Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03055
Gene name
Locationscaffold_03:545241..547563
Strand+
Gene length (bp)2322
Transcript length (bp)1359
Coding sequence length (bp)1359
Protein length (aa) 453

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00730 HhH-GPD HhH-GPD superfamily base excision DNA repair protein 4.0E-08 207 351

GO

GO Term Description Terminal node
GO:0006284 base-excision repair Yes
GO:0044237 cellular metabolic process No
GO:0071704 organic substance metabolic process No
GO:0009987 cellular process No
GO:0008152 metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0051716 cellular response to stimulus No
GO:0044260 cellular macromolecule metabolic process No
GO:0006259 DNA metabolic process No
GO:0043170 macromolecule metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0050896 response to stimulus No
GO:0006725 cellular aromatic compound metabolic process No
GO:0044238 primary metabolic process No
GO:0033554 cellular response to stress No
GO:0006807 nitrogen compound metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0006974 cellular response to DNA damage stimulus No
GO:0006950 response to stress No
GO:0006281 DNA repair No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.1791 0.942 0.1221 0.0398 0.1698 0.0285 0.0244 0.0113 0.022 0.0089

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup2454
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|540
Ophiocordyceps australis map64 (Brazil) OphauB2|6235
Ophiocordyceps camponoti-floridani Ophcf2|03055 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|5080
Ophiocordyceps kimflemingae Ophio5|6481
Ophiocordyceps subramaniannii Hirsu2|3525

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03055
MAASAAGKTPVRRSGRNVKRVDLEMGSSSSSEARILPKKRRIKKEQEKQQLPSPNIKTESSSEAITSPKKRRIKK
QESQHLSSTSTPYPESPSKASATSNKRRIKEEESHQPSSPSKEATTPSKRQANVKDSPEKAALLRDRKLKTFAAH
AQNSPFPDWPRPTDADCQLAHAILARLHGDRVQPARVVAPTDTAGCGASPSVLDALVRTILSQNTSDVNSSRAKR
NMDVIYGGSDKWDAIVEGGQEKLQQAIRSGGLSVVKSRVIIRVLEQVKSRHGSYTLDHLFHASDEDAMREMLSFQ
GVGPKTASCVLLFCLRRASFAVDTHVYRLAGLLGWRPARASREETQAHLDARIPDGENRAGNPPPSINPRPEDGK
HQNNRLLNPSVKLVEINLEVPLRVFGAHPPAPRLHRPPVRVLQVDELPPQASARVLEALQRAGSCRGCRRVLPRG
RW*
Coding >Ophcf2|03055
ATGGCTGCGTCTGCTGCTGGGAAGACGCCGGTGAGGCGCAGCGGCCGGAATGTGAAGAGAGTTGACTTGGAGATG
GGATCGTCGTCGTCGTCAGAAGCACGCATTTTACCAAAGAAGCGAAGAATCAAGAAGGAACAAGAGAAGCAACAG
CTTCCGTCACCGAACATCAAGACAGAATCATCATCTGAAGCAATCACCTCGCCCAAGAAGCGAAGAATCAAGAAA
CAAGAATCGCAGCACCTCTCATCAACATCAACCCCCTATCCAGAATCCCCATCCAAAGCATCCGCCACATCCAAC
AAACGCAGAATCAAAGAGGAAGAATCGCATCAACCCTCATCACCCTCCAAAGAAGCAACCACCCCCTCGAAACGC
CAAGCCAACGTCAAAGACTCGCCCGAAAAAGCCGCCCTCCTCCGAGACCGCAAACTAAAGACCTTTGCCGCTCAC
GCCCAAAACTCCCCCTTTCCAGATTGGCCCCGTCCCACTGATGCCGACTGTCAGCTTGCGCACGCCATCCTCGCT
CGTCTGCATGGAGACCGCGTCCAGCCTGCGCGCGTCGTGGCCCCGACCGATACGGCCGGCTGCGGAGCTTCCCCT
TCTGTGCTTGACGCGCTGGTGCGCACCATCCTCTCGCAGAACACCAGTGACGTCAACAGTTCGCGCGCGAAGAGG
AATATGGATGTCATCTACGGGGGGTCGGACAAGTGGGATGCCATCGTCGAGGGGGGACAGGAAAAGTTACAGCAG
GCTATCCGCTCAGGCGGCCTCAGCGTCGTCAAGTCGCGCGTCATAATCCGCGTCCTGGAGCAAGTCAAGTCCCGC
CACGGCAGCTACACACTCGACCACCTCTTCCACGCAAGCGACGAGGACGCCATGCGCGAGATGCTCTCCTTCCAA
GGCGTTGGGCCCAAGACGGCCAGCTGCGTACTCCTCTTCTGCCTGCGGCGCGCGAGCTTCGCCGTCGACACCCAT
GTCTATCGGCTGGCGGGGCTGTTGGGATGGAGGCCGGCTAGGGCGTCGAGGGAGGAGACGCAGGCGCATCTTGAT
GCGAGGATCCCGGATGGGGAGAATCGAGCCGGAAACCCCCCTCCTAGCATCAACCCCCGTCCCGAAGACGGAAAG
CACCAAAACAACCGCCTGCTCAATCCAAGCGTAAAACTCGTAGAAATCAACCTTGAAGTTCCTCTCCGCGTCTTC
GGCGCCCATCCCCCAGCTCCCCGGCTCCATCGCCCGCCGGTACGCGTTCTGCAGGTCGATGAACTTCCACCGCAG
GCGTCGGCACGCGTGCTCGAAGCGTTGCAGCGCGCGGGCTCGTGCCGTGGCTGTCGTCGAGTCTTGCCGCGTGGG
AGATGGTGA
Transcript >Ophcf2|03055
ATGGCTGCGTCTGCTGCTGGGAAGACGCCGGTGAGGCGCAGCGGCCGGAATGTGAAGAGAGTTGACTTGGAGATG
GGATCGTCGTCGTCGTCAGAAGCACGCATTTTACCAAAGAAGCGAAGAATCAAGAAGGAACAAGAGAAGCAACAG
CTTCCGTCACCGAACATCAAGACAGAATCATCATCTGAAGCAATCACCTCGCCCAAGAAGCGAAGAATCAAGAAA
CAAGAATCGCAGCACCTCTCATCAACATCAACCCCCTATCCAGAATCCCCATCCAAAGCATCCGCCACATCCAAC
AAACGCAGAATCAAAGAGGAAGAATCGCATCAACCCTCATCACCCTCCAAAGAAGCAACCACCCCCTCGAAACGC
CAAGCCAACGTCAAAGACTCGCCCGAAAAAGCCGCCCTCCTCCGAGACCGCAAACTAAAGACCTTTGCCGCTCAC
GCCCAAAACTCCCCCTTTCCAGATTGGCCCCGTCCCACTGATGCCGACTGTCAGCTTGCGCACGCCATCCTCGCT
CGTCTGCATGGAGACCGCGTCCAGCCTGCGCGCGTCGTGGCCCCGACCGATACGGCCGGCTGCGGAGCTTCCCCT
TCTGTGCTTGACGCGCTGGTGCGCACCATCCTCTCGCAGAACACCAGTGACGTCAACAGTTCGCGCGCGAAGAGG
AATATGGATGTCATCTACGGGGGGTCGGACAAGTGGGATGCCATCGTCGAGGGGGGACAGGAAAAGTTACAGCAG
GCTATCCGCTCAGGCGGCCTCAGCGTCGTCAAGTCGCGCGTCATAATCCGCGTCCTGGAGCAAGTCAAGTCCCGC
CACGGCAGCTACACACTCGACCACCTCTTCCACGCAAGCGACGAGGACGCCATGCGCGAGATGCTCTCCTTCCAA
GGCGTTGGGCCCAAGACGGCCAGCTGCGTACTCCTCTTCTGCCTGCGGCGCGCGAGCTTCGCCGTCGACACCCAT
GTCTATCGGCTGGCGGGGCTGTTGGGATGGAGGCCGGCTAGGGCGTCGAGGGAGGAGACGCAGGCGCATCTTGAT
GCGAGGATCCCGGATGGGGAGAATCGAGCCGGAAACCCCCCTCCTAGCATCAACCCCCGTCCCGAAGACGGAAAG
CACCAAAACAACCGCCTGCTCAATCCAAGCGTAAAACTCGTAGAAATCAACCTTGAAGTTCCTCTCCGCGTCTTC
GGCGCCCATCCCCCAGCTCCCCGGCTCCATCGCCCGCCGGTACGCGTTCTGCAGGTCGATGAACTTCCACCGCAG
GCGTCGGCACGCGTGCTCGAAGCGTTGCAGCGCGCGGGCTCGTGCCGTGGCTGTCGTCGAGTCTTGCCGCGTGGG
AGATGGTGA
Gene >Ophcf2|03055
ATGGCTGCGTCTGCTGCTGGGAAGACGCCGGTGAGGCGCAGCGGCCGGAATGTGAAGAGAGTTGACTTGGAGATG
GGATCGTCGTCGTCGTCAGAAGCACGCATTTTACCAAAGAAGCGAAGAATCAAGAAGGAACAAGAGAAGCAACAG
CTTCCGTCACCGAACATCAAGACAGAATCATCATCTGAAGCAATCACCTCGCCCAAGAAGCGAAGAATCAAGAAA
CAAGAATCGCAGCACCTCTCATCAACATCAACCCCCTATCCAGAATCCCCATCCAAAGCATCCGCCACATCCAAC
AAACGCAGAATCAAAGAGGAAGAATCGCATCAACCCTCATCACCCTCCAAAGAAGCAACCACCCCCTCGAAACGC
CAAGCCAACGTCAAAGACTCGCCCGAAAAAGCCGCCCTCCTCCGAGACCGCAAACTAAAGACCTTTGCCGCTCAC
GCCCAAAACTCCCCCTTTCCAGATTGGCCCCGTCCCACTGATGCCGACTGTCAGCTTGCGCACGCCATCCTCGCT
CGTCTGCATGGAGACCGCGTCCAGCCTGCGCGCGTCGTGGCCCCGACCGATACGGCCGGCTGCGGAGCTTCCCCT
TCTGTGCTTGACGCGCTGGTGCGCACCATCCTCTCGCAGAACACCAGTGACGTCAACAGTTCGCGCGCGAAGAGG
AATATGGATGTCATCTACGGGGGGTCGGACAAGTGGGATGCCATCGTCGAGGGGGGACAGGAAAAGTTACAGCAG
GCTATCCGCTCAGGCGGCCTCAGCGTCGTCAAGTCGCGCGTCATAATCCGCGTCCTGGAGCAAGTCAAGTCCCGC
CACGGCAGCTACACACTCGACCACCTCTTCCACGCAAGCGACGAGGACGCCATGCGCGAGATGCTCTCCTTCCAA
GGCGTTGGGCCCAAGACGGCCAGCTGCGTACTCCTCTTCTGCCTGCGGCGCGCGAGCTTCGCCGTCGACACCCAT
GTCTATCGGCTGGCGGGGCTGTTGGGATGGAGGCCGGCTAGGGCGTCGAGGGAGGAGACGCAGGCGCATCTTGAT
GCGAGGATCCCGGATGGGGAGAAGTATGCTTTGCACGTCTTGCTGATTGTTCATGGGAAGAGGTGTGGGGAGTGT
CGGGCTGGGGGGAAGAGGGTCGGTTGTGAGTTGAGGAGGGCTTTGGGGGGAAGGGGGTGGCGTGGAGATGGAGGG
GTGGTGAAGGAAGAAGAGATGGAGGGGTGGTGAAGGAAGAAGAGGAGGACGAGGAGGTGGAGAAGTTGGTGAAGG
AGGAGGAGGAGGAGGAGAAGGAGATGGATGACGAGTTGGCGGAAGAGAAGGTGGTGGAGGAGGGGGTAGAGGAGG
AGGGGGTCAAGGAGGTGGTCAATGCAAAGGTCAAGGACAAGGTCAAGAAGGAGGATGCTGAGAAAGAGGCGGGAA
GGAGATTGAGGGGAAGGTAGATAAACGGTAAAGGGGTAACCCAGGCAAACAGTTGCAGAACAGGTGAAGAGTTGA
AGACGTAGACCAGGTAGAACAGATAGAACAAGTAAAGAAAAAAGAAACCATCTCTCGCGAACGAGCAATGTTCAA
ATCTGTATTCGTAAACTATATAACTATATATAAAGAAGCCCTCGCTCAGACCAGTATTCAAACGTATAAACACCT
CACCATCTACAACAGAAGCAACTCCCTCCCACATCAACCACCCTCACCAACCCCCCCCCCAAATCCCCCCCTAAG
CCTGCCAATCCATCATCTCAACCATCCAAAACTCATCCCTGCCCACCCCCCCCCCTCCCCCACGACCCCCCTCGC
AACCCCATACGCAGCCTCCAACCCCCCCATGGTCTGGCCAACAATCCAATCAAGATCATACATCCTCAAAGGCGG
CGTCTCCCTGCCCTCGAAAGCAGCATCCTTCCAGCGATTCCGCAACTCCTTGGCCTTCCAAAGCGCGGCATTCAC
ATCCCCCCTCCCCAGAAGCTCATGCAAGGGATGCGACGCATCCGCCAGCGCGCCCAGGACATTATGATGATACGA
ATGGGAGTTAGTCGAGCCGGAAACCCCCCTCCTAGCATCAACCCCCGTCCCGAAGACGGAAAGCACCAAAACAAC
CGCCTGCTCAATCCAAGCGTAAAACTCGTAGAAATCAACCTTGAAGTTCCTCTCCGCGTCTTCGGCGCCCATCCC
CCAGCTCCCCGGCTCCATCGCCCGCCGGTACGCGTTCTGCAGGTCGATGAACTTCCACCGCAGGCGTCGGCACGC
GTGCTCGAAGCGTTGCAGCGCGCGGGCTCGTGCCGTGGCTGTCGTCGAGTCTTGCCGCGTGGGAGATGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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