Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03046
Gene name
Locationscaffold_03:527027..528819
Strand+
Gene length (bp)1792
Transcript length (bp)1590
Coding sequence length (bp)1590
Protein length (aa) 530

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 59 0.45

Transmembrane Domains

Domain # Start End Length
1 144 163 19
2 419 441 22
3 456 478 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 0.70 0.00 1.40
Alive In ants, during behavior modification 3.95 0.79 7.11
Dead In ants, recently dead 2.14 0.33 3.94

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.000238 yes
Alive Dead 0.049563 yes
Dead Fungus 0.009164 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03046
MAGSVSFPPELGSRRPVDDFMPSLHRDEPPNHATTQSSASSLIGKFLAAGLSGNHTDGHHYNARGNPSSPFNLFG
YRSYSPPRLDIYELESMVGCSHLPYNDDRDFDSCCPASIFGSEVERKARNPEARSSSDFQLRPAGHRWWFLVRFF
LFLLYCIGLRIFYPNLSRSVSARQEGRIYESEAKGARNASMAITWTETIITSGVCLMVAQGFHGECLALLAAYPV
VLLHELRLDDCEPDVTGYCREVAKRLSALRNGSDDGRSKTCTTGTTEFTSTSDGSRATYYPSNSSRSRVTYHPSE
MSSNPCDIRQFKFRQVDYFFEVFALQLHSEYKRQKMRVNRPSTMANHIACNLNSHIDNFAQHGGACERLAIMRES
HGRRRSLTDTDVAVSGLTGSSSGEIMDRLCQAGQTARTFAKGDVCPVVFLNSIFALGWVVALGIPWQRSGSFVNP
EGDDSLLPTWYSCFMMMVMSTLSAILTSLLLEMRSMWDPYGKAMNEMAWIIGNASALDYLLHDYYDEGESIIRPH
EFYY*
Coding >Ophcf2|03046
ATGGCAGGCTCCGTCAGCTTCCCCCCCGAACTCGGCTCCAGGCGTCCCGTCGACGACTTCATGCCGTCGCTTCAC
CGGGACGAGCCGCCAAACCACGCAACCACCCAGTCTTCAGCCTCCAGCCTGATAGGGAAATTCCTCGCCGCCGGC
CTCTCCGGGAACCACACGGACGGCCATCACTACAACGCTCGTGGAAACCCGTCTTCGCCCTTCAACCTCTTCGGT
TACCGCTCGTACTCTCCGCCACGCCTGGACATTTACGAGTTGGAATCCATGGTCGGCTGCTCCCATCTTCCCTAC
AACGACGATAGAGACTTTGATTCCTGCTGTCCTGCCAGCATCTTTGGCTCCGAAGTGGAACGAAAGGCTCGCAAT
CCCGAAGCCCGTAGCTCCTCAGACTTCCAACTACGTCCTGCAGGCCATCGTTGGTGGTTCCTCGTCCGATTCTTT
CTCTTTCTTCTCTACTGTATCGGGCTTCGCATCTTCTACCCCAACCTCAGCCGCTCTGTTTCCGCGCGTCAAGAG
GGCAGAATCTACGAGTCGGAGGCAAAAGGTGCTCGCAACGCTTCAATGGCCATCACCTGGACCGAAACAATCATA
ACCTCAGGCGTATGTCTGATGGTGGCACAGGGGTTTCATGGCGAGTGTCTGGCACTTCTCGCCGCCTACCCCGTC
GTGCTGCTCCACGAGCTGCGACTGGACGACTGCGAGCCAGACGTCACTGGCTACTGTCGAGAAGTGGCCAAGAGG
CTGTCAGCCCTCCGGAACGGCTCTGACGATGGCCGTTCAAAGACCTGCACCACCGGAACCACCGAATTCACCAGC
ACCAGCGACGGGAGCCGCGCCACTTATTACCCGTCCAACAGCAGCAGAAGTCGCGTCACCTATCACCCGTCCGAG
ATGAGCTCCAATCCGTGTGACATTCGCCAGTTCAAGTTTAGGCAGGTAGATTACTTTTTCGAGGTTTTCGCCCTT
CAGCTACACAGCGAATACAAGCGGCAAAAGATGCGAGTAAACCGACCTTCGACCATGGCCAATCACATCGCCTGC
AACTTGAACTCCCACATTGACAACTTTGCGCAACACGGCGGCGCCTGTGAGAGGTTGGCCATTATGCGTGAGTCT
CATGGGCGACGTCGGTCCCTCACCGATACCGATGTCGCCGTGTCCGGGCTGACGGGAAGCTCCTCAGGAGAGATC
ATGGACCGCCTGTGTCAAGCAGGACAAACGGCCAGGACCTTTGCTAAAGGAGACGTCTGCCCCGTCGTCTTCCTC
AATTCCATCTTCGCCCTGGGCTGGGTGGTGGCGCTGGGCATCCCCTGGCAGAGGAGCGGCTCCTTTGTCAATCCC
GAGGGCGACGACTCGCTGCTGCCGACGTGGTACAGTTGCTTCATGATGATGGTCATGTCGACGCTGAGCGCCATC
TTGACGTCACTGCTCCTGGAAATGAGGAGCATGTGGGATCCCTATGGCAAGGCCATGAACGAGATGGCGTGGATC
ATTGGCAATGCCTCGGCCCTCGACTATCTTCTTCACGACTACTACGATGAAGGGGAGAGCATTATTCGTCCTCAT
GAGTTTTATTACTAG
Transcript >Ophcf2|03046
ATGGCAGGCTCCGTCAGCTTCCCCCCCGAACTCGGCTCCAGGCGTCCCGTCGACGACTTCATGCCGTCGCTTCAC
CGGGACGAGCCGCCAAACCACGCAACCACCCAGTCTTCAGCCTCCAGCCTGATAGGGAAATTCCTCGCCGCCGGC
CTCTCCGGGAACCACACGGACGGCCATCACTACAACGCTCGTGGAAACCCGTCTTCGCCCTTCAACCTCTTCGGT
TACCGCTCGTACTCTCCGCCACGCCTGGACATTTACGAGTTGGAATCCATGGTCGGCTGCTCCCATCTTCCCTAC
AACGACGATAGAGACTTTGATTCCTGCTGTCCTGCCAGCATCTTTGGCTCCGAAGTGGAACGAAAGGCTCGCAAT
CCCGAAGCCCGTAGCTCCTCAGACTTCCAACTACGTCCTGCAGGCCATCGTTGGTGGTTCCTCGTCCGATTCTTT
CTCTTTCTTCTCTACTGTATCGGGCTTCGCATCTTCTACCCCAACCTCAGCCGCTCTGTTTCCGCGCGTCAAGAG
GGCAGAATCTACGAGTCGGAGGCAAAAGGTGCTCGCAACGCTTCAATGGCCATCACCTGGACCGAAACAATCATA
ACCTCAGGCGTATGTCTGATGGTGGCACAGGGGTTTCATGGCGAGTGTCTGGCACTTCTCGCCGCCTACCCCGTC
GTGCTGCTCCACGAGCTGCGACTGGACGACTGCGAGCCAGACGTCACTGGCTACTGTCGAGAAGTGGCCAAGAGG
CTGTCAGCCCTCCGGAACGGCTCTGACGATGGCCGTTCAAAGACCTGCACCACCGGAACCACCGAATTCACCAGC
ACCAGCGACGGGAGCCGCGCCACTTATTACCCGTCCAACAGCAGCAGAAGTCGCGTCACCTATCACCCGTCCGAG
ATGAGCTCCAATCCGTGTGACATTCGCCAGTTCAAGTTTAGGCAGGTAGATTACTTTTTCGAGGTTTTCGCCCTT
CAGCTACACAGCGAATACAAGCGGCAAAAGATGCGAGTAAACCGACCTTCGACCATGGCCAATCACATCGCCTGC
AACTTGAACTCCCACATTGACAACTTTGCGCAACACGGCGGCGCCTGTGAGAGGTTGGCCATTATGCGTGAGTCT
CATGGGCGACGTCGGTCCCTCACCGATACCGATGTCGCCGTGTCCGGGCTGACGGGAAGCTCCTCAGGAGAGATC
ATGGACCGCCTGTGTCAAGCAGGACAAACGGCCAGGACCTTTGCTAAAGGAGACGTCTGCCCCGTCGTCTTCCTC
AATTCCATCTTCGCCCTGGGCTGGGTGGTGGCGCTGGGCATCCCCTGGCAGAGGAGCGGCTCCTTTGTCAATCCC
GAGGGCGACGACTCGCTGCTGCCGACGTGGTACAGTTGCTTCATGATGATGGTCATGTCGACGCTGAGCGCCATC
TTGACGTCACTGCTCCTGGAAATGAGGAGCATGTGGGATCCCTATGGCAAGGCCATGAACGAGATGGCGTGGATC
ATTGGCAATGCCTCGGCCCTCGACTATCTTCTTCACGACTACTACGATGAAGGGGAGAGCATTATTCGTCCTCAT
GAGTTTTATTACTAG
Gene >Ophcf2|03046
ATGGCAGGCTCCGTCAGCTTCCCCCCCGAACTCGGCTCCAGGCGTCCCGTCGACGACTTCATGCCGTCGCTTCAC
CGGGACGAGCCGCCAAACCACGCAACCACCCAGTCTTCAGCCTCCAGCCTGATAGGGAAATTCCTCGCCGCCGGC
CTCTCCGGGAACCACACGGACGGCCATCACTACAACGCTCGTGGAAACCCGTCTTCGCCCTTCAACCTCTTCGGT
TACCGCTCGTACTCTCCGCCACGCCTGGACATTTACGAGTTGGAATCCATGGTCGGCTGCTCCCATCTTCCCTAC
AACGACGATAGAGACTTTGATTCCTGCTGTCCTGCCAGCATCTTTGGCTCCGAAGTGGAACGAAAGGCTCGCAAT
CCCGAAGCCCGTAGCTCCTCAGACTTCCAACTACGTCCTGCAGGCCATCGTTGGTGGTTCCTCGTCCGATTCTTT
CTCTTTCTTCTCTACTGTATCGGGCTTCGCATCTTCTACCCCAACCTCAGCCGCTCTGTTTCCGCGCGTCAAGAG
GGCAGAATCTACGAGTCGGAGGCAAAAGGTGCTCGCAACGCTTCAATGGCCATCACCTGGACCGAAACAATCATA
ACCTCAGGCGTATGTCTGATGGTGGCACAGGGGTTTCATGGGTATTCGCCTTGCCGACGCCGTCATCGGCTGCTA
ACGGATCCGTAGCGTACGAATCGCACGAGAGCACATGGAACGAATCAACAGCTTCACCTATATGCTGGCCTATGC
ATTTCTCAAGTGCTGCGGCGGAGGCACCGACTTCATCGTCTAGCACGTCGTCCGTCTGCACCACCTCACGGCTCA
ACCGCTGACGTTCCCTAGCGAGTGTCTGGCACTTCTCGCCGCCTACCCCGTCGTGCTGCTCCACGAGCTGCGACT
GGACGACTGCGAGCCAGACGTCACTGGCTACTGTCGAGAAGTGGCCAAGAGGCTGTCAGCCCTCCGGAACGGCTC
TGACGATGGCCGTTCAAAGACCTGCACCACCGGAACCACCGAATTCACCAGCACCAGCGACGGGAGCCGCGCCAC
TTATTACCCGTCCAACAGCAGCAGAAGTCGCGTCACCTATCACCCGTCCGAGATGAGCTCCAATCCGTGTGACAT
TCGCCAGTTCAAGTTTAGGCAGGTAGATTACTTTTTCGAGGTTTTCGCCCTTCAGCTACACAGCGAATACAAGCG
GCAAAAGATGCGAGTAAACCGACCTTCGACCATGGCCAATCACATCGCCTGCAACTTGAACTCCCACATTGACAA
CTTTGCGCAACACGGCGGCGCCTGTGAGAGGTTGGCCATTATGCGTGAGTCTCATGGGCGACGTCGGTCCCTCAC
CGATACCGATGTCGCCGTGTCCGGGCTGACGGGAAGCTCCTCAGGAGAGATCATGGACCGCCTGTGTCAAGCAGG
ACAAACGGCCAGGACCTTTGCTAAAGGAGACGTCTGCCCCGTCGTCTTCCTCAATTCCATCTTCGCCCTGGGCTG
GGTGGTGGCGCTGGGCATCCCCTGGCAGAGGAGCGGCTCCTTTGTCAATCCCGAGGGCGACGACTCGCTGCTGCC
GACGTGGTACAGTTGCTTCATGATGATGGTCATGTCGACGCTGAGCGCCATCTTGACGTCACTGCTCCTGGAAAT
GAGGAGCATGTGGGATCCCTATGGCAAGGCCATGAACGAGATGGCGTGGATCATTGGCAATGCCTCGGCCCTCGA
CTATCTTCTTCACGACTACTACGATGAAGGGGAGAGCATTATTCGTCCTCATGAGTTTTATTACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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