Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03122
Gene name
Locationscaffold_03:710274..711593
Strand+
Gene length (bp)1319
Transcript length (bp)1101
Coding sequence length (bp)1101
Protein length (aa) 367

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03151 TPT Triose-phosphate Transporter family 8.8E-25 19 304

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 15 34 19
2 41 63 22
3 83 105 22
4 110 132 22
5 137 156 19
6 161 183 22
7 198 220 22
8 232 254 22
9 259 281 22
10 333 355 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03122
MDVEKQVPVGGRGLHPSLHIVNWMLWSNLTVLFNKAIIDTGFRYPILLTCWHLIFASIATQLLARYTPLLDSRHS
LAMTSRLYLPTLLPIGIFYSGSLVCSNLVYLHLSVAFTQMLKSAAPVVALFVAWAWRLQEPSVGALVNMLVMMAG
VGMASVGEVRFSLVGFLLQLAGTIFEVIRLAMIQVMLSNKGLKMEPLVGLYYYAPICAAMNVFVAIPTELPYFRR
EHLTPWLAGVLVLNALTAFMLNIASVFLIGKTSGLTMTMAGILKNMLLIVASVLIWQTRITLLQAAGYSLALAGL
VYYSAGREVLARARQVSASAAAVLAEWCLDNRVGIIVLTGCASLVMVYGLLRLYGAAAGELVLSMA*
Coding >Ophcf2|03122
ATGGACGTCGAAAAGCAAGTGCCTGTCGGTGGCAGGGGCTTGCATCCGAGTCTTCACATTGTGAACTGGATGCTG
TGGTCGAATCTGACGGTGCTCTTCAACAAGGCCATCATCGACACTGGCTTCAGATATCCTATACTGCTCACCTGC
TGGCATCTCATCTTCGCCTCCATTGCCACGCAGCTTCTGGCACGATACACGCCGCTCCTCGACTCGCGTCACTCC
CTAGCCATGACGAGTCGTCTATATCTTCCGACGCTGTTGCCCATCGGCATCTTCTACAGCGGCTCGCTCGTGTGT
TCCAACCTCGTCTACCTCCATCTGTCAGTGGCCTTTACCCAGATGCTCAAGTCGGCCGCGCCCGTCGTCGCCTTG
TTCGTAGCCTGGGCCTGGCGCCTCCAGGAGCCGTCGGTCGGGGCGCTGGTCAATATGCTCGTCATGATGGCCGGG
GTGGGTATGGCTTCCGTCGGAGAGGTACGCTTCTCTCTGGTCGGCTTCCTCTTACAGCTCGCCGGCACCATCTTC
GAGGTCATCCGTCTGGCCATGATTCAGGTCATGCTCAGCAACAAGGGGCTCAAGATGGAGCCGCTCGTCGGACTG
TATTACTATGCGCCGATTTGCGCGGCCATGAACGTCTTTGTCGCTATCCCCACCGAGCTGCCCTACTTTCGACGG
GAGCATCTGACGCCGTGGCTGGCAGGGGTGTTGGTCCTCAATGCCCTGACGGCGTTTATGCTCAATATTGCCAGC
GTCTTTCTGATTGGAAAGACGTCTGGCTTGACGATGACGATGGCGGGCATCCTGAAGAACATGCTGCTCATCGTC
GCCTCGGTCCTCATCTGGCAAACGCGCATCACGCTGCTACAGGCTGCGGGCTATAGCCTCGCCCTGGCCGGTCTG
GTCTACTACTCAGCGGGCCGCGAAGTCCTGGCACGCGCACGACAGGTCTCCGCCAGCGCGGCCGCAGTGCTAGCG
GAGTGGTGTCTTGACAACAGGGTCGGCATCATCGTCCTCACCGGCTGCGCGTCCCTAGTCATGGTCTACGGACTT
TTACGGCTGTACGGCGCGGCGGCGGGCGAGCTGGTCTTGTCAATGGCGTGA
Transcript >Ophcf2|03122
ATGGACGTCGAAAAGCAAGTGCCTGTCGGTGGCAGGGGCTTGCATCCGAGTCTTCACATTGTGAACTGGATGCTG
TGGTCGAATCTGACGGTGCTCTTCAACAAGGCCATCATCGACACTGGCTTCAGATATCCTATACTGCTCACCTGC
TGGCATCTCATCTTCGCCTCCATTGCCACGCAGCTTCTGGCACGATACACGCCGCTCCTCGACTCGCGTCACTCC
CTAGCCATGACGAGTCGTCTATATCTTCCGACGCTGTTGCCCATCGGCATCTTCTACAGCGGCTCGCTCGTGTGT
TCCAACCTCGTCTACCTCCATCTGTCAGTGGCCTTTACCCAGATGCTCAAGTCGGCCGCGCCCGTCGTCGCCTTG
TTCGTAGCCTGGGCCTGGCGCCTCCAGGAGCCGTCGGTCGGGGCGCTGGTCAATATGCTCGTCATGATGGCCGGG
GTGGGTATGGCTTCCGTCGGAGAGGTACGCTTCTCTCTGGTCGGCTTCCTCTTACAGCTCGCCGGCACCATCTTC
GAGGTCATCCGTCTGGCCATGATTCAGGTCATGCTCAGCAACAAGGGGCTCAAGATGGAGCCGCTCGTCGGACTG
TATTACTATGCGCCGATTTGCGCGGCCATGAACGTCTTTGTCGCTATCCCCACCGAGCTGCCCTACTTTCGACGG
GAGCATCTGACGCCGTGGCTGGCAGGGGTGTTGGTCCTCAATGCCCTGACGGCGTTTATGCTCAATATTGCCAGC
GTCTTTCTGATTGGAAAGACGTCTGGCTTGACGATGACGATGGCGGGCATCCTGAAGAACATGCTGCTCATCGTC
GCCTCGGTCCTCATCTGGCAAACGCGCATCACGCTGCTACAGGCTGCGGGCTATAGCCTCGCCCTGGCCGGTCTG
GTCTACTACTCAGCGGGCCGCGAAGTCCTGGCACGCGCACGACAGGTCTCCGCCAGCGCGGCCGCAGTGCTAGCG
GAGTGGTGTCTTGACAACAGGGTCGGCATCATCGTCCTCACCGGCTGCGCGTCCCTAGTCATGGTCTACGGACTT
TTACGGCTGTACGGCGCGGCGGCGGGCGAGCTGGTCTTGTCAATGGCGTGA
Gene >Ophcf2|03122
ATGGACGTCGAAAAGCAAGTGCCTGTCGGTGGCAGGGGCTTGCATCCGAGTCTTCACATTGTGTTCGTTGAGAGC
CTGGTTTCCTTGTTAGACGAGGAGGGTATTCGCTGACGGCGTAGGAACTGGATGCTGTGGTCGAATCTGACGGTG
CTCTTCAACAAGGCCATCATCGACACTGGCTTCAGTAAGTTTGCGGGAGGATTGATGGAAGCGGCTAACGTCTTC
AACAGGATATCGTCCGTCAGCTCTCTTGACTCCATGTCTATGCGATGGAGGCTGACTCTAACAGCTATACTGCTC
ACCTGCTGGCATCTCATCTTCGCCTCCATTGCCACGCAGCTTCTGGCACGATACACGCCGCTCCTCGACTCGCGT
CACTCCCTAGCCATGACGAGTCGTCTATATCTTCCGACGCTGTTGCCCATCGGCATCTTCTACAGCGGCTCGCTC
GTGTGTTCCAACCTCGTCTACCTCCATCTGTCAGTGGCCTTTACCCAGATGCTCAAGTCGGCCGCGCCCGTCGTC
GCCTTGTTCGTAGCCTGGGCCTGGCGCCTCCAGGAGCCGTCGGTCGGGGCGCTGGTCAATATGCTCGTCATGATG
GCCGGGGTGGGTATGGCTTCCGTCGGAGAGGTACGCTTCTCTCTGGTCGGCTTCCTCTTACAGCTCGCCGGCACC
ATCTTCGAGGTCATCCGTCTGGCCATGATTCAGGTCATGCTCAGCAACAAGGGGCTCAAGATGGAGCCGCTCGTC
GGACTGTATTACTATGCGCCGATTTGCGCGGCCATGAACGTCTTTGTCGCTATCCCCACCGAGCTGCCCTACTTT
CGACGGGAGCATCTGACGCCGTGGCTGGCAGGGGTGTTGGTCCTCAATGCCCTGACGGCGTTTATGCTCAATATT
GCCAGCGTCTTTCTGGTGAGTCGGATGACTTGGTTTCCACCTGTCGTGTCTCTGACGTGGGTATGTGTGCATATA
AGATTGGAAAGACGTCTGGCTTGACGATGACGATGGCGGGCATCCTGAAGAACATGCTGCTCATCGTCGCCTCGG
TCCTCATCTGGCAAACGCGCATCACGCTGCTACAGGCTGCGGGCTATAGCCTCGCCCTGGCCGGTCTGGTCTACT
ACTCAGCGGGCCGCGAAGTCCTGGCACGCGCACGACAGGTCTCCGCCAGCGCGGCCGCAGTGCTAGCGGAGTGGT
GTCTTGACAACAGGGTCGGCATCATCGTCCTCACCGGCTGCGCGTCCCTAGTCATGGTCTACGGACTTTTACGGC
TGTACGGCGCGGCGGCGGGCGAGCTGGTCTTGTCAATGGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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