© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03126 |
| Gene name | |
| Location | scaffold_03:717898..719550 |
| Strand | - |
| Gene length (bp) | 1652 |
| Transcript length (bp) | 1599 |
| Coding sequence length (bp) | 1599 |
| Protein length (aa) | 533 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00067 | p450 | Cytochrome P450 | 2.1E-12 | 337 | 520 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Yes |
| GO:0020037 | heme binding | Yes |
| GO:0005506 | iron ion binding | Yes |
| GO:0004497 | monooxygenase activity | Yes |
| GO:0043169 | cation binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0046872 | metal ion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0046906 | tetrapyrrole binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0005488 | binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide | 0.2323 | 0.1348 | 0.2341 | 0.1037 | 0.3092 | 0.1155 | 0.8952 | 0.103 | 0.4278 | 0.0066 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 32 | 17 |
| 2 | 150 | 172 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 1.39 | 0.20 | 2.58 |
| Alive | In ants, during behavior modification | 4.23 | 1.34 | 7.13 |
| Dead | In ants, recently dead | 21.80 | 10.87 | 32.73 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.001043 | yes |
| Alive | Dead | 0.000238 | yes |
| Dead | Fungus | 0.000238 | yes |
| Orthofinder run ID | 4 |
| Orthogroup | 862 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03126 MELHVRRLVPGGDWAVMLAGFTAALMAVVLALTRSRRTGSRVPWPRPRQVPFGLLHTIRMAVDANGFLAGLRDRY PEGVFSLRLCGRPHHFLHGPRMATSLLNRPVTEAETLSAGLLVSNFGFSEGDRDHHARLAGESRGNFRLLMSEPG LGGLVAAVVGYVGGCASRLVCFDGGEQPEWARMAGAETVACGVVEADLMGLARNFVALTANKALFGSDFVDNMVE RGLWESLWNFDEGFLLLGLAARLPSWLSWPKLTRVKTAQRRLLGYARDFVVAMDREVAGSDPGEEWKRLGDVSAF VSARHDTYRSNGLSLAARASSDLALLWAMNANANLLVPWMLLEIYRRPALLAAIRDEIAPCMHRSTDDGVGDVDV EGLLGRCPRLKAAYVETLRVYTGPWTVRRLKEDVVVGEGKKRGFFWEGGFAHVAHEMHHMDPAYFPDPEVWACER HLREEGGEREERGGVRLVADMGTLRPYGGGPAMCKGRAFAVRELLLYAAVVVDLYEMGPVRGGEWPVPETFKVVA TRRARGR* |
| Coding | >Ophcf2|03126 ATGGAACTCCACGTCCGCCGTCTCGTCCCCGGAGGAGACTGGGCCGTCATGCTGGCCGGTTTCACCGCCGCTCTC ATGGCCGTCGTCCTGGCCTTGACCCGGAGCAGACGAACCGGAAGCCGGGTGCCGTGGCCGAGACCGCGGCAGGTC CCGTTTGGTCTTTTGCACACGATCCGAATGGCTGTCGACGCAAACGGCTTCCTGGCCGGGCTCCGGGATCGATAC CCAGAAGGCGTCTTTTCACTGCGCCTTTGCGGACGGCCACATCACTTCTTGCACGGGCCGCGGATGGCGACTTCG CTGCTGAACAGGCCCGTCACCGAGGCCGAGACCCTCTCCGCCGGACTGCTGGTATCCAACTTCGGCTTCAGCGAG GGGGATAGGGACCATCACGCCCGGCTGGCGGGGGAGTCTCGCGGCAACTTCCGGCTGCTCATGTCCGAGCCTGGA CTCGGAGGCTTGGTGGCTGCCGTGGTGGGATATGTTGGTGGTTGTGCTTCGAGGTTGGTCTGCTTCGACGGCGGG GAGCAGCCTGAATGGGCGCGGATGGCGGGTGCCGAGACGGTTGCTTGTGGTGTCGTCGAGGCGGATTTGATGGGG TTGGCGCGCAATTTCGTGGCTTTGACGGCGAATAAGGCCTTGTTTGGGAGCGATTTCGTTGATAACATGGTCGAG AGGGGGCTGTGGGAGTCTTTGTGGAATTTCGATGAGGGATTTTTGCTTCTGGGGTTGGCGGCGAGGTTGCCTAGT TGGCTTTCCTGGCCGAAACTTACGAGGGTGAAGACGGCGCAGCGAAGACTTCTCGGATATGCCCGAGATTTCGTC GTTGCTATGGATCGAGAGGTGGCGGGATCGGATCCGGGGGAGGAGTGGAAACGGCTGGGAGACGTGAGCGCTTTC GTCTCGGCCAGGCACGATACCTATCGCTCAAACGGACTCTCGCTCGCGGCCAGGGCGAGCAGCGACCTCGCCCTC TTATGGGCCATGAACGCCAACGCCAACCTCCTCGTGCCGTGGATGCTACTGGAGATATACCGACGTCCAGCGCTA CTGGCCGCCATCCGGGACGAGATTGCACCTTGTATGCACCGCTCGACGGACGACGGCGTGGGGGACGTGGACGTG GAAGGCCTGCTGGGACGATGTCCGCGCCTGAAAGCTGCGTACGTCGAGACGCTGAGGGTGTACACCGGTCCGTGG ACGGTGCGGAGGCTGAAGGAGGATGTCGTCGTTGGGGAGGGGAAGAAGAGGGGTTTCTTCTGGGAAGGGGGGTTC GCGCACGTTGCGCATGAGATGCATCATATGGATCCGGCTTATTTTCCCGACCCGGAGGTTTGGGCTTGTGAGCGG CATCTCAGAGAGGAGGGAGGGGAGAGGGAGGAGAGGGGAGGGGTGAGGCTTGTTGCTGATATGGGGACTTTGAGA CCATATGGGGGCGGGCCGGCTATGTGCAAGGGGAGGGCATTTGCCGTCCGCGAGTTGCTGCTTTACGCGGCTGTT GTTGTCGACCTTTATGAGATGGGGCCTGTGAGGGGCGGGGAGTGGCCCGTTCCGGAGACGTTCAAGGTTGTGGCG ACGAGGAGGGCGAGGGGGAGGTGA |
| Transcript | >Ophcf2|03126 ATGGAACTCCACGTCCGCCGTCTCGTCCCCGGAGGAGACTGGGCCGTCATGCTGGCCGGTTTCACCGCCGCTCTC ATGGCCGTCGTCCTGGCCTTGACCCGGAGCAGACGAACCGGAAGCCGGGTGCCGTGGCCGAGACCGCGGCAGGTC CCGTTTGGTCTTTTGCACACGATCCGAATGGCTGTCGACGCAAACGGCTTCCTGGCCGGGCTCCGGGATCGATAC CCAGAAGGCGTCTTTTCACTGCGCCTTTGCGGACGGCCACATCACTTCTTGCACGGGCCGCGGATGGCGACTTCG CTGCTGAACAGGCCCGTCACCGAGGCCGAGACCCTCTCCGCCGGACTGCTGGTATCCAACTTCGGCTTCAGCGAG GGGGATAGGGACCATCACGCCCGGCTGGCGGGGGAGTCTCGCGGCAACTTCCGGCTGCTCATGTCCGAGCCTGGA CTCGGAGGCTTGGTGGCTGCCGTGGTGGGATATGTTGGTGGTTGTGCTTCGAGGTTGGTCTGCTTCGACGGCGGG GAGCAGCCTGAATGGGCGCGGATGGCGGGTGCCGAGACGGTTGCTTGTGGTGTCGTCGAGGCGGATTTGATGGGG TTGGCGCGCAATTTCGTGGCTTTGACGGCGAATAAGGCCTTGTTTGGGAGCGATTTCGTTGATAACATGGTCGAG AGGGGGCTGTGGGAGTCTTTGTGGAATTTCGATGAGGGATTTTTGCTTCTGGGGTTGGCGGCGAGGTTGCCTAGT TGGCTTTCCTGGCCGAAACTTACGAGGGTGAAGACGGCGCAGCGAAGACTTCTCGGATATGCCCGAGATTTCGTC GTTGCTATGGATCGAGAGGTGGCGGGATCGGATCCGGGGGAGGAGTGGAAACGGCTGGGAGACGTGAGCGCTTTC GTCTCGGCCAGGCACGATACCTATCGCTCAAACGGACTCTCGCTCGCGGCCAGGGCGAGCAGCGACCTCGCCCTC TTATGGGCCATGAACGCCAACGCCAACCTCCTCGTGCCGTGGATGCTACTGGAGATATACCGACGTCCAGCGCTA CTGGCCGCCATCCGGGACGAGATTGCACCTTGTATGCACCGCTCGACGGACGACGGCGTGGGGGACGTGGACGTG GAAGGCCTGCTGGGACGATGTCCGCGCCTGAAAGCTGCGTACGTCGAGACGCTGAGGGTGTACACCGGTCCGTGG ACGGTGCGGAGGCTGAAGGAGGATGTCGTCGTTGGGGAGGGGAAGAAGAGGGGTTTCTTCTGGGAAGGGGGGTTC GCGCACGTTGCGCATGAGATGCATCATATGGATCCGGCTTATTTTCCCGACCCGGAGGTTTGGGCTTGTGAGCGG CATCTCAGAGAGGAGGGAGGGGAGAGGGAGGAGAGGGGAGGGGTGAGGCTTGTTGCTGATATGGGGACTTTGAGA CCATATGGGGGCGGGCCGGCTATGTGCAAGGGGAGGGCATTTGCCGTCCGCGAGTTGCTGCTTTACGCGGCTGTT GTTGTCGACCTTTATGAGATGGGGCCTGTGAGGGGCGGGGAGTGGCCCGTTCCGGAGACGTTCAAGGTTGTGGCG ACGAGGAGGGCGAGGGGGAGGTGA |
| Gene | >Ophcf2|03126 ATGGAACTCCACGTCCGCCGTCTCGTCCCCGGAGGAGACTGGGCCGTCATGCTGGCCGGTTTCACCGCCGCTCTC ATGGCCGTCGTCCTGGCCTTGACCCGGAGCAGACGAACCGGAAGCCGGGTGCCGTGGCCGAGACCGCGGCAGGTC CCGTTTGGTCTTTTGCACACGATCCGAATGGCTGTCGACGCAAACGGCTTCCTGGCCGGGCTCCGGGATCGATAC CCAGAAGGCGTCTTTTCACTGCGCCTTTGCGGACGGCCACATCACTTCTTGCACGGGCCGCGGATGGCGACTTCG CTGCTGAACAGGCCCGTCACCGAGGCCGAGACCCTCTCCGCCGGACTGCTGGTATCCAACTTCGGCTTCAGCGAG GGGGATAGGGACCATCACGCCCGGCTGGCGGGGGAGTCTCGCGGCAACTTCCGGCTGCTCATGTCCGAGCCTGGA CTCGGAGGCTTGGTGGCTGCCGTGGTGGGATATGTTGGTGGTTGTGCTTCGAGGTTGGTCTGCTTCGACGGCGGG GAGCAGCCTGAATGGGCGCGGATGGCGGGTGCCGAGACGGTTGCTTGTGGTGTCGTCGAGGCGGATTTGATGGGG TTGGCGCGCAATTTCGTGGCTTTGACGGCGAATAAGGCCTTGTTTGGGAGCGATTTCGTTGATAACATGGTCGAG AGGGGGCTGTGGGAGTCTTTGTGGAATTTCGATGAGGGATTTTTGCTTCTGGGGTTGGCGGCGAGGTTGCCTAGT TGGCTTTCCTGGCCGAAACTTACGAGGGTGAAGACGGCGCAGCGAAGACTTCTCGGATATGCCCGAGATTTCGTC GTTGCTATGGATCGAGAGGTGGCGGGATCGGATCCGGGGGAGGAGTGGAAACGGCTGGGAGACGTGAGCGCTTTC GTCTCGGCCAGGCACGATACCTATCGCTCAAACGGACTCTCGCTCGCGGCCAGGGCGAGCAGCGACCTCGCCCTC TTATGGGCCATGAACGCCAACGCCAACCTCCTCGTGCCGTGGATGCTACTGGAGATATACCGACGTCCAGCGCTA CTGGCCGCCATCCGGGACGAGATTGCACCTTGTATGCACCGCTCGACGGACGACGGCGTGGGGGACGTGGACGTG GAAGGCCTGCTGGGACGATGTCCGCGCCTGAAAGCTGCGTACGTCGAGACGCTGAGGGTGTACACCGGTCCGTGG ACGGTGCGGAGGCTGAAGGAGGATGTCGTCGTTGGGGAGGGGAAGAAGAGGGGTTTCTTCTGGGAAGGGGGGTTC GCGCACGTTGCGCATGAGATGCATCATATGGATCCGGCTTATTTTCCCGACCCGGAGGTTTGGGCTTGTGAGCGG CATCTCAGAGAGGAGGGAGGGGAGAGGGAGGAGAGGGGAGGGGTGAGGCTTGTTGCTGATATGGGGACTTTGAGA CCATATGGTGAGTTTCCTGATGTCCGCTCTTGGAATCGATGGGGGCTGACCGGTTGAAAGGGGGCGGGCCGGCTA TGTGCAAGGGGAGGGCATTTGCCGTCCGCGAGTTGCTGCTTTACGCGGCTGTTGTTGTCGACCTTTATGAGATGG GGCCTGTGAGGGGCGGGGAGTGGCCCGTTCCGGAGACGTTCAAGGTTGTGGCGACGAGGAGGGCGAGGGGGAGGT GA |