Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03098
Gene name
Locationscaffold_03:651027..652333
Strand+
Gene length (bp)1306
Transcript length (bp)1179
Coding sequence length (bp)1179
Protein length (aa) 393

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11927 DUF3445 Protein of unknown function (DUF3445) 5.9E-73 113 346

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 2 19 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03098
MAFIFPAIALATFGLALFLRRLLRKPGHLTTASPNQDVPILGLRDDYRLADASVRLLSGFTVGQVRALGSFPDYA
KLSGVPLPSAVSASFRIEDAAPRPYRPLRWPYHQTMALQKLDPDYWLELESTYRSRIRQRQDLHAQHGSDILNSL
PGSELAQRELMEMALQFLCARYPQYFELRGQTFVNRLLATEHHLDRVSPLKVLLDNVPEDFAIMMRDERTGRYVL
RAGVICSTIGWHIGQKMGMGLSEIHGEVPDFEEKLSLSVDRFFNRLPADSPVSRGSWSLETGSPLFLPPTDPNLQ
LRKSQDAKLRIEDVTLRVDWQTLRRLPLSSAVVFNFKALFTPLPRLRHEPYVPALLLRILEGGKDSLMAYKGSWH
VEHLVRPVLGGVGEGAG*
Coding >Ophcf2|03098
ATGGCTTTCATCTTCCCAGCCATAGCCCTCGCCACCTTCGGATTAGCCCTCTTCCTCCGAAGGCTCCTCCGCAAG
CCTGGCCATCTCACGACAGCCTCGCCAAACCAGGACGTACCCATCCTCGGTCTCCGAGACGACTACCGCCTCGCC
GACGCTTCGGTCCGGCTTCTTAGCGGCTTCACCGTCGGTCAGGTCCGGGCTCTCGGCTCGTTCCCCGATTACGCG
AAGCTCTCGGGCGTGCCGCTTCCGTCAGCCGTTTCCGCCTCGTTCCGGATTGAAGATGCGGCGCCTCGGCCGTAT
AGACCGCTTCGATGGCCATATCATCAGACGATGGCCCTTCAGAAACTCGATCCGGACTACTGGCTTGAACTGGAA
AGCACATACCGCTCTCGAATCCGCCAACGACAAGACCTACATGCCCAACACGGAAGTGATATCCTCAACAGCTTA
CCAGGCTCAGAGCTGGCGCAGAGGGAGTTGATGGAGATGGCGCTGCAGTTTCTCTGCGCGCGATACCCGCAGTAC
TTTGAGCTGCGAGGACAGACGTTTGTCAACCGTCTTCTCGCGACGGAGCATCATCTAGATCGAGTTTCGCCGCTA
AAGGTCCTGTTGGATAACGTGCCCGAGGACTTTGCCATCATGATGAGGGATGAGAGGACGGGACGGTATGTGTTG
AGGGCGGGGGTCATTTGCTCGACGATTGGGTGGCATATCGGGCAGAAGATGGGCATGGGGCTTTCGGAGATTCAC
GGGGAGGTGCCGGATTTTGAAGAGAAGCTTAGTTTGAGCGTTGATCGCTTCTTCAACAGGTTACCGGCTGACAGT
CCCGTCTCGAGAGGATCCTGGAGTCTCGAAACCGGCTCGCCACTCTTCCTCCCACCCACAGACCCAAACCTCCAG
CTCCGCAAGAGCCAAGACGCCAAGCTACGAATCGAAGACGTGACGCTACGCGTAGACTGGCAGACGCTACGCCGC
CTCCCCCTCTCCTCAGCCGTAGTCTTCAACTTCAAGGCGCTCTTCACGCCGCTGCCACGGCTCCGACACGAGCCG
TACGTCCCCGCCCTGCTGCTTCGCATCCTGGAGGGGGGGAAGGATAGCCTGATGGCGTATAAGGGGTCGTGGCAT
GTTGAGCATCTTGTCAGGCCTGTGCTCGGGGGGGTGGGCGAGGGAGCAGGTTGA
Transcript >Ophcf2|03098
ATGGCTTTCATCTTCCCAGCCATAGCCCTCGCCACCTTCGGATTAGCCCTCTTCCTCCGAAGGCTCCTCCGCAAG
CCTGGCCATCTCACGACAGCCTCGCCAAACCAGGACGTACCCATCCTCGGTCTCCGAGACGACTACCGCCTCGCC
GACGCTTCGGTCCGGCTTCTTAGCGGCTTCACCGTCGGTCAGGTCCGGGCTCTCGGCTCGTTCCCCGATTACGCG
AAGCTCTCGGGCGTGCCGCTTCCGTCAGCCGTTTCCGCCTCGTTCCGGATTGAAGATGCGGCGCCTCGGCCGTAT
AGACCGCTTCGATGGCCATATCATCAGACGATGGCCCTTCAGAAACTCGATCCGGACTACTGGCTTGAACTGGAA
AGCACATACCGCTCTCGAATCCGCCAACGACAAGACCTACATGCCCAACACGGAAGTGATATCCTCAACAGCTTA
CCAGGCTCAGAGCTGGCGCAGAGGGAGTTGATGGAGATGGCGCTGCAGTTTCTCTGCGCGCGATACCCGCAGTAC
TTTGAGCTGCGAGGACAGACGTTTGTCAACCGTCTTCTCGCGACGGAGCATCATCTAGATCGAGTTTCGCCGCTA
AAGGTCCTGTTGGATAACGTGCCCGAGGACTTTGCCATCATGATGAGGGATGAGAGGACGGGACGGTATGTGTTG
AGGGCGGGGGTCATTTGCTCGACGATTGGGTGGCATATCGGGCAGAAGATGGGCATGGGGCTTTCGGAGATTCAC
GGGGAGGTGCCGGATTTTGAAGAGAAGCTTAGTTTGAGCGTTGATCGCTTCTTCAACAGGTTACCGGCTGACAGT
CCCGTCTCGAGAGGATCCTGGAGTCTCGAAACCGGCTCGCCACTCTTCCTCCCACCCACAGACCCAAACCTCCAG
CTCCGCAAGAGCCAAGACGCCAAGCTACGAATCGAAGACGTGACGCTACGCGTAGACTGGCAGACGCTACGCCGC
CTCCCCCTCTCCTCAGCCGTAGTCTTCAACTTCAAGGCGCTCTTCACGCCGCTGCCACGGCTCCGACACGAGCCG
TACGTCCCCGCCCTGCTGCTTCGCATCCTGGAGGGGGGGAAGGATAGCCTGATGGCGTATAAGGGGTCGTGGCAT
GTTGAGCATCTTGTCAGGCCTGTGCTCGGGGGGGTGGGCGAGGGAGCAGGTTGA
Gene >Ophcf2|03098
ATGGCTTTCATCTTCCCAGCCATAGCCCTCGCCACCTTCGGATTAGCCCTCTTCCTCCGAAGGCTCCTCCGCAAG
CCTGGCCATCTCACGACAGCCTCGCCAAACCAGGACGTACCCATCCTCGGTCTCCGAGACGACTACCGCCTCGCC
GACGCTTCGGTCCGGCTTCTTAGCGGCTTCACCGTCGGTCAGGTCCGGGCTCTCGGCTCGTTCCCCGATTACGCG
AAGCTCTCGGGCGTGCCGCTTCCGTCAGCCGTTTCCGCCTCGTTCCGGATTGAAGATGCGGCGCCTCGGCCGTAT
AGACCGCTTCGATGGCCATATCATCAGACGATGGGTGCGATGTTCTAGATGGACGTGTCTCCGATTCGTCATAAC
TAACTAGTTGAGAAGCCCTTCAGAAACTCGATCCGGACTACTGGCTTGAACTGGAAAGCACATACCGCTCTCGAA
TCCGCCAACGACAAGACCTACATGCCCAACACGGAAGTGATATCCTCAACAGCTTACCAGGCTCAGAGCTGGCGC
AGAGGGAGTTGATGGAGATGGCGCTGCAGTTTCTCTGCGCGCGATACCCGCAGTACTTTGAGCTGCGAGGACAGA
CGTTTGTCAACCGTCTTCTCGCGACGGAGCATCATCTAGATCGAGTTTCGCCGCTAAAGGTCCTGTTGGATAACG
TGCCCGAGGACTTTGCCATCATGATGAGGGATGAGAGGACGGGACGGTATGTGTTGAGGGCGGGGGTCATTTGCT
CGACGATTGGGTGGCATATCGGGCAGAAGATGGGCATGGGGCTTTCGGAGATTCACGGGGAGGTGCCGGATTTTG
AAGAGAAGCTTAGTTTGAGCGTTGATCGGTGAGTTTTCTCTCTCTCTCTCTCTCTCTCTCAGATGCCTGTTGTTG
TTTTGGAGTGCTGATGAGAGACAGCTTCTTCAACAGGTTACCGGCTGACAGTCCCGTCTCGAGAGGATCCTGGAG
TCTCGAAACCGGCTCGCCACTCTTCCTCCCACCCACAGACCCAAACCTCCAGCTCCGCAAGAGCCAAGACGCCAA
GCTACGAATCGAAGACGTGACGCTACGCGTAGACTGGCAGACGCTACGCCGCCTCCCCCTCTCCTCAGCCGTAGT
CTTCAACTTCAAGGCGCTCTTCACGCCGCTGCCACGGCTCCGACACGAGCCGTACGTCCCCGCCCTGCTGCTTCG
CATCCTGGAGGGGGGGAAGGATAGCCTGATGGCGTATAAGGGGTCGTGGCATGTTGAGCATCTTGTCAGGCCTGT
GCTCGGGGGGGTGGGCGAGGGAGCAGGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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