Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03070
Gene name
Locationscaffold_03:577657..579142
Strand+
Gene length (bp)1485
Transcript length (bp)1374
Coding sequence length (bp)1374
Protein length (aa) 458

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02096 60KD_IMP 60Kd inner membrane protein 2.4E-10 178 372

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0032977 membrane insertase activity Yes
GO:0005575 cellular_component No
GO:0140597 protein carrier chaperone No
GO:0031224 intrinsic component of membrane No
GO:0003674 molecular_function No
GO:0140104 molecular carrier activity No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 172 194 22
2 249 271 22
3 301 320 19
4 333 355 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03070
MLPSRGAPIVFSGAKSRIPAVHSFVFAGTGRRFGTLRQGGPSPWSSRRRRLVVGASGPSATRQLSLWGWSPSLPG
WPSSVPGWAWITGSDKSKAAPEAELIPPVQTVAVETTANPLEAIPSTEIDTSLLSEALTAEDILSLPVEPGYLGA
LGLDYGWGPTSVMQWTMEHVHVYTGLGWSATIVATAVLLRFIMLYPQYRSLKFGVAMQRMKADPRAEAALKLGRE
GAADRNLEKQMQSRMLYKMLRKEYGFSSWGMMWSIGQVPFGYGLFRLLNGMAGIPVPSFESAGWLWFPDLAAKDP
YFVLPVVGTTLMILSVTLTAKYNPAANSKFMKPMAFAIGAVGLVITSFLSSAVNLMTSTLAICTVATTLLFNTPP
SAASSSSPSTNPLPQPQPPLPNSMGDAKKGISEQISNMTGSQSISPEIQAARRRRDLLLKAEASRKQARRADFDR
KYNRAAR*
Coding >Ophcf2|03070
ATGCTTCCCAGCCGGGGAGCCCCCATCGTCTTCTCCGGAGCGAAGAGCCGGATACCCGCCGTACACAGCTTCGTC
TTCGCTGGGACGGGCCGTCGCTTCGGCACGTTGCGACAAGGAGGACCCTCGCCATGGTCTTCGCGAAGGCGTCGT
CTCGTTGTCGGTGCTTCCGGTCCGTCGGCTACGCGACAGCTTTCTCTTTGGGGATGGTCGCCTTCTCTTCCTGGG
TGGCCTTCTTCCGTCCCCGGGTGGGCGTGGATCACGGGCAGCGATAAGAGCAAGGCGGCTCCAGAAGCAGAACTC
ATACCACCCGTCCAGACGGTGGCCGTCGAAACCACCGCGAACCCCCTAGAGGCCATACCGAGCACAGAAATCGAC
ACCAGCCTCCTCTCCGAAGCCCTCACAGCCGAAGATATCCTCAGCCTCCCCGTCGAACCGGGCTACCTCGGAGCC
CTAGGTCTCGACTACGGCTGGGGCCCGACCTCGGTGATGCAATGGACCATGGAGCACGTCCACGTATACACGGGT
CTGGGATGGTCCGCCACCATCGTGGCAACAGCCGTCCTCCTCCGCTTCATAATGCTCTACCCGCAGTACCGATCT
CTCAAGTTCGGCGTCGCCATGCAGCGCATGAAGGCCGACCCGCGCGCCGAGGCGGCCCTCAAGCTGGGAAGGGAG
GGCGCGGCGGATCGCAACTTGGAGAAGCAGATGCAGAGCCGCATGCTGTACAAGATGTTGAGGAAGGAGTATGGC
TTCAGTAGCTGGGGGATGATGTGGTCCATTGGCCAGGTTCCCTTTGGCTATGGCCTGTTTCGCCTCCTCAATGGC
ATGGCTGGCATCCCCGTTCCGTCCTTCGAGTCGGCAGGTTGGCTCTGGTTTCCCGATCTGGCCGCCAAAGACCCC
TACTTCGTCCTCCCCGTCGTCGGCACCACCCTCATGATCTTATCCGTCACCCTCACCGCAAAATACAACCCGGCC
GCAAACTCAAAGTTCATGAAGCCCATGGCCTTCGCAATCGGCGCCGTCGGCCTCGTCATAACCTCATTCCTCTCC
AGCGCCGTCAACCTCATGACCTCAACCCTCGCAATCTGCACCGTCGCTACCACCCTCCTCTTCAACACCCCTCCA
TCCGCCGCCTCCTCAAGCTCCCCATCCACCAACCCGCTCCCCCAACCCCAACCACCACTCCCAAACTCCATGGGC
GACGCCAAGAAGGGCATTTCCGAGCAAATCTCCAACATGACGGGCTCCCAGTCCATCTCTCCGGAGATCCAGGCG
GCTCGTCGCCGTCGCGACTTGCTCCTCAAGGCCGAGGCCTCGCGCAAACAGGCCCGCAGAGCCGACTTCGACCGC
AAGTACAACCGTGCGGCGAGGTAG
Transcript >Ophcf2|03070
ATGCTTCCCAGCCGGGGAGCCCCCATCGTCTTCTCCGGAGCGAAGAGCCGGATACCCGCCGTACACAGCTTCGTC
TTCGCTGGGACGGGCCGTCGCTTCGGCACGTTGCGACAAGGAGGACCCTCGCCATGGTCTTCGCGAAGGCGTCGT
CTCGTTGTCGGTGCTTCCGGTCCGTCGGCTACGCGACAGCTTTCTCTTTGGGGATGGTCGCCTTCTCTTCCTGGG
TGGCCTTCTTCCGTCCCCGGGTGGGCGTGGATCACGGGCAGCGATAAGAGCAAGGCGGCTCCAGAAGCAGAACTC
ATACCACCCGTCCAGACGGTGGCCGTCGAAACCACCGCGAACCCCCTAGAGGCCATACCGAGCACAGAAATCGAC
ACCAGCCTCCTCTCCGAAGCCCTCACAGCCGAAGATATCCTCAGCCTCCCCGTCGAACCGGGCTACCTCGGAGCC
CTAGGTCTCGACTACGGCTGGGGCCCGACCTCGGTGATGCAATGGACCATGGAGCACGTCCACGTATACACGGGT
CTGGGATGGTCCGCCACCATCGTGGCAACAGCCGTCCTCCTCCGCTTCATAATGCTCTACCCGCAGTACCGATCT
CTCAAGTTCGGCGTCGCCATGCAGCGCATGAAGGCCGACCCGCGCGCCGAGGCGGCCCTCAAGCTGGGAAGGGAG
GGCGCGGCGGATCGCAACTTGGAGAAGCAGATGCAGAGCCGCATGCTGTACAAGATGTTGAGGAAGGAGTATGGC
TTCAGTAGCTGGGGGATGATGTGGTCCATTGGCCAGGTTCCCTTTGGCTATGGCCTGTTTCGCCTCCTCAATGGC
ATGGCTGGCATCCCCGTTCCGTCCTTCGAGTCGGCAGGTTGGCTCTGGTTTCCCGATCTGGCCGCCAAAGACCCC
TACTTCGTCCTCCCCGTCGTCGGCACCACCCTCATGATCTTATCCGTCACCCTCACCGCAAAATACAACCCGGCC
GCAAACTCAAAGTTCATGAAGCCCATGGCCTTCGCAATCGGCGCCGTCGGCCTCGTCATAACCTCATTCCTCTCC
AGCGCCGTCAACCTCATGACCTCAACCCTCGCAATCTGCACCGTCGCTACCACCCTCCTCTTCAACACCCCTCCA
TCCGCCGCCTCCTCAAGCTCCCCATCCACCAACCCGCTCCCCCAACCCCAACCACCACTCCCAAACTCCATGGGC
GACGCCAAGAAGGGCATTTCCGAGCAAATCTCCAACATGACGGGCTCCCAGTCCATCTCTCCGGAGATCCAGGCG
GCTCGTCGCCGTCGCGACTTGCTCCTCAAGGCCGAGGCCTCGCGCAAACAGGCCCGCAGAGCCGACTTCGACCGC
AAGTACAACCGTGCGGCGAGGTAG
Gene >Ophcf2|03070
ATGCTTCCCAGCCGGGGAGCCCCCATCGTCTTCTCCGGAGCGAAGAGCCGGATACCCGCCGTACACAGCTTCGTC
TTCGCTGGGACGGGCCGTCGCTTCGGCACGTTGCGACAAGGAGGACCCTCGCCATGGTCTTCGCGAAGGCGTCGT
CTCGTTGTCGGTGCTTCCGGTCCGTCGGCTACGCGACAGCTTTCTCTTTGGGGATGGTCGCCTTCTCTTCCTGGG
TGGCCTTCTTCCGTCCCCGGGTGGGCGTGGATCACGGGCAGCGATAAGAGCAAGGCGGCTCCAGAAGCAGAACTC
ATACCACCCGTCCAGACGGTGGCCGTCGAAACCACCGCGAACCCCCTAGAGGCCATACCGAGCACAGAAATCGAC
ACCAGCCTCCTCTCCGAAGCCCTCACAGCCGAAGATATCCTCAGCCTCCCCGTCGAACCGGGCTACCTCGGAGCC
CTAGGTCTCGACTACGGCTGGGGCCCGACCTCGGTGATGCAATGGACCATGGAGCACGTCCACGTATACACGGGT
CTGGGATGGTCCGCCACCATCGTGGCAACAGCCGTCCTCCTCCGCTTCATAATGCTCTACCCGCAGTACCGATCT
CTCAAGTTCGGCGTCGCCATGCAGCGCATGAAGGCCGACCCGCGCGCCGAGGCGGCCCTCAAGCTGGGAAGGGAG
GGCGCGGCGGATCGCAACTTGGAGAAGCAGATGCAGAGCCGCATGCTGTACAAGATGTTGAGGAAGGAGTATGGC
TTCAGTAGCTGGGGGATGATGTGGTCCATTGGCCAGGTTCCCTTTGGCTATGGCCTGTTTCGCCTCCTCAATGGC
ATGGCTGGCATCCCCGTTCCGTCCTTCGAGTCGGCAGGTTGGCTCTGGTTTCCCGATCTGGCCGCCAAAGACCCC
TACTTCGTCCTCCCCGTCGTCGGCACCACCCTCATGATCTTATCCGTCACCGTACGAAATCCCCCCCCGCCTCCC
CTATCCATCCGCTCCTCTTCCCCAGCTAACAACCCCATCAGCTCACCGCAAAATACAACCCGGCCGCAAACTCAA
AGTTCATGAAGCCCATGGCCTTCGCAATCGGCGCCGTCGGCCTCGTCATAACCTCATTCCTCTCCAGCGCCGTCA
ACCTCATGACCTCAACCCTCGCAATCTGCACCGTCGCTACCACCCTCCTCTTCAACACCCCTCCATCCGCCGCCT
CCTCAAGCTCCCCATCCACCAACCCGCTCCCCCAACCCCAACCACCACTCCCAAACTCGTCTACGAGGCCCCCGC
CCACCCCTCAGCCAACGCATCGCCCAAAGCATGGGCGACGCCAAGAAGGGCATTTCCGAGCAAATCTCCAACATG
ACGGGCTCCCAGTCCATCTCTCCGGAGATCCAGGCGGCTCGTCGCCGTCGCGACTTGCTCCTCAAGGCCGAGGCC
TCGCGCAAACAGGCCCGCAGAGCCGACTTCGACCGCAAGTACAACCGTGCGGCGAGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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