© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03162 |
| Gene name | |
| Location | scaffold_03:811813..814443 |
| Strand | - |
| Gene length (bp) | 2630 |
| Transcript length (bp) | 2061 |
| Coding sequence length (bp) | 2061 |
| Protein length (aa) | 687 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 6.4E-68 | 132 | 563 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 77 | 99 | 22 |
| 2 | 157 | 179 | 22 |
| 3 | 216 | 238 | 22 |
| 4 | 248 | 270 | 22 |
| 5 | 358 | 380 | 22 |
| 6 | 400 | 417 | 17 |
| 7 | 430 | 452 | 22 |
| 8 | 462 | 484 | 22 |
| 9 | 497 | 516 | 19 |
| 10 | 526 | 548 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 3.13 | 0.86 | 5.39 |
| Alive | In ants, during behavior modification | 1.25 | 0.19 | 2.32 |
| Dead | In ants, recently dead | 0.87 | 0.09 | 1.65 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.007753 | yes |
| Alive | Dead | 0.302384 | no |
| Dead | Fungus | 0.001043 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03162 MTDADLVTDVKIFAHDHLPNVPYDRVLRAARVAKDIRLYDEIARRTRIDGSHLPVRLTDKEKDALCREKDVTFSE KGMRIVIATVSLAALLQGFVQSSFNGASLYAGAWDLDLHHKGQGVTLDVWRLGAANASPWMVAALLGCPLSLPIN YWFGRRGAIAVAAFLILASSIGAIFVSNWKQMFCVRIVNGLGMGIKAVSTPILASETAIGFWRGSAILAWQLWVA FGIMAGFAFNMIFSIAKDDRVILRLIQGAPLVPSLALLVLALGFCPESPRYHLMKGPNYSVQKAHEALKKVRNTE LQALRDLYMVYKALEQERVGLLSWDPHVSLSPGFFWVMRDFLSQYGQLFRRRRLYNALLSACTVNLAQQLCGVNV FVFYSGSLFTRDAGSEPDPVSKLKAMAYSLGFGAINFLFALPAVKSIDTLGRRKWLLATLPFMSLFMLGAGLSYF LGDEESEVRKGVTAGFLYLFAIAYSPGLGPIPFTLASEGFPLTHREAGTSCAISTNLFFAGLLSICYPRIDVALG QAGSLGLFSGLNIVALVLVFLLVEETKQLTLEELDHVFAVSKRDFMRFQLAEYLPWLLRQYLCGGQDKPPVLYKN MVSGPGPTPNNARTAYNMPSYVESQSMRAQRSRTGETDRMEAGSRGNIVEMDKPVRYNQYYSRVPVPHGTGGNGS YRPDSPGWNYR* |
| Coding | >Ophcf2|03162 ATGACGGACGCAGACCTGGTGACGGACGTCAAAATCTTTGCACACGATCATCTCCCCAACGTCCCTTATGATCGT GTTCTTCGTGCTGCTCGAGTTGCCAAGGACATTCGTCTATACGATGAGATTGCGCGGAGGACGCGTATCGACGGC AGTCACCTGCCCGTGCGTCTGACGGATAAAGAGAAGGACGCCCTGTGCAGAGAAAAGGACGTGACGTTTAGCGAA AAGGGGATGCGCATTGTCATTGCGACTGTGTCGTTGGCGGCTCTCTTACAAGGGTTTGTTCAGTCATCGTTCAAT GGGGCTTCATTGTATGCCGGTGCCTGGGACCTGGACCTTCATCACAAAGGCCAGGGCGTTACTCTCGACGTCTGG CGTCTCGGAGCGGCCAATGCATCGCCCTGGATGGTCGCCGCCCTGTTGGGATGTCCGCTCTCGCTGCCCATCAAC TACTGGTTCGGCAGACGAGGAGCCATCGCCGTGGCAGCCTTTCTGATCCTCGCGAGCTCCATCGGCGCCATCTTC GTCTCCAACTGGAAGCAGATGTTTTGCGTCCGGATCGTCAATGGCTTGGGCATGGGCATCAAGGCCGTGAGCACT CCTATCCTGGCTTCCGAGACGGCAATCGGCTTCTGGCGCGGCTCGGCTATACTCGCCTGGCAACTTTGGGTTGCC TTTGGTATTATGGCAGGCTTCGCCTTCAACATGATCTTCAGCATAGCCAAAGACGACAGGGTGATTCTCCGTCTG ATACAGGGCGCTCCTCTCGTCCCCAGTCTCGCCCTTCTCGTCCTGGCCTTGGGCTTCTGCCCCGAGTCGCCGCGC TATCACCTCATGAAGGGGCCCAACTATAGCGTTCAAAAGGCACACGAGGCTCTCAAGAAGGTCAGGAACACCGAG CTCCAAGCCTTACGCGACCTGTACATGGTCTACAAGGCGCTCGAGCAAGAACGAGTCGGGCTTCTCAGCTGGGAT CCGCACGTGTCCTTGTCGCCAGGCTTCTTTTGGGTCATGCGCGATTTCCTCTCCCAGTACGGGCAACTCTTTCGA CGGCGGCGGCTGTACAACGCCCTTTTATCCGCTTGCACAGTCAACCTAGCGCAGCAGCTTTGCGGAGTTAACGTT TTCGTCTTCTACTCTGGTTCTCTTTTTACTCGAGATGCTGGCTCCGAACCGGACCCCGTGTCTAAACTCAAAGCT ATGGCCTATAGTCTAGGTTTCGGGGCCATCAACTTCCTCTTTGCTTTGCCGGCAGTGAAGAGCATTGACACACTC GGTCGACGGAAATGGCTTCTGGCCACGCTGCCTTTCATGTCTCTGTTCATGCTTGGCGCCGGTCTCTCCTATTTT CTTGGAGACGAAGAGAGTGAGGTCCGGAAAGGGGTGACGGCTGGTTTCTTATATCTGTTTGCTATCGCCTACTCA CCTGGCTTGGGCCCGATTCCGTTCACGCTGGCATCGGAAGGCTTTCCGCTGACCCATCGAGAGGCAGGAACATCT TGTGCCATTTCGACCAACTTGTTCTTCGCTGGACTGTTATCCATCTGCTACCCAAGAATCGACGTGGCACTCGGT CAGGCCGGATCACTCGGCCTGTTCAGCGGGCTGAATATTGTGGCCCTTGTACTCGTGTTCCTCTTAGTAGAAGAG ACGAAGCAGCTGACGCTTGAAGAGCTCGACCACGTCTTTGCCGTGTCGAAGCGTGACTTCATGCGCTTCCAGCTA GCCGAGTATCTGCCTTGGCTACTAAGGCAGTATCTCTGCGGGGGCCAAGACAAGCCGCCTGTGCTTTACAAGAAC ATGGTATCAGGACCTGGCCCAACGCCAAATAACGCGAGAACGGCGTACAACATGCCGTCGTATGTCGAGAGCCAG TCGATGCGTGCTCAACGGTCCCGCACAGGGGAGACGGACAGAATGGAGGCGGGAAGCCGCGGGAATATCGTGGAG ATGGACAAACCTGTGCGATACAATCAGTACTATTCGCGGGTTCCGGTTCCGCATGGCACGGGTGGCAATGGGAGT TATCGGCCGGATTCTCCGGGTTGGAATTATCGTTGA |
| Transcript | >Ophcf2|03162 ATGACGGACGCAGACCTGGTGACGGACGTCAAAATCTTTGCACACGATCATCTCCCCAACGTCCCTTATGATCGT GTTCTTCGTGCTGCTCGAGTTGCCAAGGACATTCGTCTATACGATGAGATTGCGCGGAGGACGCGTATCGACGGC AGTCACCTGCCCGTGCGTCTGACGGATAAAGAGAAGGACGCCCTGTGCAGAGAAAAGGACGTGACGTTTAGCGAA AAGGGGATGCGCATTGTCATTGCGACTGTGTCGTTGGCGGCTCTCTTACAAGGGTTTGTTCAGTCATCGTTCAAT GGGGCTTCATTGTATGCCGGTGCCTGGGACCTGGACCTTCATCACAAAGGCCAGGGCGTTACTCTCGACGTCTGG CGTCTCGGAGCGGCCAATGCATCGCCCTGGATGGTCGCCGCCCTGTTGGGATGTCCGCTCTCGCTGCCCATCAAC TACTGGTTCGGCAGACGAGGAGCCATCGCCGTGGCAGCCTTTCTGATCCTCGCGAGCTCCATCGGCGCCATCTTC GTCTCCAACTGGAAGCAGATGTTTTGCGTCCGGATCGTCAATGGCTTGGGCATGGGCATCAAGGCCGTGAGCACT CCTATCCTGGCTTCCGAGACGGCAATCGGCTTCTGGCGCGGCTCGGCTATACTCGCCTGGCAACTTTGGGTTGCC TTTGGTATTATGGCAGGCTTCGCCTTCAACATGATCTTCAGCATAGCCAAAGACGACAGGGTGATTCTCCGTCTG ATACAGGGCGCTCCTCTCGTCCCCAGTCTCGCCCTTCTCGTCCTGGCCTTGGGCTTCTGCCCCGAGTCGCCGCGC TATCACCTCATGAAGGGGCCCAACTATAGCGTTCAAAAGGCACACGAGGCTCTCAAGAAGGTCAGGAACACCGAG CTCCAAGCCTTACGCGACCTGTACATGGTCTACAAGGCGCTCGAGCAAGAACGAGTCGGGCTTCTCAGCTGGGAT CCGCACGTGTCCTTGTCGCCAGGCTTCTTTTGGGTCATGCGCGATTTCCTCTCCCAGTACGGGCAACTCTTTCGA CGGCGGCGGCTGTACAACGCCCTTTTATCCGCTTGCACAGTCAACCTAGCGCAGCAGCTTTGCGGAGTTAACGTT TTCGTCTTCTACTCTGGTTCTCTTTTTACTCGAGATGCTGGCTCCGAACCGGACCCCGTGTCTAAACTCAAAGCT ATGGCCTATAGTCTAGGTTTCGGGGCCATCAACTTCCTCTTTGCTTTGCCGGCAGTGAAGAGCATTGACACACTC GGTCGACGGAAATGGCTTCTGGCCACGCTGCCTTTCATGTCTCTGTTCATGCTTGGCGCCGGTCTCTCCTATTTT CTTGGAGACGAAGAGAGTGAGGTCCGGAAAGGGGTGACGGCTGGTTTCTTATATCTGTTTGCTATCGCCTACTCA CCTGGCTTGGGCCCGATTCCGTTCACGCTGGCATCGGAAGGCTTTCCGCTGACCCATCGAGAGGCAGGAACATCT TGTGCCATTTCGACCAACTTGTTCTTCGCTGGACTGTTATCCATCTGCTACCCAAGAATCGACGTGGCACTCGGT CAGGCCGGATCACTCGGCCTGTTCAGCGGGCTGAATATTGTGGCCCTTGTACTCGTGTTCCTCTTAGTAGAAGAG ACGAAGCAGCTGACGCTTGAAGAGCTCGACCACGTCTTTGCCGTGTCGAAGCGTGACTTCATGCGCTTCCAGCTA GCCGAGTATCTGCCTTGGCTACTAAGGCAGTATCTCTGCGGGGGCCAAGACAAGCCGCCTGTGCTTTACAAGAAC ATGGTATCAGGACCTGGCCCAACGCCAAATAACGCGAGAACGGCGTACAACATGCCGTCGTATGTCGAGAGCCAG TCGATGCGTGCTCAACGGTCCCGCACAGGGGAGACGGACAGAATGGAGGCGGGAAGCCGCGGGAATATCGTGGAG ATGGACAAACCTGTGCGATACAATCAGTACTATTCGCGGGTTCCGGTTCCGCATGGCACGGGTGGCAATGGGAGT TATCGGCCGGATTCTCCGGGTTGGAATTATCGTTGA |
| Gene | >Ophcf2|03162 ATGACGGACGCAGACCTGGTGACGGACGTCAAAATCTTTGCACACGATCATCTCCCCAACGTCCCTTATGATCGT GTTCTTCGTGCTGCTCGAGTTGCCAAGGACATTCGTCTATACGATGAGATTGCGCGGAGGACGCGTATCGACGGC AGTCACCTGCCCGTGCGTCTGACGGATAAAGAGAAGGACGCCCTGTGCAGAGAAAAGGACGTGACGTTTAGCGAA AAGGGGATGCGCATTGTCATTGCGACTGTGTCGTTGGCGGCTCTCTTACAAGGTCTAGTACTCATCAAACGCCGT TAGTCGATGACCGCTGACCGTCTTCAAGGGTTTGTTCAGTCATCGTTCAATGGGGCTTCATTGTATGCCGGTGCC TGGGACCTGGACCTTCATCACAAAGGCCAGGGCGTTACTCTCGACGTCTGGCGTCTCGGAGCGGCCAATGCATCG CCCTGGATGGTCGCCGCCCTGTTGGGATGTCCGCTCTCGCTGCCCATCAACTACTGGTTCGGCAGACGAGGAGCC ATCGCCGTGGCAGCCTTTCTGATCCTCGCGAGCTCCATCGGCGCCATCTTCGTCTCCAACTGGAAGCAGATGTTT TGCGTCCGGATCGTCAATGGCTTGGGTTTGTCTTTTGCTCCCTCGTACCGGATCTGATGATAACCAGATGTCTCG CAGGCATGGGCATCAAGGCCGTGAGCACTCCTATCCTGGCTTCCGAGACGGCAATCGGCTTCTGGCGCGGCTCGG CTATACTCGCCTGGCAACTTTGGTATGAATAACACTGATGAAGATGGGCCCAAGGTGGAAGCGCAAGCTAATGAT GAGCCCTCGTAAAAAGGGTTGCCTTTGGTATTATGGCAGGCTTCGCCTTCAACATGATCTTCAGCATAGCCAAAG ACGACAGGGTGATTCTCCGTCTGATACAGGGCGCTCCTCTCGTCCCCAGTCTCGCCCTTCTCGTCCTGGCCTTGG GCTTCTGCCCCGAGTCGCCGCGCTATCACCTCATGAAGGGGCCCAACTATAGCGTTCAAAAGGCACACGAGGCTC TCAAGAAGGTCAGGAACACCGAGGTACGAGATATGAGCCTCTATATGGCTCCATACACGTCTCACGGTCTCTCAC GCAGCTCCAAGCCTTACGCGACCTGTACATGGTCTACAAGGCGCTCGAGCAAGAACGAGTCGGGCTTCTCAGCTG GGATCCGCACGTGTCCTTGTCGCCAGGCTTCTTTTGGGTCATGCGCGATTTCCTCTCCCAGTACGGGCAACTCTT TCGACGGCGGCGGCTGTACAACGCCCTTTTATCCGCTTGCACAGTCAACCTAGCGCAGCAGCTTTGCGGAGGTGA GACTAAGGTCTGATGTATGATCCTTTCCACGAGGCTGACGCTATACTTGGTTGTAGTTAACGTTTTCGTCTTCTA CTCTGGTCCGTTGTCTTCTCAGATTGTCCATCATATTTCTCACGCTCATAATGGTCCTATAGGTTCTCTTTTTAC TCGAGATGCTGGCTCCGAACCGGACCCCGTGTCTAAACTCAAAGCTATGGCCTATAGTCTAGGTTTCGGTGAGCG AGATACCAGCGGTCACTAGTTGCTATGCGCTGACATGGAGGCTTCTGTCAGGGGCCATCAACTTCCTCTTTGCTT TGCCGGCAGTGAAGAGCATTGACACACTCGGTCGACGGAAATGGCTTCTGGCCACGCTGCCTTTCATGTCTCTGT TCATGCTTGGCGCCGGTCTCTCCTATTTTCTTGGAGACGAAGAGAGTGAGGTCCGGAAAGGGGTGACGGCTGGTT TCTTATATCGTGCGTATCTCTCTTCATCAGCACCTGGTGCCCTGCCTTACGAATGCTGACTAGCCCCGAGTGTTT GCTATCGCCTACTCACCTGGCTTGGGCCCGATTCCGTTCACGCTGGCATCGGAAGGCTTTCCGCTGACCCATCGA GAGGCAGTAAGTCTCCAAGGGCACTCGCATCTTTAAGCTGACCAGGCAAGGGAACATCTTGTGCCATTTCGACCA ACTTGTTCTTCGCTGGACTGTTATCCATCTGCTACCCAAGGTATGCGCCCCAAAATCGGCTGCTACGGGCGAGTT GCTAACAATGAGTTCACGCACGCAGAATCGACGTGGCACTCGGTCAGGCCGGATCACTCGGCCTGTTCAGCGGGC TGAATATTGTGGCCCTTGTACTCGTGTTCCTCTTAGTAGAAGAGACGAAGCAGCTGACGCTTGAAGAGCTCGACC ACGTCTTTGCCGTGTCGAAGCGTGACTTCATGCGCTTCCAGCTAGCCGAGTATCTGCCTTGGCTACTAAGGCAGT ATCTCTGCGGGGGCCAAGACAAGCCGCCTGTGCTTTACAAGAACATGGTATCAGGACCTGGCCCAACGCCAAATA ACGCGAGAACGGCGTACAACATGCCGTCGTATGTCGAGAGCCAGTCGATGCGTGCTCAACGGTCCCGCACAGGGG AGACGGACAGAATGGAGGCGGGAAGCCGCGGGAATATCGTGGAGATGGACAAACCTGTGCGATACAATCAGTACT ATTCGCGGGTTCCGGTTCCGCATGGCACGGGTGGCAATGGGAGTTATCGGCCGGATTCTCCGGGTTGGAATTATC GTTGA |