTGGCCAACGGCGAGACCAAC
GAAGCCCTCGTATATTTCGATGCTGCTGTCGGCAAGGACCCGAGCAACTACCTAACGCTCTTCAAGCGCGCCACC
ACCTACCTATCTCTTGGCCGCACTGCACATGCTACTCAGGATTTCGAAAGGGTTCTTGTACTCGAGCCGCGCTTC
GAAGGCGCTCATCTGCAGCTGGCCAAGATATTCTCCAAGGCCGCCAGGTGGAACAGTGCCAGGGTTGAATTTGAG
GCCGCCGGCAAGCGCTCCGACTCGCCCGAGCTCGTTGAGCTGGCCGAGGCGGAGGGGGCTGCTAGGCTCGTCGAC
GATGCCGTCAGGGCAGCCAAATGGGATGAGTGCGTTAACCAGGCTGGCGTCGCCATCCTCGTCGCCTCGAGATGC
GCAGCCCTGCGCCAGACACGCGCCCGCTGCCGCTTCGAGCGCGGCGAGATCGAAGAAGGAATGGGGGATTTGCAC
CACGTACTTCAGATGAGGCCGGGCGATACGTACCCTCACGTCCTTATTTCGGCCACCGCCTTTTACGCACTGGCA
GACTTGGATAATGGCCTAGCGCAGATTCGGAAATGCCTACACTCAGATCCAGATTCCGACATATGTAAAAAGATA
CATCGCCAACAAAAGGCCATTCAAAAGACTCTGCGCAATGCCGAAAGCCAGCTCAGAAAGGGGCAGTCGACGGCG
GCCGGCCGGACCCTAGGGGGCAACCCAAACGAGCCTGGTCTAGTCACCACTGTCAGAGATCAGATAAAAGTGTTG
CGCCAACACGGCAATATACCCTTCAAGGCTAAGGCTGCGCTATATGACAAGCTCGTCGACATGACGTGCCAAGCC
TATATTGAAGTTAGAATGCCGAGAGGGTCCCCAATGACGGTGAATATGCTAACGAAGTTGGCTAGTCAAACCACA
AAGACGCCATAAAGTACTGCGAACAAGCCCTGGAACTCGACCCGGATTCCTTTTGGGGCCTCCTCTACCGTGGCA
AGACGCTTTTGAAAAAGGACCAGTTCGAAGCGGCCATCGGCTTCTTAAATAAGGCCGCCGAGATACGGCCCGATC
GCCAGGAGAAGGTGAAATCACTCTTGAACAAGGCGCAGGCCGCCCTACGACGAAGTAAGACCAAGGACTACTACA
AGGTCCTCGGCGTGCCGAGAGACGCCGATCAGCGACACATCAAGTCAGCCTACCGCAAGGCCTCCAAGCTCCACC
ACCCGGATAAGGCGGCTAAGCAAGGCATCAGCAAGGAAGAGGCAGAGAAGAAGATGGCGGCCATCAACGAGGCCT
ATGAAGTCCTGAGCGACCCGGAGCTACGCCAACGCTTCGACAATGGCGACGACCCCAACTCGCAGGAGAAGGCCA
ATCCCTTCCAGGGTAGTCCCTTTGGCGGACCAAATCCTTTCATCTTTCGTCAGCAAGGCGGACCTGGCGGTTCCC
AAGCGAATTTCAAGTTTCACTTTGGTGGTGGCGGCCCATTTGGATTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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