Protein ID | Ophcf2|03046 |
Gene name | |
Location | scaffold_03:527027..528819 |
Strand | + |
Gene length (bp) | 1792 |
Transcript length (bp) | 1590 |
Coding sequence length (bp) | 1590 |
Protein length (aa) | 530 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 59 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 144 | 163 | 19 |
2 | 419 | 441 | 22 |
3 | 456 | 478 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03046 MAGSVSFPPELGSRRPVDDFMPSLHRDEPPNHATTQSSASSLIGKFLAAGLSGNHTDGHHYNARGNPSSPFNLFG YRSYSPPRLDIYELESMVGCSHLPYNDDRDFDSCCPASIFGSEVERKARNPEARSSSDFQLRPAGHRWWFLVRFF LFLLYCIGLRIFYPNLSRSVSARQEGRIYESEAKGARNASMAITWTETIITSGVCLMVAQGFHGECLALLAAYPV VLLHELRLDDCEPDVTGYCREVAKRLSALRNGSDDGRSKTCTTGTTEFTSTSDGSRATYYPSNSSRSRVTYHPSE MSSNPCDIRQFKFRQVDYFFEVFALQLHSEYKRQKMRVNRPSTMANHIACNLNSHIDNFAQHGGACERLAIMRES HGRRRSLTDTDVAVSGLTGSSSGEIMDRLCQAGQTARTFAKGDVCPVVFLNSIFALGWVVALGIPWQRSGSFVNP EGDDSLLPTWYSCFMMMVMSTLSAILTSLLLEMRSMWDPYGKAMNEMAWIIGNASALDYLLHDYYDEGESIIRPH EFYY* |
Coding | >Ophcf2|03046 ATGGCAGGCTCCGTCAGCTTCCCCCCCGAACTCGGCTCCAGGCGTCCCGTCGACGACTTCATGCCGTCGCTTCAC CGGGACGAGCCGCCAAACCACGCAACCACCCAGTCTTCAGCCTCCAGCCTGATAGGGAAATTCCTCGCCGCCGGC CTCTCCGGGAACCACACGGACGGCCATCACTACAACGCTCGTGGAAACCCGTCTTCGCCCTTCAACCTCTTCGGT TACCGCTCGTACTCTCCGCCACGCCTGGACATTTACGAGTTGGAATCCATGGTCGGCTGCTCCCATCTTCCCTAC AACGACGATAGAGACTTTGATTCCTGCTGTCCTGCCAGCATCTTTGGCTCCGAAGTGGAACGAAAGGCTCGCAAT CCCGAAGCCCGTAGCTCCTCAGACTTCCAACTACGTCCTGCAGGCCATCGTTGGTGGTTCCTCGTCCGATTCTTT CTCTTTCTTCTCTACTGTATCGGGCTTCGCATCTTCTACCCCAACCTCAGCCGCTCTGTTTCCGCGCGTCAAGAG GGCAGAATCTACGAGTCGGAGGCAAAAGGTGCTCGCAACGCTTCAATGGCCATCACCTGGACCGAAACAATCATA ACCTCAGGCGTATGTCTGATGGTGGCACAGGGGTTTCATGGCGAGTGTCTGGCACTTCTCGCCGCCTACCCCGTC GTGCTGCTCCACGAGCTGCGACTGGACGACTGCGAGCCAGACGTCACTGGCTACTGTCGAGAAGTGGCCAAGAGG CTGTCAGCCCTCCGGAACGGCTCTGACGATGGCCGTTCAAAGACCTGCACCACCGGAACCACCGAATTCACCAGC ACCAGCGACGGGAGCCGCGCCACTTATTACCCGTCCAACAGCAGCAGAAGTCGCGTCACCTATCACCCGTCCGAG ATGAGCTCCAATCCGTGTGACATTCGCCAGTTCAAGTTTAGGCAGGTAGATTACTTTTTCGAGGTTTTCGCCCTT CAGCTACACAGCGAATACAAGCGGCAAAAGATGCGAGTAAACCGACCTTCGACCATGGCCAATCACATCGCCTGC AACTTGAACTCCCACATTGACAACTTTGCGCAACACGGCGGCGCCTGTGAGAGGTTGGCCATTATGCGTGAGTCT CATGGGCGACGTCGGTCCCTCACCGATACCGATGTCGCCGTGTCCGGGCTGACGGGAAGCTCCTCAGGAGAGATC ATGGACCGCCTGTGTCAAGCAGGACAAACGGCCAGGACCTTTGCTAAAGGAGACGTCTGCCCCGTCGTCTTCCTC AATTCCATCTTCGCCCTGGGCTGGGTGGTGGCGCTGGGCATCCCCTGGCAGAGGAGCGGCTCCTTTGTCAATCCC GAGGGCGACGACTCGCTGCTGCCGACGTGGTACAGTTGCTTCATGATGATGGTCATGTCGACGCTGAGCGCCATC TTGACGTCACTGCTCCTGGAAATGAGGAGCATGTGGGATCCCTATGGCAAGGCCATGAACGAGATGGCGTGGATC ATTGGCAATGCCTCGGCCCTCGACTATCTTCTTCACGACTACTACGATGAAGGGGAGAGCATTATTCGTCCTCAT GAGTTTTATTACTAG |
Transcript | >Ophcf2|03046 ATGGCAGGCTCCGTCAGCTTCCCCCCCGAACTCGGCTCCAGGCGTCCCGTCGACGACTTCATGCCGTCGCTTCAC CGGGACGAGCCGCCAAACCACGCAACCACCCAGTCTTCAGCCTCCAGCCTGATAGGGAAATTCCTCGCCGCCGGC CTCTCCGGGAACCACACGGACGGCCATCACTACAACGCTCGTGGAAACCCGTCTTCGCCCTTCAACCTCTTCGGT TACCGCTCGTACTCTCCGCCACGCCTGGACATTTACGAGTTGGAATCCATGGTCGGCTGCTCCCATCTTCCCTAC AACGACGATAGAGACTTTGATTCCTGCTGTCCTGCCAGCATCTTTGGCTCCGAAGTGGAACGAAAGGCTCGCAAT CCCGAAGCCCGTAGCTCCTCAGACTTCCAACTACGTCCTGCAGGCCATCGTTGGTGGTTCCTCGTCCGATTCTTT CTCTTTCTTCTCTACTGTATCGGGCTTCGCATCTTCTACCCCAACCTCAGCCGCTCTGTTTCCGCGCGTCAAGAG GGCAGAATCTACGAGTCGGAGGCAAAAGGTGCTCGCAACGCTTCAATGGCCATCACCTGGACCGAAACAATCATA ACCTCAGGCGTATGTCTGATGGTGGCACAGGGGTTTCATGGCGAGTGTCTGGCACTTCTCGCCGCCTACCCCGTC GTGCTGCTCCACGAGCTGCGACTGGACGACTGCGAGCCAGACGTCACTGGCTACTGTCGAGAAGTGGCCAAGAGG CTGTCAGCCCTCCGGAACGGCTCTGACGATGGCCGTTCAAAGACCTGCACCACCGGAACCACCGAATTCACCAGC ACCAGCGACGGGAGCCGCGCCACTTATTACCCGTCCAACAGCAGCAGAAGTCGCGTCACCTATCACCCGTCCGAG ATGAGCTCCAATCCGTGTGACATTCGCCAGTTCAAGTTTAGGCAGGTAGATTACTTTTTCGAGGTTTTCGCCCTT CAGCTACACAGCGAATACAAGCGGCAAAAGATGCGAGTAAACCGACCTTCGACCATGGCCAATCACATCGCCTGC AACTTGAACTCCCACATTGACAACTTTGCGCAACACGGCGGCGCCTGTGAGAGGTTGGCCATTATGCGTGAGTCT CATGGGCGACGTCGGTCCCTCACCGATACCGATGTCGCCGTGTCCGGGCTGACGGGAAGCTCCTCAGGAGAGATC ATGGACCGCCTGTGTCAAGCAGGACAAACGGCCAGGACCTTTGCTAAAGGAGACGTCTGCCCCGTCGTCTTCCTC AATTCCATCTTCGCCCTGGGCTGGGTGGTGGCGCTGGGCATCCCCTGGCAGAGGAGCGGCTCCTTTGTCAATCCC GAGGGCGACGACTCGCTGCTGCCGACGTGGTACAGTTGCTTCATGATGATGGTCATGTCGACGCTGAGCGCCATC TTGACGTCACTGCTCCTGGAAATGAGGAGCATGTGGGATCCCTATGGCAAGGCCATGAACGAGATGGCGTGGATC ATTGGCAATGCCTCGGCCCTCGACTATCTTCTTCACGACTACTACGATGAAGGGGAGAGCATTATTCGTCCTCAT GAGTTTTATTACTAG |
Gene | >Ophcf2|03046 ATGGCAGGCTCCGTCAGCTTCCCCCCCGAACTCGGCTCCAGGCGTCCCGTCGACGACTTCATGCCGTCGCTTCAC CGGGACGAGCCGCCAAACCACGCAACCACCCAGTCTTCAGCCTCCAGCCTGATAGGGAAATTCCTCGCCGCCGGC CTCTCCGGGAACCACACGGACGGCCATCACTACAACGCTCGTGGAAACCCGTCTTCGCCCTTCAACCTCTTCGGT TACCGCTCGTACTCTCCGCCACGCCTGGACATTTACGAGTTGGAATCCATGGTCGGCTGCTCCCATCTTCCCTAC AACGACGATAGAGACTTTGATTCCTGCTGTCCTGCCAGCATCTTTGGCTCCGAAGTGGAACGAAAGGCTCGCAAT CCCGAAGCCCGTAGCTCCTCAGACTTCCAACTACGTCCTGCAGGCCATCGTTGGTGGTTCCTCGTCCGATTCTTT CTCTTTCTTCTCTACTGTATCGGGCTTCGCATCTTCTACCCCAACCTCAGCCGCTCTGTTTCCGCGCGTCAAGAG GGCAGAATCTACGAGTCGGAGGCAAAAGGTGCTCGCAACGCTTCAATGGCCATCACCTGGACCGAAACAATCATA ACCTCAGGCGTATGTCTGATGGTGGCACAGGGGTTTCATGGGTATTCGCCTTGCCGACGCCGTCATCGGCTGCTA ACGGATCCGTAGCGTACGAATCGCACGAGAGCACATGGAACGAATCAACAGCTTCACCTATATGCTGGCCTATGC ATTTCTCAAGTGCTGCGGCGGAGGCACCGACTTCATCGTCTAGCACGTCGTCCGTCTGCACCACCTCACGGCTCA ACCGCTGACGTTCCCTAGCGAGTGTCTGGCACTTCTCGCCGCCTACCCCGTCGTGCTGCTCCACGAGCTGCGACT GGACGACTGCGAGCCAGACGTCACTGGCTACTGTCGAGAAGTGGCCAAGAGGCTGTCAGCCCTCCGGAACGGCTC TGACGATGGCCGTTCAAAGACCTGCACCACCGGAACCACCGAATTCACCAGCACCAGCGACGGGAGCCGCGCCAC TTATTACCCGTCCAACAGCAGCAGAAGTCGCGTCACCTATCACCCGTCCGAGATGAGCTCCAATCCGTGTGACAT TCGCCAGTTCAAGTTTAGGCAGGTAGATTACTTTTTCGAGGTTTTCGCCCTTCAGCTACACAGCGAATACAAGCG GCAAAAGATGCGAGTAAACCGACCTTCGACCATGGCCAATCACATCGCCTGCAACTTGAACTCCCACATTGACAA CTTTGCGCAACACGGCGGCGCCTGTGAGAGGTTGGCCATTATGCGTGAGTCTCATGGGCGACGTCGGTCCCTCAC CGATACCGATGTCGCCGTGTCCGGGCTGACGGGAAGCTCCTCAGGAGAGATCATGGACCGCCTGTGTCAAGCAGG ACAAACGGCCAGGACCTTTGCTAAAGGAGACGTCTGCCCCGTCGTCTTCCTCAATTCCATCTTCGCCCTGGGCTG GGTGGTGGCGCTGGGCATCCCCTGGCAGAGGAGCGGCTCCTTTGTCAATCCCGAGGGCGACGACTCGCTGCTGCC GACGTGGTACAGTTGCTTCATGATGATGGTCATGTCGACGCTGAGCGCCATCTTGACGTCACTGCTCCTGGAAAT GAGGAGCATGTGGGATCCCTATGGCAAGGCCATGAACGAGATGGCGTGGATCATTGGCAATGCCTCGGCCCTCGA CTATCTTCTTCACGACTACTACGATGAAGGGGAGAGCATTATTCGTCCTCATGAGTTTTATTACTAG |