Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03156
Gene name
Locationscaffold_03:792789..793863
Strand+
Gene length (bp)1074
Transcript length (bp)804
Coding sequence length (bp)804
Protein length (aa) 268

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12351 Fig1 Ca2+ regulator and membrane fusion protein Fig1 1.5E-53 75 256

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 140 162 22
3 182 204 22
4 235 257 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03156
MPKFEVGWYRFVPFLGYHHVLMILIAVAIILLSLLLAGCSSSSPLIPDIFLLSLYYQHYEAVPDTAQVDYNVHTA
IENIAGSASLQARVGYFGICVNPDGGSWLCSNNATALAKEVSVDQDPLNLIWLAAQFKDMIVFPYLIIIAIIFAF
ICFILLATFPGWHEEEDSQGSDRIVRHFPSRFVSQIALAIVFIASIFVLVSVLWQHTASVAASIIAQDFANGSVR
SGVGTSAMVMGWFAFTLLIIVTIGLVIMILSIRVINEYFPDN*
Coding >Ophcf2|03156
ATGCCCAAGTTTGAAGTTGGCTGGTATCGGTTCGTACCGTTCCTCGGCTACCATCATGTCCTGATGATCCTCATC
GCCGTCGCCATCATCCTCCTCTCCCTCCTCCTAGCCGGCTGCTCGTCCTCCTCCCCCCTCATCCCAGACATCTTC
CTCCTCTCTCTCTACTACCAACACTACGAGGCCGTCCCCGACACCGCCCAGGTAGACTACAACGTCCACACGGCC
ATCGAGAACATCGCCGGCAGCGCCAGCCTACAAGCCCGCGTCGGCTACTTCGGCATCTGCGTCAACCCGGATGGC
GGCTCCTGGCTCTGCAGCAATAACGCCACGGCCCTCGCAAAGGAGGTATCCGTCGATCAGGATCCGCTGAATCTC
ATTTGGCTGGCCGCTCAGTTCAAAGACATGATTGTCTTTCCCTACCTCATCATCATCGCCATCATCTTCGCCTTC
ATCTGCTTCATCCTCCTCGCAACCTTCCCCGGCTGGCACGAAGAAGAAGACTCCCAAGGCTCAGACCGTATCGTC
AGGCACTTCCCCTCACGCTTCGTCTCCCAGATCGCCCTGGCCATCGTCTTCATCGCCTCCATCTTCGTCCTCGTC
TCCGTCCTCTGGCAGCACACCGCCTCCGTCGCTGCCTCCATCATCGCCCAGGACTTTGCCAACGGCTCCGTCCGC
AGCGGCGTCGGCACCAGCGCCATGGTCATGGGTTGGTTTGCCTTTACCCTGCTCATCATCGTTACAATCGGCCTC
GTCATCATGATCCTCAGCATCAGGGTTATAAACGAGTACTTTCCCGATAACTAG
Transcript >Ophcf2|03156
ATGCCCAAGTTTGAAGTTGGCTGGTATCGGTTCGTACCGTTCCTCGGCTACCATCATGTCCTGATGATCCTCATC
GCCGTCGCCATCATCCTCCTCTCCCTCCTCCTAGCCGGCTGCTCGTCCTCCTCCCCCCTCATCCCAGACATCTTC
CTCCTCTCTCTCTACTACCAACACTACGAGGCCGTCCCCGACACCGCCCAGGTAGACTACAACGTCCACACGGCC
ATCGAGAACATCGCCGGCAGCGCCAGCCTACAAGCCCGCGTCGGCTACTTCGGCATCTGCGTCAACCCGGATGGC
GGCTCCTGGCTCTGCAGCAATAACGCCACGGCCCTCGCAAAGGAGGTATCCGTCGATCAGGATCCGCTGAATCTC
ATTTGGCTGGCCGCTCAGTTCAAAGACATGATTGTCTTTCCCTACCTCATCATCATCGCCATCATCTTCGCCTTC
ATCTGCTTCATCCTCCTCGCAACCTTCCCCGGCTGGCACGAAGAAGAAGACTCCCAAGGCTCAGACCGTATCGTC
AGGCACTTCCCCTCACGCTTCGTCTCCCAGATCGCCCTGGCCATCGTCTTCATCGCCTCCATCTTCGTCCTCGTC
TCCGTCCTCTGGCAGCACACCGCCTCCGTCGCTGCCTCCATCATCGCCCAGGACTTTGCCAACGGCTCCGTCCGC
AGCGGCGTCGGCACCAGCGCCATGGTCATGGGTTGGTTTGCCTTTACCCTGCTCATCATCGTTACAATCGGCCTC
GTCATCATGATCCTCAGCATCAGGGTTATAAACGAGTACTTTCCCGATAACTAG
Gene >Ophcf2|03156
ATGCCCAAGTTTGAAGTTGGCTGGTATCGTACGTTTTGATTCTTTTCTTGTTGATGGTTTGGGGAGAGAGGGGGA
GAAGAGGAAGAGAGAGAGAGAGAGAGAGAGGGAAAGAAGGAAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAC
ACTGCAATGTGCAACGACGAGGCTAACTGGGCTATTGCAGGGTTCGTACCGTTCCTCGGCTACCATCATGTCCTG
ATGATCCTCATCGCCGTCGCCATCATCCTCCTCTGTATGAACCCCCCCCCCAACAACAACACAACCACCAGCACT
AACAAAACCTCCAGCCCTCCTCCTAGCCGGCTGCTCGTCCTCCTCCCCCCTCATCCCAGACATCTTCCTCCTCTC
TCTCTACTACCAACACTACGAGGCCGTCCCCGACACCGCCCAGGTAGACTACAACGTCCACACGGCCATCGAGAA
CATCGCCGGCAGCGCCAGCCTACAAGCCCGCGTCGGCTACTTCGGCATCTGCGTCAACCCGGATGGCGGCTCCTG
GCTCTGCAGCAATAACGCCACGGCCCTCGCAAAGGAGGTATCCGTCGATCAGGATCCGCTGAATCTCATTTGGCT
GGCCGCTCAGTTCAAAGACATGATTGTCTTTCCCTACCTCATGTCGGTCTTCTCTTCCTCCCCATCTCATCTTTG
ATGCACTAACACAGGCCCAGCATCATCGCCATCATCTTCGCCTTCATCTGCTTCATCCTCCTCGCAACCTTCCCC
GGCTGGCACGAAGAAGAAGACTCCCAAGGCTCAGACCGTATCGTCAGGCACTTCCCCTCACGCTTCGTCTCCCAG
ATCGCCCTGGCCATCGTCTTCATCGCCTCCATCTTCGTCCTCGTCTCCGTCCTCTGGCAGCACACCGCCTCCGTC
GCTGCCTCCATCATCGCCCAGGACTTTGCCAACGGCTCCGTCCGCAGCGGCGTCGGCACCAGCGCCATGGTCATG
GGTTGGTTTGCCTTTACCCTGCTCATCATCGTTACAATCGGCCTCGTCATCATGATCCTCAGCATCAGGGTTATA
AACGAGTACTTTCCCGATAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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