© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03096 |
| Gene name | |
| Location | scaffold_03:642195..644106 |
| Strand | - |
| Gene length (bp) | 1911 |
| Transcript length (bp) | 1764 |
| Coding sequence length (bp) | 1764 |
| Protein length (aa) | 588 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.0E-18 | 72 | 491 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 1.1E-07 | 119 | 511 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 65 | 87 | 22 |
| 2 | 102 | 121 | 19 |
| 3 | 133 | 152 | 19 |
| 4 | 157 | 179 | 22 |
| 5 | 192 | 214 | 22 |
| 6 | 224 | 246 | 22 |
| 7 | 277 | 299 | 22 |
| 8 | 304 | 326 | 22 |
| 9 | 345 | 367 | 22 |
| 10 | 382 | 404 | 22 |
| 11 | 413 | 432 | 19 |
| 12 | 447 | 469 | 22 |
| 13 | 476 | 498 | 22 |
| 14 | 552 | 571 | 19 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 306.26 | 146.80 | 465.71 |
| Alive | In ants, during behavior modification | 87.35 | 42.76 | 131.93 |
| Dead | In ants, recently dead | 76.71 | 41.76 | 111.67 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.000238 | yes |
| Alive | Dead | 0.528951 | no |
| Dead | Fungus | 0.000238 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03096 MGTKTTRRLFGRAAEESPRSKEADAKTDSPLADETGPDGDAVSPDAQTGVQKAEAMTKAWTTRSLIVAYILIWLI YFVDSLQQGVTTALHPFITSAFQQHSLTAATGIMSNLMGGLLKLPLAKILDIWGRPQGFALTTVLLTLGLVMMAA CNTVETYAAAQVFYWVGFNGMGYSLSVFIADTSALENRGLMLAFLYSPFIITAWTGGPIATSVMPGIGWRWFFGI FAIITLAVSLPLIALFAYNLVKAKRLGLMPARDGPRRGLLQATRHFLIEFDVIGLLLITGGLALFLLPFSIYTYQ PARWRSPLIICMLVFGVLLLVCFALYEKLVAPVQFLPYRLLVDRTILGAMVSATMTFIAFFLWDSYLLSLLQVVN DLSLTDATYIIKIFTVGSCFSGLIVGLLIRWSGRFKWLALYFGLPLTILGVGLMMHFGQPHSPIGYVIMCQIFIA LAGGAITICEQTAVLAVISHQHAAVVLAVLSMCSSVGGAIGSTLSAAIWTTVLPRKLEELLPAEAQSNRTTIYND LVAQLSYPRGSPVREAISEAYSETQKIMIISAIVALFVALAAVFAWRDVRVKDSKQTKGTVV* |
| Coding | >Ophcf2|03096 ATGGGCACCAAGACAACCCGTCGTCTCTTCGGCCGCGCCGCAGAAGAATCCCCGCGGTCCAAAGAAGCCGACGCA AAGACCGACAGCCCCTTGGCCGACGAGACCGGCCCCGATGGCGACGCCGTCTCTCCCGACGCCCAGACCGGCGTC CAGAAGGCAGAGGCCATGACCAAGGCGTGGACGACAAGATCGCTGATTGTGGCATACATCTTAATCTGGCTCATC TACTTTGTCGACTCGCTGCAGCAGGGCGTCACCACGGCTCTTCATCCCTTCATCACCAGCGCCTTCCAACAACAT TCGCTCACGGCGGCGACGGGAATCATGTCCAATCTCATGGGCGGCCTGTTGAAGCTGCCGCTGGCAAAGATTCTC GACATCTGGGGCCGCCCTCAGGGTTTCGCCCTCACCACGGTGCTGCTGACGCTCGGCCTCGTCATGATGGCAGCA TGCAACACGGTCGAGACCTACGCCGCTGCCCAAGTCTTTTACTGGGTCGGTTTTAACGGAATGGGCTACAGCCTC TCCGTCTTCATCGCCGACACGTCGGCGCTCGAGAACCGCGGCCTCATGTTGGCTTTCCTCTACTCGCCCTTCATC ATCACCGCCTGGACCGGCGGCCCCATCGCGACCAGTGTTATGCCCGGCATCGGCTGGCGCTGGTTCTTTGGCATC TTCGCCATCATCACCCTCGCCGTCTCCCTGCCCCTAATCGCCCTCTTCGCCTACAACCTCGTCAAGGCCAAGAGA TTGGGCCTGATGCCCGCTCGCGACGGGCCCCGACGCGGCCTGCTACAGGCCACGCGCCATTTCCTGATCGAGTTC GATGTCATCGGCCTGCTGCTCATCACTGGCGGTCTCGCCCTCTTTCTGCTGCCCTTTAGCATCTATACGTATCAG CCAGCCAGGTGGCGATCTCCCCTAATCATCTGCATGCTCGTCTTCGGCGTCTTGCTGCTCGTCTGCTTCGCTCTG TACGAGAAGCTCGTTGCGCCCGTCCAATTCCTCCCGTACCGGCTGCTGGTAGACCGCACCATCCTCGGCGCCATG GTGTCGGCCACGATGACATTCATCGCCTTTTTCCTCTGGGATAGTTACCTGCTATCGCTTCTGCAGGTTGTGAAC GACTTGTCGCTGACGGACGCGACGTACATCATCAAGATCTTCACCGTCGGCAGCTGTTTCTCCGGTCTCATCGTC GGCCTCCTGATCCGATGGTCGGGCCGTTTCAAGTGGCTGGCTCTCTACTTTGGCCTGCCGCTCACCATCCTAGGC GTCGGCCTCATGATGCACTTCGGCCAGCCTCACAGCCCCATCGGCTACGTCATCATGTGCCAGATCTTCATCGCC CTGGCCGGGGGAGCCATCACCATCTGCGAGCAAACAGCCGTCTTGGCCGTCATCTCCCACCAGCACGCCGCCGTC GTCCTGGCCGTCCTATCCATGTGCTCGTCAGTCGGGGGCGCCATCGGCAGCACGCTATCAGCCGCCATCTGGACC ACCGTCCTTCCCCGCAAGCTGGAAGAGCTGCTCCCGGCCGAGGCCCAGTCCAACCGGACGACCATCTACAACGAC CTGGTAGCTCAGCTATCGTACCCCAGGGGATCACCCGTGCGCGAGGCCATCAGCGAGGCCTACAGCGAGACGCAG AAGATCATGATCATCTCCGCCATCGTCGCCTTGTTCGTGGCGCTGGCGGCCGTCTTTGCCTGGCGGGACGTTCGC GTCAAGGACTCCAAGCAGACCAAGGGGACGGTCGTATAG |
| Transcript | >Ophcf2|03096 ATGGGCACCAAGACAACCCGTCGTCTCTTCGGCCGCGCCGCAGAAGAATCCCCGCGGTCCAAAGAAGCCGACGCA AAGACCGACAGCCCCTTGGCCGACGAGACCGGCCCCGATGGCGACGCCGTCTCTCCCGACGCCCAGACCGGCGTC CAGAAGGCAGAGGCCATGACCAAGGCGTGGACGACAAGATCGCTGATTGTGGCATACATCTTAATCTGGCTCATC TACTTTGTCGACTCGCTGCAGCAGGGCGTCACCACGGCTCTTCATCCCTTCATCACCAGCGCCTTCCAACAACAT TCGCTCACGGCGGCGACGGGAATCATGTCCAATCTCATGGGCGGCCTGTTGAAGCTGCCGCTGGCAAAGATTCTC GACATCTGGGGCCGCCCTCAGGGTTTCGCCCTCACCACGGTGCTGCTGACGCTCGGCCTCGTCATGATGGCAGCA TGCAACACGGTCGAGACCTACGCCGCTGCCCAAGTCTTTTACTGGGTCGGTTTTAACGGAATGGGCTACAGCCTC TCCGTCTTCATCGCCGACACGTCGGCGCTCGAGAACCGCGGCCTCATGTTGGCTTTCCTCTACTCGCCCTTCATC ATCACCGCCTGGACCGGCGGCCCCATCGCGACCAGTGTTATGCCCGGCATCGGCTGGCGCTGGTTCTTTGGCATC TTCGCCATCATCACCCTCGCCGTCTCCCTGCCCCTAATCGCCCTCTTCGCCTACAACCTCGTCAAGGCCAAGAGA TTGGGCCTGATGCCCGCTCGCGACGGGCCCCGACGCGGCCTGCTACAGGCCACGCGCCATTTCCTGATCGAGTTC GATGTCATCGGCCTGCTGCTCATCACTGGCGGTCTCGCCCTCTTTCTGCTGCCCTTTAGCATCTATACGTATCAG CCAGCCAGGTGGCGATCTCCCCTAATCATCTGCATGCTCGTCTTCGGCGTCTTGCTGCTCGTCTGCTTCGCTCTG TACGAGAAGCTCGTTGCGCCCGTCCAATTCCTCCCGTACCGGCTGCTGGTAGACCGCACCATCCTCGGCGCCATG GTGTCGGCCACGATGACATTCATCGCCTTTTTCCTCTGGGATAGTTACCTGCTATCGCTTCTGCAGGTTGTGAAC GACTTGTCGCTGACGGACGCGACGTACATCATCAAGATCTTCACCGTCGGCAGCTGTTTCTCCGGTCTCATCGTC GGCCTCCTGATCCGATGGTCGGGCCGTTTCAAGTGGCTGGCTCTCTACTTTGGCCTGCCGCTCACCATCCTAGGC GTCGGCCTCATGATGCACTTCGGCCAGCCTCACAGCCCCATCGGCTACGTCATCATGTGCCAGATCTTCATCGCC CTGGCCGGGGGAGCCATCACCATCTGCGAGCAAACAGCCGTCTTGGCCGTCATCTCCCACCAGCACGCCGCCGTC GTCCTGGCCGTCCTATCCATGTGCTCGTCAGTCGGGGGCGCCATCGGCAGCACGCTATCAGCCGCCATCTGGACC ACCGTCCTTCCCCGCAAGCTGGAAGAGCTGCTCCCGGCCGAGGCCCAGTCCAACCGGACGACCATCTACAACGAC CTGGTAGCTCAGCTATCGTACCCCAGGGGATCACCCGTGCGCGAGGCCATCAGCGAGGCCTACAGCGAGACGCAG AAGATCATGATCATCTCCGCCATCGTCGCCTTGTTCGTGGCGCTGGCGGCCGTCTTTGCCTGGCGGGACGTTCGC GTCAAGGACTCCAAGCAGACCAAGGGGACGGTCGTATAG |
| Gene | >Ophcf2|03096 ATGGGCACCAAGACAACCCGTCGTCTCTTCGGCCGCGCCGCAGAAGAATCCCCGCGGTCCAAAGAAGCCGACGCA AAGACCGACAGCCCCTTGGCCGACGAGACCGGCCCCGATGGCGACGCCGTCTCTCCCGACGCCCAGACCGGCGTC CAGAAGGCAGAGGCCATGACCAAGGCGTGGACGACAAGATCGCTGATTGTGGCATACATCTTGTGCGAATCGTCG ACATTCCTCTCAGGTAGAAAACTGACCGTCTTTCAGAATCTGGCTCATCTACTTTGTCGACTCGCTGCAGCAGGG CGTCACCACGGCTCTTCATCCCTTCATCACCAGCGCCTTCCAACAACATTCGCTCACGGCGGCGACGGGAATCAT GTCCAATCTCATGGGCGGCCTGTTGAAGCTGCCGCTGGCAAAGATTCTCGACATCTGGGGCCGCCCTCAGGGTTT CGCCCTCACCACGGTGCTGCTGACGCTCGGCCTCGTCATGATGGCAGCATGCAACACGGTCGAGACCTACGCCGC TGCCCAAGTCTTTTACTGGGTCGGGTGAGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGT CATCTCCTCAACAGCCAACGACGAAACGACTGACTTTTGCATGGCAGTTTTAACGGAATGGGCTACAGCCTCTCC GTCTTCATCGCCGACACGTCGGCGCTCGAGAACCGCGGCCTCATGTTGGCTTTCCTCTACTCGCCCTTCATCATC ACCGCCTGGACCGGCGGCCCCATCGCGACCAGTGTTATGCCCGGCATCGGCTGGCGCTGGTTCTTTGGCATCTTC GCCATCATCACCCTCGCCGTCTCCCTGCCCCTAATCGCCCTCTTCGCCTACAACCTCGTCAAGGCCAAGAGATTG GGCCTGATGCCCGCTCGCGACGGGCCCCGACGCGGCCTGCTACAGGCCACGCGCCATTTCCTGATCGAGTTCGAT GTCATCGGCCTGCTGCTCATCACTGGCGGTCTCGCCCTCTTTCTGCTGCCCTTTAGCATCTATACGTATCAGCCA GCCAGGTGGCGATCTCCCCTAATCATCTGCATGCTCGTCTTCGGCGTCTTGCTGCTCGTCTGCTTCGCTCTGTAC GAGAAGCTCGTTGCGCCCGTCCAATTCCTCCCGTACCGGCTGCTGGTAGACCGCACCATCCTCGGCGCCATGGTG TCGGCCACGATGACATTCATCGCCTTTTTCCTCTGGGATAGTTACCTGCTATCGCTTCTGCAGGTTGTGAACGAC TTGTCGCTGACGGACGCGACGTACATCATCAAGATCTTCACCGTCGGCAGCTGTTTCTCCGGTCTCATCGTCGGC CTCCTGATCCGATGGTCGGGCCGTTTCAAGTGGCTGGCTCTCTACTTTGGCCTGCCGCTCACCATCCTAGGCGTC GGCCTCATGATGCACTTCGGCCAGCCTCACAGCCCCATCGGCTACGTCATCATGTGCCAGATCTTCATCGCCCTG GCCGGGGGAGCCATCACCATCTGCGAGCAAACAGCCGTCTTGGCCGTCATCTCCCACCAGCACGCCGCCGTCGTC CTGGCCGTCCTATCCATGTGCTCGTCAGTCGGGGGCGCCATCGGCAGCACGCTATCAGCCGCCATCTGGACCACC GTCCTTCCCCGCAAGCTGGAAGAGCTGCTCCCGGCCGAGGCCCAGTCCAACCGGACGACCATCTACAACGACCTG GTAGCTCAGCTATCGTACCCCAGGGGATCACCCGTGCGCGAGGCCATCAGCGAGGCCTACAGCGAGACGCAGAAG ATCATGATCATCTCCGCCATCGTCGCCTTGTTCGTGGCGCTGGCGGCCGTCTTTGCCTGGCGGGACGTTCGCGTC AAGGACTCCAAGCAGACCAAGGGGACGGTCGTATAG |