Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03197
Gene name
Locationscaffold_03:906195..907014
Strand+
Gene length (bp)819
Transcript length (bp)819
Coding sequence length (bp)819
Protein length (aa) 273

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 63 85 22
3 98 120 22
4 147 169 22
5 196 218 22
6 233 255 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03197
MADCPPLIGNSDLYGLGVRIGLYAQWVATLLTTVFEPVNEGPLRLLNLIVQAAVFLGLCTESTRGGSAVGALVTQ
FLLCGSLSSVTGDGISHLGHATGLLRIGFYLALSSYGIWFWFGGLDEMLPPVPGCHDIAFFGPTSLRGWFRSVAK
AVSVIGLVVCVGLVVLAVLQARNRFRRGLRAAFARPAGERRPRVEVALVLLSAFLLILSAVTIEYLIRVNNIQGV
GPSRIGTVGQFIPLLAGVLACFLSLWKVIFDGLIFKKRCWFLFGWHL*
Coding >Ophcf2|03197
ATGGCAGACTGTCCTCCTCTCATCGGCAACTCCGACCTCTACGGCCTCGGCGTCCGCATAGGCCTCTACGCTCAA
TGGGTCGCAACCCTCCTTACAACCGTGTTCGAGCCCGTCAACGAAGGCCCCCTCCGCCTCTTAAACCTCATCGTC
CAGGCCGCCGTCTTCCTCGGCCTATGCACAGAGTCCACTCGCGGGGGCAGCGCCGTCGGCGCCCTCGTAACCCAG
TTTCTCCTCTGCGGCTCTCTTTCCAGCGTTACCGGCGACGGCATCAGTCATCTTGGTCACGCAACTGGCTTGCTT
CGCATCGGCTTCTACCTCGCTTTGTCGTCGTACGGTATCTGGTTCTGGTTCGGGGGTCTGGATGAGATGCTGCCT
CCCGTTCCGGGTTGTCATGACATCGCCTTCTTCGGCCCTACGTCTCTACGTGGCTGGTTTCGCTCTGTGGCCAAG
GCTGTTTCTGTTATTGGACTGGTCGTCTGTGTTGGTCTTGTTGTACTTGCCGTCTTACAGGCCCGCAATCGTTTC
CGCCGCGGACTGAGAGCCGCTTTTGCTCGCCCTGCTGGTGAAAGACGACCTCGTGTCGAGGTGGCTCTAGTGCTG
CTGTCCGCCTTTTTGCTGATTCTTTCCGCCGTAACCATCGAGTACCTCATTCGTGTCAACAACATCCAGGGCGTG
GGTCCTTCGAGGATAGGCACCGTCGGCCAATTCATCCCTCTTCTCGCCGGCGTTCTCGCCTGCTTCCTCTCTCTT
TGGAAAGTCATCTTCGACGGGCTCATTTTCAAGAAGAGATGTTGGTTCTTGTTTGGCTGGCATCTCTGA
Transcript >Ophcf2|03197
ATGGCAGACTGTCCTCCTCTCATCGGCAACTCCGACCTCTACGGCCTCGGCGTCCGCATAGGCCTCTACGCTCAA
TGGGTCGCAACCCTCCTTACAACCGTGTTCGAGCCCGTCAACGAAGGCCCCCTCCGCCTCTTAAACCTCATCGTC
CAGGCCGCCGTCTTCCTCGGCCTATGCACAGAGTCCACTCGCGGGGGCAGCGCCGTCGGCGCCCTCGTAACCCAG
TTTCTCCTCTGCGGCTCTCTTTCCAGCGTTACCGGCGACGGCATCAGTCATCTTGGTCACGCAACTGGCTTGCTT
CGCATCGGCTTCTACCTCGCTTTGTCGTCGTACGGTATCTGGTTCTGGTTCGGGGGTCTGGATGAGATGCTGCCT
CCCGTTCCGGGTTGTCATGACATCGCCTTCTTCGGCCCTACGTCTCTACGTGGCTGGTTTCGCTCTGTGGCCAAG
GCTGTTTCTGTTATTGGACTGGTCGTCTGTGTTGGTCTTGTTGTACTTGCCGTCTTACAGGCCCGCAATCGTTTC
CGCCGCGGACTGAGAGCCGCTTTTGCTCGCCCTGCTGGTGAAAGACGACCTCGTGTCGAGGTGGCTCTAGTGCTG
CTGTCCGCCTTTTTGCTGATTCTTTCCGCCGTAACCATCGAGTACCTCATTCGTGTCAACAACATCCAGGGCGTG
GGTCCTTCGAGGATAGGCACCGTCGGCCAATTCATCCCTCTTCTCGCCGGCGTTCTCGCCTGCTTCCTCTCTCTT
TGGAAAGTCATCTTCGACGGGCTCATTTTCAAGAAGAGATGTTGGTTCTTGTTTGGCTGGCATCTCTGA
Gene >Ophcf2|03197
ATGGCAGACTGTCCTCCTCTCATCGGCAACTCCGACCTCTACGGCCTCGGCGTCCGCATAGGCCTCTACGCTCAA
TGGGTCGCAACCCTCCTTACAACCGTGTTCGAGCCCGTCAACGAAGGCCCCCTCCGCCTCTTAAACCTCATCGTC
CAGGCCGCCGTCTTCCTCGGCCTATGCACAGAGTCCACTCGCGGGGGCAGCGCCGTCGGCGCCCTCGTAACCCAG
TTTCTCCTCTGCGGCTCTCTTTCCAGCGTTACCGGCGACGGCATCAGTCATCTTGGTCACGCAACTGGCTTGCTT
CGCATCGGCTTCTACCTCGCTTTGTCGTCGTACGGTATCTGGTTCTGGTTCGGGGGTCTGGATGAGATGCTGCCT
CCCGTTCCGGGTTGTCATGACATCGCCTTCTTCGGCCCTACGTCTCTACGTGGCTGGTTTCGCTCTGTGGCCAAG
GCTGTTTCTGTTATTGGACTGGTCGTCTGTGTTGGTCTTGTTGTACTTGCCGTCTTACAGGCCCGCAATCGTTTC
CGCCGCGGACTGAGAGCCGCTTTTGCTCGCCCTGCTGGTGAAAGACGACCTCGTGTCGAGGTGGCTCTAGTGCTG
CTGTCCGCCTTTTTGCTGATTCTTTCCGCCGTAACCATCGAGTACCTCATTCGTGTCAACAACATCCAGGGCGTG
GGTCCTTCGAGGATAGGCACCGTCGGCCAATTCATCCCTCTTCTCGCCGGCGTTCTCGCCTGCTTCCTCTCTCTT
TGGAAAGTCATCTTCGACGGGCTCATTTTCAAGAAGAGATGTTGGTTCTTGTTTGGCTGGCATCTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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