Protein ID | Ophcf2|03046 |
Gene name | |
Location | scaffold_03:527027..528819 |
Strand | + |
Gene length (bp) | 1792 |
Transcript length (bp) | 1590 |
Coding sequence length (bp) | 1590 |
Protein length (aa) | 530 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 59 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 144 | 163 | 19 |
2 | 419 | 441 | 22 |
3 | 456 | 478 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 0.70 | 0.00 | 1.40 |
Alive | In ants, during behavior modification | 3.95 | 0.79 | 7.11 |
Dead | In ants, recently dead | 2.14 | 0.33 | 3.94 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.000238 | yes |
Alive | Dead | 0.049563 | yes |
Dead | Fungus | 0.009164 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03046 MAGSVSFPPELGSRRPVDDFMPSLHRDEPPNHATTQSSASSLIGKFLAAGLSGNHTDGHHYNARGNPSSPFNLFG YRSYSPPRLDIYELESMVGCSHLPYNDDRDFDSCCPASIFGSEVERKARNPEARSSSDFQLRPAGHRWWFLVRFF LFLLYCIGLRIFYPNLSRSVSARQEGRIYESEAKGARNASMAITWTETIITSGVCLMVAQGFHGECLALLAAYPV VLLHELRLDDCEPDVTGYCREVAKRLSALRNGSDDGRSKTCTTGTTEFTSTSDGSRATYYPSNSSRSRVTYHPSE MSSNPCDIRQFKFRQVDYFFEVFALQLHSEYKRQKMRVNRPSTMANHIACNLNSHIDNFAQHGGACERLAIMRES HGRRRSLTDTDVAVSGLTGSSSGEIMDRLCQAGQTARTFAKGDVCPVVFLNSIFALGWVVALGIPWQRSGSFVNP EGDDSLLPTWYSCFMMMVMSTLSAILTSLLLEMRSMWDPYGKAMNEMAWIIGNASALDYLLHDYYDEGESIIRPH EFYY* |
Coding | >Ophcf2|03046 ATGGCAGGCTCCGTCAGCTTCCCCCCCGAACTCGGCTCCAGGCGTCCCGTCGACGACTTCATGCCGTCGCTTCAC CGGGACGAGCCGCCAAACCACGCAACCACCCAGTCTTCAGCCTCCAGCCTGATAGGGAAATTCCTCGCCGCCGGC CTCTCCGGGAACCACACGGACGGCCATCACTACAACGCTCGTGGAAACCCGTCTTCGCCCTTCAACCTCTTCGGT TACCGCTCGTACTCTCCGCCACGCCTGGACATTTACGAGTTGGAATCCATGGTCGGCTGCTCCCATCTTCCCTAC AACGACGATAGAGACTTTGATTCCTGCTGTCCTGCCAGCATCTTTGGCTCCGAAGTGGAACGAAAGGCTCGCAAT CCCGAAGCCCGTAGCTCCTCAGACTTCCAACTACGTCCTGCAGGCCATCGTTGGTGGTTCCTCGTCCGATTCTTT CTCTTTCTTCTCTACTGTATCGGGCTTCGCATCTTCTACCCCAACCTCAGCCGCTCTGTTTCCGCGCGTCAAGAG GGCAGAATCTACGAGTCGGAGGCAAAAGGTGCTCGCAACGCTTCAATGGCCATCACCTGGACCGAAACAATCATA ACCTCAGGCGTATGTCTGATGGTGGCACAGGGGTTTCATGGCGAGTGTCTGGCACTTCTCGCCGCCTACCCCGTC GTGCTGCTCCACGAGCTGCGACTGGACGACTGCGAGCCAGACGTCACTGGCTACTGTCGAGAAGTGGCCAAGAGG CTGTCAGCCCTCCGGAACGGCTCTGACGATGGCCGTTCAAAGACCTGCACCACCGGAACCACCGAATTCACCAGC ACCAGCGACGGGAGCCGCGCCACTTATTACCCGTCCAACAGCAGCAGAAGTCGCGTCACCTATCACCCGTCCGAG ATGAGCTCCAATCCGTGTGACATTCGCCAGTTCAAGTTTAGGCAGGTAGATTACTTTTTCGAGGTTTTCGCCCTT CAGCTACACAGCGAATACAAGCGGCAAAAGATGCGAGTAAACCGACCTTCGACCATGGCCAATCACATCGCCTGC AACTTGAACTCCCACATTGACAACTTTGCGCAACACGGCGGCGCCTGTGAGAGGTTGGCCATTATGCGTGAGTCT CATGGGCGACGTCGGTCCCTCACCGATACCGATGTCGCCGTGTCCGGGCTGACGGGAAGCTCCTCAGGAGAGATC ATGGACCGCCTGTGTCAAGCAGGACAAACGGCCAGGACCTTTGCTAAAGGAGACGTCTGCCCCGTCGTCTTCCTC AATTCCATCTTCGCCCTGGGCTGGGTGGTGGCGCTGGGCATCCCCTGGCAGAGGAGCGGCTCCTTTGTCAATCCC GAGGGCGACGACTCGCTGCTGCCGACGTGGTACAGTTGCTTCATGATGATGGTCATGTCGACGCTGAGCGCCATC TTGACGTCACTGCTCCTGGAAATGAGGAGCATGTGGGATCCCTATGGCAAGGCCATGAACGAGATGGCGTGGATC ATTGGCAATGCCTCGGCCCTCGACTATCTTCTTCACGACTACTACGATGAAGGGGAGAGCATTATTCGTCCTCAT GAGTTTTATTACTAG |
Transcript | >Ophcf2|03046 ATGGCAGGCTCCGTCAGCTTCCCCCCCGAACTCGGCTCCAGGCGTCCCGTCGACGACTTCATGCCGTCGCTTCAC CGGGACGAGCCGCCAAACCACGCAACCACCCAGTCTTCAGCCTCCAGCCTGATAGGGAAATTCCTCGCCGCCGGC CTCTCCGGGAACCACACGGACGGCCATCACTACAACGCTCGTGGAAACCCGTCTTCGCCCTTCAACCTCTTCGGT TACCGCTCGTACTCTCCGCCACGCCTGGACATTTACGAGTTGGAATCCATGGTCGGCTGCTCCCATCTTCCCTAC AACGACGATAGAGACTTTGATTCCTGCTGTCCTGCCAGCATCTTTGGCTCCGAAGTGGAACGAAAGGCTCGCAAT CCCGAAGCCCGTAGCTCCTCAGACTTCCAACTACGTCCTGCAGGCCATCGTTGGTGGTTCCTCGTCCGATTCTTT CTCTTTCTTCTCTACTGTATCGGGCTTCGCATCTTCTACCCCAACCTCAGCCGCTCTGTTTCCGCGCGTCAAGAG GGCAGAATCTACGAGTCGGAGGCAAAAGGTGCTCGCAACGCTTCAATGGCCATCACCTGGACCGAAACAATCATA ACCTCAGGCGTATGTCTGATGGTGGCACAGGGGTTTCATGGCGAGTGTCTGGCACTTCTCGCCGCCTACCCCGTC GTGCTGCTCCACGAGCTGCGACTGGACGACTGCGAGCCAGACGTCACTGGCTACTGTCGAGAAGTGGCCAAGAGG CTGTCAGCCCTCCGGAACGGCTCTGACGATGGCCGTTCAAAGACCTGCACCACCGGAACCACCGAATTCACCAGC ACCAGCGACGGGAGCCGCGCCACTTATTACCCGTCCAACAGCAGCAGAAGTCGCGTCACCTATCACCCGTCCGAG ATGAGCTCCAATCCGTGTGACATTCGCCAGTTCAAGTTTAGGCAGGTAGATTACTTTTTCGAGGTTTTCGCCCTT CAGCTACACAGCGAATACAAGCGGCAAAAGATGCGAGTAAACCGACCTTCGACCATGGCCAATCACATCGCCTGC AACTTGAACTCCCACATTGACAACTTTGCGCAACACGGCGGCGCCTGTGAGAGGTTGGCCATTATGCGTGAGTCT CATGGGCGACGTCGGTCCCTCACCGATACCGATGTCGCCGTGTCCGGGCTGACGGGAAGCTCCTCAGGAGAGATC ATGGACCGCCTGTGTCAAGCAGGACAAACGGCCAGGACCTTTGCTAAAGGAGACGTCTGCCCCGTCGTCTTCCTC AATTCCATCTTCGCCCTGGGCTGGGTGGTGGCGCTGGGCATCCCCTGGCAGAGGAGCGGCTCCTTTGTCAATCCC GAGGGCGACGACTCGCTGCTGCCGACGTGGTACAGTTGCTTCATGATGATGGTCATGTCGACGCTGAGCGCCATC TTGACGTCACTGCTCCTGGAAATGAGGAGCATGTGGGATCCCTATGGCAAGGCCATGAACGAGATGGCGTGGATC ATTGGCAATGCCTCGGCCCTCGACTATCTTCTTCACGACTACTACGATGAAGGGGAGAGCATTATTCGTCCTCAT GAGTTTTATTACTAG |
Gene | >Ophcf2|03046 ATGGCAGGCTCCGTCAGCTTCCCCCCCGAACTCGGCTCCAGGCGTCCCGTCGACGACTTCATGCCGTCGCTTCAC CGGGACGAGCCGCCAAACCACGCAACCACCCAGTCTTCAGCCTCCAGCCTGATAGGGAAATTCCTCGCCGCCGGC CTCTCCGGGAACCACACGGACGGCCATCACTACAACGCTCGTGGAAACCCGTCTTCGCCCTTCAACCTCTTCGGT TACCGCTCGTACTCTCCGCCACGCCTGGACATTTACGAGTTGGAATCCATGGTCGGCTGCTCCCATCTTCCCTAC AACGACGATAGAGACTTTGATTCCTGCTGTCCTGCCAGCATCTTTGGCTCCGAAGTGGAACGAAAGGCTCGCAAT CCCGAAGCCCGTAGCTCCTCAGACTTCCAACTACGTCCTGCAGGCCATCGTTGGTGGTTCCTCGTCCGATTCTTT CTCTTTCTTCTCTACTGTATCGGGCTTCGCATCTTCTACCCCAACCTCAGCCGCTCTGTTTCCGCGCGTCAAGAG GGCAGAATCTACGAGTCGGAGGCAAAAGGTGCTCGCAACGCTTCAATGGCCATCACCTGGACCGAAACAATCATA ACCTCAGGCGTATGTCTGATGGTGGCACAGGGGTTTCATGGGTATTCGCCTTGCCGACGCCGTCATCGGCTGCTA ACGGATCCGTAGCGTACGAATCGCACGAGAGCACATGGAACGAATCAACAGCTTCACCTATATGCTGGCCTATGC ATTTCTCAAGTGCTGCGGCGGAGGCACCGACTTCATCGTCTAGCACGTCGTCCGTCTGCACCACCTCACGGCTCA ACCGCTGACGTTCCCTAGCGAGTGTCTGGCACTTCTCGCCGCCTACCCCGTCGTGCTGCTCCACGAGCTGCGACT GGACGACTGCGAGCCAGACGTCACTGGCTACTGTCGAGAAGTGGCCAAGAGGCTGTCAGCCCTCCGGAACGGCTC TGACGATGGCCGTTCAAAGACCTGCACCACCGGAACCACCGAATTCACCAGCACCAGCGACGGGAGCCGCGCCAC TTATTACCCGTCCAACAGCAGCAGAAGTCGCGTCACCTATCACCCGTCCGAGATGAGCTCCAATCCGTGTGACAT TCGCCAGTTCAAGTTTAGGCAGGTAGATTACTTTTTCGAGGTTTTCGCCCTTCAGCTACACAGCGAATACAAGCG GCAAAAGATGCGAGTAAACCGACCTTCGACCATGGCCAATCACATCGCCTGCAACTTGAACTCCCACATTGACAA CTTTGCGCAACACGGCGGCGCCTGTGAGAGGTTGGCCATTATGCGTGAGTCTCATGGGCGACGTCGGTCCCTCAC CGATACCGATGTCGCCGTGTCCGGGCTGACGGGAAGCTCCTCAGGAGAGATCATGGACCGCCTGTGTCAAGCAGG ACAAACGGCCAGGACCTTTGCTAAAGGAGACGTCTGCCCCGTCGTCTTCCTCAATTCCATCTTCGCCCTGGGCTG GGTGGTGGCGCTGGGCATCCCCTGGCAGAGGAGCGGCTCCTTTGTCAATCCCGAGGGCGACGACTCGCTGCTGCC GACGTGGTACAGTTGCTTCATGATGATGGTCATGTCGACGCTGAGCGCCATCTTGACGTCACTGCTCCTGGAAAT GAGGAGCATGTGGGATCCCTATGGCAAGGCCATGAACGAGATGGCGTGGATCATTGGCAATGCCTCGGCCCTCGA CTATCTTCTTCACGACTACTACGATGAAGGGGAGAGCATTATTCGTCCTCATGAGTTTTATTACTAG |