Protein ID | Ophcf2|03144 |
Gene name | |
Location | scaffold_03:761193..762882 |
Strand | - |
Gene length (bp) | 1689 |
Transcript length (bp) | 1689 |
Coding sequence length (bp) | 1689 |
Protein length (aa) | 563 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01794 | Ferric_reduct | Ferric reductase like transmembrane component | 1.5E-17 | 129 | 243 |
PF08030 | NAD_binding_6 | Ferric reductase NAD binding domain | 9.6E-11 | 399 | 542 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016491 | oxidoreductase activity | Yes |
GO:0003824 | catalytic activity | No |
GO:0003674 | molecular_function | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.0563 | 0.2258 | 0.0627 | 0.1605 | 0.1923 | 0.005 | 0.6597 | 0.3134 | 0.3982 | 0.0347 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 28 | 50 | 22 |
2 | 167 | 189 | 22 |
3 | 202 | 224 | 22 |
4 | 231 | 253 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 2473 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03144 MAWTWTIQPPTLTEEAKHHRHTTINLYALTAHASSLTPLLFALVIKLVLVTLTQKTYVPIPTSPSAKAQRLTRAR RVRDALVRLRWWLDDDVGFGRRDEWLAGIVWLSWLLFLSIHGTGTDFLHFTKRLGAVAVSQLPAQYALSLKALNP YALAFTSSHERLNRFHGVLGRVIAVLLALHVACYNYFFVVVGIWPSRLLDRVVVYGLVAVVAVLALYLTTLTSVR RASYRLFFITHVIVALLVPPLIFFHAPSTRIYLIESLLAILADLSVRKLRSITSPSTLNLVPDAALVAIEAHVPP RFLRSVSASPGSHVYLSIPPGSSRDSSVSRAFDFLHNPFSVAFVDDRRGSITLVARLRQGPMTRTLARLASSAGK VPLTIDGPYGSVARRLVGWSPSRIVVIAGGVGATFCLPLYRFLREQLPTTTRVRLVWSVRTLADAAWASDAGLLP PDDEHDDEHDHDHDGFQLYVSGRPLAPALQDTADTDPAVELRPLRKALPPRHHRGRPHLDEVVDSVFRQGVEDSV AVLVCGPVEMAAHVRGCVRPWAMRGRDVWWHSESFGS* |
Coding | >Ophcf2|03144 ATGGCCTGGACATGGACAATCCAACCCCCGACCCTCACCGAAGAAGCCAAGCACCATCGCCACACCACAATCAAC CTCTACGCCCTCACCGCCCACGCCTCCTCCCTCACCCCCCTCCTCTTCGCCCTCGTCATCAAACTCGTCCTCGTC ACCCTCACGCAGAAAACCTACGTCCCCATCCCCACCTCCCCTTCCGCCAAAGCGCAGCGACTCACACGCGCGAGA AGGGTTCGCGATGCCCTGGTGCGGCTCCGGTGGTGGCTAGACGATGACGTTGGGTTCGGGCGTCGGGATGAGTGG TTGGCTGGCATCGTTTGGCTATCATGGCTTCTCTTCCTCAGCATTCACGGGACGGGAACGGATTTCCTGCACTTC ACAAAGAGATTGGGTGCCGTGGCTGTCTCCCAACTTCCGGCACAGTACGCTCTCTCGCTCAAGGCGTTGAATCCC TACGCGCTGGCCTTTACGTCGTCGCATGAGCGGCTGAATCGCTTCCACGGCGTGTTGGGCAGGGTCATCGCCGTG CTGCTTGCTTTGCACGTCGCCTGCTATAATTACTTCTTCGTCGTGGTGGGTATATGGCCTTCTAGATTACTGGAT CGGGTCGTCGTTTACGGGCTTGTTGCCGTGGTTGCGGTGCTTGCTCTGTACCTTACCACTCTAACCTCGGTTCGA CGCGCTTCCTATCGCCTCTTTTTCATCACGCACGTCATCGTCGCTCTTCTCGTCCCCCCACTAATCTTCTTCCAC GCCCCTTCAACAAGAATCTACCTCATCGAATCTCTCCTCGCCATCCTAGCCGATCTATCCGTCCGCAAGCTCCGA TCCATCACCTCCCCCTCGACGCTCAACCTCGTCCCCGACGCCGCCCTCGTCGCCATCGAGGCACATGTCCCGCCG CGATTCCTACGCTCCGTATCCGCCTCGCCAGGCTCTCACGTCTATCTCAGCATCCCGCCCGGTAGCAGTCGCGAC TCGTCCGTATCACGAGCCTTTGATTTTCTCCATAACCCGTTTAGCGTTGCTTTCGTGGACGATAGACGCGGTTCC ATCACTCTCGTTGCTCGGCTTCGTCAGGGGCCCATGACTCGGACCTTGGCCCGGTTGGCCTCGTCTGCGGGAAAG GTGCCTCTCACCATAGACGGTCCCTACGGCTCTGTAGCCCGTCGTCTCGTCGGCTGGTCTCCTTCCCGTATCGTC GTCATCGCAGGCGGCGTCGGCGCAACCTTCTGTCTACCTCTTTACCGCTTCCTACGCGAGCAGCTCCCTACCACC ACCCGCGTCCGCCTCGTCTGGTCCGTCCGCACCCTCGCCGACGCAGCATGGGCCTCTGACGCCGGACTCCTCCCT CCCGACGACGAACATGACGATGAACATGACCATGACCATGACGGCTTCCAGCTCTATGTGTCGGGACGCCCTCTC GCTCCTGCTCTTCAAGACACAGCCGATACCGATCCGGCCGTCGAGCTGCGACCTCTCCGCAAGGCCTTACCGCCC AGACACCACCGTGGTCGTCCCCATCTGGACGAGGTTGTCGACTCCGTCTTCCGCCAGGGCGTCGAGGACTCCGTT GCCGTTCTCGTCTGCGGGCCGGTCGAAATGGCTGCCCACGTCAGAGGCTGCGTGCGTCCGTGGGCCATGCGCGGT AGAGACGTGTGGTGGCACAGCGAGAGCTTCGGCTCATGA |
Transcript | >Ophcf2|03144 ATGGCCTGGACATGGACAATCCAACCCCCGACCCTCACCGAAGAAGCCAAGCACCATCGCCACACCACAATCAAC CTCTACGCCCTCACCGCCCACGCCTCCTCCCTCACCCCCCTCCTCTTCGCCCTCGTCATCAAACTCGTCCTCGTC ACCCTCACGCAGAAAACCTACGTCCCCATCCCCACCTCCCCTTCCGCCAAAGCGCAGCGACTCACACGCGCGAGA AGGGTTCGCGATGCCCTGGTGCGGCTCCGGTGGTGGCTAGACGATGACGTTGGGTTCGGGCGTCGGGATGAGTGG TTGGCTGGCATCGTTTGGCTATCATGGCTTCTCTTCCTCAGCATTCACGGGACGGGAACGGATTTCCTGCACTTC ACAAAGAGATTGGGTGCCGTGGCTGTCTCCCAACTTCCGGCACAGTACGCTCTCTCGCTCAAGGCGTTGAATCCC TACGCGCTGGCCTTTACGTCGTCGCATGAGCGGCTGAATCGCTTCCACGGCGTGTTGGGCAGGGTCATCGCCGTG CTGCTTGCTTTGCACGTCGCCTGCTATAATTACTTCTTCGTCGTGGTGGGTATATGGCCTTCTAGATTACTGGAT CGGGTCGTCGTTTACGGGCTTGTTGCCGTGGTTGCGGTGCTTGCTCTGTACCTTACCACTCTAACCTCGGTTCGA CGCGCTTCCTATCGCCTCTTTTTCATCACGCACGTCATCGTCGCTCTTCTCGTCCCCCCACTAATCTTCTTCCAC GCCCCTTCAACAAGAATCTACCTCATCGAATCTCTCCTCGCCATCCTAGCCGATCTATCCGTCCGCAAGCTCCGA TCCATCACCTCCCCCTCGACGCTCAACCTCGTCCCCGACGCCGCCCTCGTCGCCATCGAGGCACATGTCCCGCCG CGATTCCTACGCTCCGTATCCGCCTCGCCAGGCTCTCACGTCTATCTCAGCATCCCGCCCGGTAGCAGTCGCGAC TCGTCCGTATCACGAGCCTTTGATTTTCTCCATAACCCGTTTAGCGTTGCTTTCGTGGACGATAGACGCGGTTCC ATCACTCTCGTTGCTCGGCTTCGTCAGGGGCCCATGACTCGGACCTTGGCCCGGTTGGCCTCGTCTGCGGGAAAG GTGCCTCTCACCATAGACGGTCCCTACGGCTCTGTAGCCCGTCGTCTCGTCGGCTGGTCTCCTTCCCGTATCGTC GTCATCGCAGGCGGCGTCGGCGCAACCTTCTGTCTACCTCTTTACCGCTTCCTACGCGAGCAGCTCCCTACCACC ACCCGCGTCCGCCTCGTCTGGTCCGTCCGCACCCTCGCCGACGCAGCATGGGCCTCTGACGCCGGACTCCTCCCT CCCGACGACGAACATGACGATGAACATGACCATGACCATGACGGCTTCCAGCTCTATGTGTCGGGACGCCCTCTC GCTCCTGCTCTTCAAGACACAGCCGATACCGATCCGGCCGTCGAGCTGCGACCTCTCCGCAAGGCCTTACCGCCC AGACACCACCGTGGTCGTCCCCATCTGGACGAGGTTGTCGACTCCGTCTTCCGCCAGGGCGTCGAGGACTCCGTT GCCGTTCTCGTCTGCGGGCCGGTCGAAATGGCTGCCCACGTCAGAGGCTGCGTGCGTCCGTGGGCCATGCGCGGT AGAGACGTGTGGTGGCACAGCGAGAGCTTCGGCTCATGA |
Gene | >Ophcf2|03144 ATGGCCTGGACATGGACAATCCAACCCCCGACCCTCACCGAAGAAGCCAAGCACCATCGCCACACCACAATCAAC CTCTACGCCCTCACCGCCCACGCCTCCTCCCTCACCCCCCTCCTCTTCGCCCTCGTCATCAAACTCGTCCTCGTC ACCCTCACGCAGAAAACCTACGTCCCCATCCCCACCTCCCCTTCCGCCAAAGCGCAGCGACTCACACGCGCGAGA AGGGTTCGCGATGCCCTGGTGCGGCTCCGGTGGTGGCTAGACGATGACGTTGGGTTCGGGCGTCGGGATGAGTGG TTGGCTGGCATCGTTTGGCTATCATGGCTTCTCTTCCTCAGCATTCACGGGACGGGAACGGATTTCCTGCACTTC ACAAAGAGATTGGGTGCCGTGGCTGTCTCCCAACTTCCGGCACAGTACGCTCTCTCGCTCAAGGCGTTGAATCCC TACGCGCTGGCCTTTACGTCGTCGCATGAGCGGCTGAATCGCTTCCACGGCGTGTTGGGCAGGGTCATCGCCGTG CTGCTTGCTTTGCACGTCGCCTGCTATAATTACTTCTTCGTCGTGGTGGGTATATGGCCTTCTAGATTACTGGAT CGGGTCGTCGTTTACGGGCTTGTTGCCGTGGTTGCGGTGCTTGCTCTGTACCTTACCACTCTAACCTCGGTTCGA CGCGCTTCCTATCGCCTCTTTTTCATCACGCACGTCATCGTCGCTCTTCTCGTCCCCCCACTAATCTTCTTCCAC GCCCCTTCAACAAGAATCTACCTCATCGAATCTCTCCTCGCCATCCTAGCCGATCTATCCGTCCGCAAGCTCCGA TCCATCACCTCCCCCTCGACGCTCAACCTCGTCCCCGACGCCGCCCTCGTCGCCATCGAGGCACATGTCCCGCCG CGATTCCTACGCTCCGTATCCGCCTCGCCAGGCTCTCACGTCTATCTCAGCATCCCGCCCGGTAGCAGTCGCGAC TCGTCCGTATCACGAGCCTTTGATTTTCTCCATAACCCGTTTAGCGTTGCTTTCGTGGACGATAGACGCGGTTCC ATCACTCTCGTTGCTCGGCTTCGTCAGGGGCCCATGACTCGGACCTTGGCCCGGTTGGCCTCGTCTGCGGGAAAG GTGCCTCTCACCATAGACGGTCCCTACGGCTCTGTAGCCCGTCGTCTCGTCGGCTGGTCTCCTTCCCGTATCGTC GTCATCGCAGGCGGCGTCGGCGCAACCTTCTGTCTACCTCTTTACCGCTTCCTACGCGAGCAGCTCCCTACCACC ACCCGCGTCCGCCTCGTCTGGTCCGTCCGCACCCTCGCCGACGCAGCATGGGCCTCTGACGCCGGACTCCTCCCT CCCGACGACGAACATGACGATGAACATGACCATGACCATGACGGCTTCCAGCTCTATGTGTCGGGACGCCCTCTC GCTCCTGCTCTTCAAGACACAGCCGATACCGATCCGGCCGTCGAGCTGCGACCTCTCCGCAAGGCCTTACCGCCC AGACACCACCGTGGTCGTCCCCATCTGGACGAGGTTGTCGACTCCGTCTTCCGCCAGGGCGTCGAGGACTCCGTT GCCGTTCTCGTCTGCGGGCCGGTCGAAATGGCTGCCCACGTCAGAGGCTGCGTGCGTCCGTGGGCCATGCGCGGT AGAGACGTGTGGTGGCACAGCGAGAGCTTCGGCTCATGA |