Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03128
Gene name
Locationscaffold_03:723927..725547
Strand-
Gene length (bp)1620
Transcript length (bp)1620
Coding sequence length (bp)1620
Protein length (aa) 540

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13191 AAA_16 AAA ATPase domain 1.1E-08 128 278

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 56 78 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03128
MRSFWLAAKGVSRRQPIIYYRRLASSGTTKDKDASEGAKSTEPSLIVRMGESAATTFASILVLGVGFAAAGFIYH
RTYKALVVRKMTRAFEPGDPVLELAAIGHDVPNAHRPDGSSDGVDDEDHWVRRPEQEHVDAIVAGRETGRYHLLL
GDKGTGKSSMLIEAMHKVDGDGVSMLEAHADLEVVRLRLGKALDYEFHEDYIGGYFSERGPRDTTALLDIERALN
KLDKVAIRLRRQRRRPLVLIVNQLHLLRDDDDGRDLIELLQQRAEQWAAANLVTVVFNSDDYWVYERLKPLATRM
DVLAVGDLPRKQALDALRSYRRRYRGHDPSPDELEAVYGRVGGRLSFLGRVAKSGDMLATCDRIVDTERTWFLNQ
CWILGAEMDDDVMDQQKWASAAMVLAQALVDADSNDDDDDDDDDDDYETVGHRLPSFPLHEAQQIMTRSDFIRRL
DSLGLFTITSQAKVRASSVPMQRALREICAQPGFRKHLEDTLQRINDIESLGRTRELVAKDLVLGGRYDIVGAKG
AVASVKLMEAEEKD*
Coding >Ophcf2|03128
ATGCGAAGCTTTTGGCTCGCGGCCAAGGGCGTCTCTCGTCGACAGCCGATCATATACTACCGTCGACTGGCATCA
TCGGGGACGACAAAGGACAAGGATGCTTCCGAGGGAGCAAAGAGCACTGAGCCGTCTCTCATCGTTCGCATGGGC
GAATCGGCGGCCACGACTTTCGCCTCCATCTTGGTCCTCGGCGTCGGCTTCGCAGCCGCTGGCTTCATCTATCAT
CGAACTTACAAGGCCCTCGTGGTGCGCAAGATGACGCGCGCCTTTGAGCCCGGAGACCCGGTGCTGGAACTCGCG
GCTATCGGGCACGACGTACCCAACGCACATCGCCCGGATGGTAGCAGCGACGGCGTCGACGATGAAGATCACTGG
GTGCGGCGACCCGAACAGGAGCATGTCGATGCCATTGTCGCCGGCCGCGAGACTGGCCGCTATCACCTGCTTCTC
GGCGACAAGGGCACGGGGAAAAGCAGCATGTTGATCGAGGCCATGCACAAGGTCGACGGCGATGGCGTCTCTATG
CTCGAGGCTCACGCTGATCTCGAGGTGGTGCGGTTGCGGCTGGGAAAGGCGCTCGACTACGAGTTCCATGAGGAT
TACATTGGTGGCTACTTTAGCGAGCGTGGGCCCCGCGATACGACGGCTCTGCTCGATATTGAGCGTGCCCTCAAT
AAGCTGGACAAGGTGGCTATCCGGCTGCGGCGCCAGCGGAGACGGCCGCTCGTCCTCATCGTCAATCAGCTGCAT
CTGCTGCGCGACGACGATGATGGCCGTGACCTCATCGAGCTTCTGCAGCAGAGAGCTGAGCAATGGGCTGCCGCC
AATCTCGTCACCGTCGTGTTCAACTCGGACGACTACTGGGTCTACGAGAGGCTGAAGCCGCTCGCCACTCGCATG
GACGTCCTGGCCGTCGGTGACCTTCCGCGGAAGCAGGCGCTCGACGCCCTGCGGAGTTACCGCCGTCGGTATCGC
GGCCACGATCCTTCGCCGGATGAGCTCGAGGCCGTCTATGGCCGTGTCGGAGGTCGATTGTCGTTTCTGGGCCGC
GTGGCCAAGAGCGGTGACATGCTGGCGACGTGTGATCGCATCGTCGATACCGAGCGCACTTGGTTCCTCAACCAG
TGCTGGATCCTGGGCGCCGAAATGGATGACGACGTCATGGATCAGCAGAAGTGGGCGTCGGCCGCCATGGTACTC
GCCCAGGCGCTCGTCGACGCAGACTCTAACGACGACGACGACGACGACGACGACGATGACGATTACGAGACCGTG
GGCCACCGCCTCCCGTCCTTCCCGCTGCACGAGGCGCAGCAAATCATGACGCGCAGCGACTTCATCCGCCGGCTC
GACAGCCTCGGCCTCTTCACCATCACCAGCCAGGCGAAGGTCCGCGCCAGCAGCGTTCCGATGCAGCGGGCGCTG
CGCGAGATCTGCGCCCAGCCCGGGTTCCGGAAACACTTGGAAGACACGCTGCAGCGCATCAACGACATTGAGAGC
TTGGGCCGGACGCGCGAACTCGTCGCAAAGGACCTGGTGCTGGGAGGGCGGTATGACATTGTGGGCGCTAAAGGC
GCTGTTGCTTCGGTCAAGCTGATGGAGGCTGAAGAGAAGGATTAG
Transcript >Ophcf2|03128
ATGCGAAGCTTTTGGCTCGCGGCCAAGGGCGTCTCTCGTCGACAGCCGATCATATACTACCGTCGACTGGCATCA
TCGGGGACGACAAAGGACAAGGATGCTTCCGAGGGAGCAAAGAGCACTGAGCCGTCTCTCATCGTTCGCATGGGC
GAATCGGCGGCCACGACTTTCGCCTCCATCTTGGTCCTCGGCGTCGGCTTCGCAGCCGCTGGCTTCATCTATCAT
CGAACTTACAAGGCCCTCGTGGTGCGCAAGATGACGCGCGCCTTTGAGCCCGGAGACCCGGTGCTGGAACTCGCG
GCTATCGGGCACGACGTACCCAACGCACATCGCCCGGATGGTAGCAGCGACGGCGTCGACGATGAAGATCACTGG
GTGCGGCGACCCGAACAGGAGCATGTCGATGCCATTGTCGCCGGCCGCGAGACTGGCCGCTATCACCTGCTTCTC
GGCGACAAGGGCACGGGGAAAAGCAGCATGTTGATCGAGGCCATGCACAAGGTCGACGGCGATGGCGTCTCTATG
CTCGAGGCTCACGCTGATCTCGAGGTGGTGCGGTTGCGGCTGGGAAAGGCGCTCGACTACGAGTTCCATGAGGAT
TACATTGGTGGCTACTTTAGCGAGCGTGGGCCCCGCGATACGACGGCTCTGCTCGATATTGAGCGTGCCCTCAAT
AAGCTGGACAAGGTGGCTATCCGGCTGCGGCGCCAGCGGAGACGGCCGCTCGTCCTCATCGTCAATCAGCTGCAT
CTGCTGCGCGACGACGATGATGGCCGTGACCTCATCGAGCTTCTGCAGCAGAGAGCTGAGCAATGGGCTGCCGCC
AATCTCGTCACCGTCGTGTTCAACTCGGACGACTACTGGGTCTACGAGAGGCTGAAGCCGCTCGCCACTCGCATG
GACGTCCTGGCCGTCGGTGACCTTCCGCGGAAGCAGGCGCTCGACGCCCTGCGGAGTTACCGCCGTCGGTATCGC
GGCCACGATCCTTCGCCGGATGAGCTCGAGGCCGTCTATGGCCGTGTCGGAGGTCGATTGTCGTTTCTGGGCCGC
GTGGCCAAGAGCGGTGACATGCTGGCGACGTGTGATCGCATCGTCGATACCGAGCGCACTTGGTTCCTCAACCAG
TGCTGGATCCTGGGCGCCGAAATGGATGACGACGTCATGGATCAGCAGAAGTGGGCGTCGGCCGCCATGGTACTC
GCCCAGGCGCTCGTCGACGCAGACTCTAACGACGACGACGACGACGACGACGACGATGACGATTACGAGACCGTG
GGCCACCGCCTCCCGTCCTTCCCGCTGCACGAGGCGCAGCAAATCATGACGCGCAGCGACTTCATCCGCCGGCTC
GACAGCCTCGGCCTCTTCACCATCACCAGCCAGGCGAAGGTCCGCGCCAGCAGCGTTCCGATGCAGCGGGCGCTG
CGCGAGATCTGCGCCCAGCCCGGGTTCCGGAAACACTTGGAAGACACGCTGCAGCGCATCAACGACATTGAGAGC
TTGGGCCGGACGCGCGAACTCGTCGCAAAGGACCTGGTGCTGGGAGGGCGGTATGACATTGTGGGCGCTAAAGGC
GCTGTTGCTTCGGTCAAGCTGATGGAGGCTGAAGAGAAGGATTAG
Gene >Ophcf2|03128
ATGCGAAGCTTTTGGCTCGCGGCCAAGGGCGTCTCTCGTCGACAGCCGATCATATACTACCGTCGACTGGCATCA
TCGGGGACGACAAAGGACAAGGATGCTTCCGAGGGAGCAAAGAGCACTGAGCCGTCTCTCATCGTTCGCATGGGC
GAATCGGCGGCCACGACTTTCGCCTCCATCTTGGTCCTCGGCGTCGGCTTCGCAGCCGCTGGCTTCATCTATCAT
CGAACTTACAAGGCCCTCGTGGTGCGCAAGATGACGCGCGCCTTTGAGCCCGGAGACCCGGTGCTGGAACTCGCG
GCTATCGGGCACGACGTACCCAACGCACATCGCCCGGATGGTAGCAGCGACGGCGTCGACGATGAAGATCACTGG
GTGCGGCGACCCGAACAGGAGCATGTCGATGCCATTGTCGCCGGCCGCGAGACTGGCCGCTATCACCTGCTTCTC
GGCGACAAGGGCACGGGGAAAAGCAGCATGTTGATCGAGGCCATGCACAAGGTCGACGGCGATGGCGTCTCTATG
CTCGAGGCTCACGCTGATCTCGAGGTGGTGCGGTTGCGGCTGGGAAAGGCGCTCGACTACGAGTTCCATGAGGAT
TACATTGGTGGCTACTTTAGCGAGCGTGGGCCCCGCGATACGACGGCTCTGCTCGATATTGAGCGTGCCCTCAAT
AAGCTGGACAAGGTGGCTATCCGGCTGCGGCGCCAGCGGAGACGGCCGCTCGTCCTCATCGTCAATCAGCTGCAT
CTGCTGCGCGACGACGATGATGGCCGTGACCTCATCGAGCTTCTGCAGCAGAGAGCTGAGCAATGGGCTGCCGCC
AATCTCGTCACCGTCGTGTTCAACTCGGACGACTACTGGGTCTACGAGAGGCTGAAGCCGCTCGCCACTCGCATG
GACGTCCTGGCCGTCGGTGACCTTCCGCGGAAGCAGGCGCTCGACGCCCTGCGGAGTTACCGCCGTCGGTATCGC
GGCCACGATCCTTCGCCGGATGAGCTCGAGGCCGTCTATGGCCGTGTCGGAGGTCGATTGTCGTTTCTGGGCCGC
GTGGCCAAGAGCGGTGACATGCTGGCGACGTGTGATCGCATCGTCGATACCGAGCGCACTTGGTTCCTCAACCAG
TGCTGGATCCTGGGCGCCGAAATGGATGACGACGTCATGGATCAGCAGAAGTGGGCGTCGGCCGCCATGGTACTC
GCCCAGGCGCTCGTCGACGCAGACTCTAACGACGACGACGACGACGACGACGACGATGACGATTACGAGACCGTG
GGCCACCGCCTCCCGTCCTTCCCGCTGCACGAGGCGCAGCAAATCATGACGCGCAGCGACTTCATCCGCCGGCTC
GACAGCCTCGGCCTCTTCACCATCACCAGCCAGGCGAAGGTCCGCGCCAGCAGCGTTCCGATGCAGCGGGCGCTG
CGCGAGATCTGCGCCCAGCCCGGGTTCCGGAAACACTTGGAAGACACGCTGCAGCGCATCAACGACATTGAGAGC
TTGGGCCGGACGCGCGAACTCGTCGCAAAGGACCTGGTGCTGGGAGGGCGGTATGACATTGTGGGCGCTAAAGGC
GCTGTTGCTTCGGTCAAGCTGATGGAGGCTGAAGAGAAGGATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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