Protein ID | Ophcf2|03038 |
Gene name | |
Location | scaffold_03:498632..501153 |
Strand | - |
Gene length (bp) | 2521 |
Transcript length (bp) | 2043 |
Coding sequence length (bp) | 2043 |
Protein length (aa) | 681 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 516 | 535 | 19 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 0.01 | 0.00 | 0.08 |
Alive | In ants, during behavior modification | 116.51 | 53.67 | 179.35 |
Dead | In ants, recently dead | 112.68 | 49.82 | 175.53 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.241217 | no |
Alive | Dead | 0.903180 | no |
Dead | Fungus | 0.241217 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03038 MLDALFDPFFLQQIQLSLTGPRPTHSPMFPHQPLGSRAMDSAPASRGGTAASFSTPAACATEMLLNQASVADSGT LISPPSSAAPPLSAWPPGHWDPHHFHQPSPDPFFAMGGGEVPPPYPPFSGPSSCSSSSAPAMVSEAARLSWSDGG SPLTVYIQTQTPAQGSSSGPDEEDSDLPSIKMKKKEKSKKRYRSDEVKRSEQQQQQQQQQQSSTGQSTRWKKACL RCRIQKLKCVPLDELNPSSDCAPCQMVSKTSKKTIHRIACHRGKLADVVLFRSGGLKLTERWDGTTMHDVGDRCS PLEVRTIYVSNGCFGEPLQLQVVSFVSRPGDVTARFWYVREGPVGDEVEVRRKKEIDPYCLASIWKTADYFEKYV VDNAIPAMARMTSPVKGCGRDLDEFKFIKRTFAMAIEYYHNLEDDFEDVTGMKRPNQEKRLLGNLFILWFAIRSA HISGDEKLGMKAETKDETYPLFGKVSLPRMIVAQFDSINYTRILSRYGRLVLQDLESFVFRNQPRWWWTIYLCVF ILLSGSTFVSADRYRHARHNHGFRYSIPGFVEDLQDGCNNMLMHWHYYNCKAWPDPNDPFSRHKTLLSELTSAQY DLVMQTMSNERIQKELAIWQRYKDQNGALEPIDTQGRDPEPTPYMGSQTRFDWDHPLYWVSQMFEDRWNPHPTYQ REYVA* |
Coding | >Ophcf2|03038 ATGCTCGACGCCCTCTTCGATCCCTTCTTTCTGCAACAGATTCAGCTGTCCCTGACCGGCCCTCGCCCTACCCAC AGCCCCATGTTCCCGCATCAGCCTCTCGGCTCCAGGGCTATGGATTCGGCACCGGCTTCTCGAGGTGGCACAGCA GCTTCATTCTCGACGCCGGCGGCTTGTGCGACGGAAATGTTGCTCAACCAGGCATCCGTCGCCGACTCAGGCACT CTTATATCCCCCCCGTCTTCTGCTGCTCCGCCCCTTTCCGCCTGGCCACCGGGCCACTGGGACCCTCATCATTTC CATCAGCCCTCCCCCGATCCCTTCTTTGCCATGGGAGGTGGTGAAGTTCCTCCTCCGTACCCGCCCTTTTCCGGT CCGAGCAGCTGCTCATCCTCATCGGCGCCCGCCATGGTTTCCGAAGCTGCGAGGCTCTCTTGGTCGGACGGCGGT TCCCCCCTTACCGTTTATATTCAGACTCAGACGCCGGCTCAGGGTAGCAGCTCAGGCCCTGACGAGGAGGATTCG GACTTGCCGAGCATCAAGATGAAGAAGAAGGAGAAGTCCAAGAAGCGTTACCGGTCGGACGAGGTGAAGCGTAGT GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCGTCGACGGGACAAAGCACGCGTTGGAAGAAGGCGTGTCTG CGGTGTCGAATCCAGAAGCTCAAGTGCGTCCCCCTCGACGAGCTCAACCCATCCTCCGACTGCGCCCCCTGCCAA ATGGTATCCAAGACCTCCAAGAAGACGATCCACCGCATCGCCTGCCACCGCGGCAAGCTCGCCGACGTCGTCCTC TTCCGCTCCGGCGGCCTCAAGCTGACGGAACGCTGGGACGGAACGACGATGCACGACGTAGGAGACCGCTGCTCT CCCCTAGAGGTGCGCACCATATACGTCTCCAACGGCTGCTTCGGCGAGCCGCTTCAGCTGCAGGTCGTGTCGTTT GTCTCGCGGCCGGGAGACGTCACCGCTCGCTTTTGGTATGTTCGGGAGGGGCCGGTCGGGGATGAGGTCGAGGTG AGGCGCAAGAAGGAGATCGATCCGTATTGTCTCGCCAGCATCTGGAAGACGGCGGACTACTTTGAGAAGTATGTT GTTGACAATGCTATTCCTGCCATGGCGAGGATGACTTCACCCGTCAAGGGGTGTGGGCGGGATCTGGATGAGTTC AAGTTCATCAAGCGGACATTTGCCATGGCCATTGAGTATTATCACAACCTCGAGGACGACTTCGAAGACGTCACT GGCATGAAGAGACCAAACCAGGAGAAGAGGCTACTCGGAAACCTCTTTATCCTATGGTTTGCCATCCGCAGCGCC CACATCAGCGGCGACGAAAAGCTCGGCATGAAGGCCGAAACCAAAGACGAAACATACCCCCTCTTCGGCAAGGTC TCCCTTCCACGTATGATCGTAGCCCAATTCGACAGCATCAACTACACGCGTATCCTCAGTCGATACGGCCGCTTG GTGCTTCAGGATCTCGAATCCTTCGTCTTCCGCAATCAGCCTCGCTGGTGGTGGACCATCTATCTCTGCGTCTTC ATCCTGCTCAGCGGATCGACTTTTGTGAGCGCAGATAGGTATCGGCACGCGAGGCATAACCATGGGTTCCGATAC TCTATCCCCGGCTTCGTCGAGGATCTTCAAGACGGCTGTAACAACATGCTCATGCACTGGCATTACTACAACTGC AAGGCCTGGCCCGACCCGAACGACCCCTTCAGCCGACACAAAACCCTCCTGTCCGAACTGACCTCCGCCCAATAC GACCTCGTCATGCAAACCATGTCCAACGAACGCATCCAGAAAGAACTAGCCATCTGGCAGCGATACAAAGACCAG AACGGCGCTCTTGAGCCCATCGATACACAGGGCCGCGACCCCGAACCAACGCCGTACATGGGCTCGCAGACGCGA TTCGACTGGGATCATCCGCTGTATTGGGTGTCGCAGATGTTTGAGGACCGGTGGAATCCGCATCCAACGTATCAG CGGGAGTACGTGGCGTAG |
Transcript | >Ophcf2|03038 ATGCTCGACGCCCTCTTCGATCCCTTCTTTCTGCAACAGATTCAGCTGTCCCTGACCGGCCCTCGCCCTACCCAC AGCCCCATGTTCCCGCATCAGCCTCTCGGCTCCAGGGCTATGGATTCGGCACCGGCTTCTCGAGGTGGCACAGCA GCTTCATTCTCGACGCCGGCGGCTTGTGCGACGGAAATGTTGCTCAACCAGGCATCCGTCGCCGACTCAGGCACT CTTATATCCCCCCCGTCTTCTGCTGCTCCGCCCCTTTCCGCCTGGCCACCGGGCCACTGGGACCCTCATCATTTC CATCAGCCCTCCCCCGATCCCTTCTTTGCCATGGGAGGTGGTGAAGTTCCTCCTCCGTACCCGCCCTTTTCCGGT CCGAGCAGCTGCTCATCCTCATCGGCGCCCGCCATGGTTTCCGAAGCTGCGAGGCTCTCTTGGTCGGACGGCGGT TCCCCCCTTACCGTTTATATTCAGACTCAGACGCCGGCTCAGGGTAGCAGCTCAGGCCCTGACGAGGAGGATTCG GACTTGCCGAGCATCAAGATGAAGAAGAAGGAGAAGTCCAAGAAGCGTTACCGGTCGGACGAGGTGAAGCGTAGT GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCGTCGACGGGACAAAGCACGCGTTGGAAGAAGGCGTGTCTG CGGTGTCGAATCCAGAAGCTCAAGTGCGTCCCCCTCGACGAGCTCAACCCATCCTCCGACTGCGCCCCCTGCCAA ATGGTATCCAAGACCTCCAAGAAGACGATCCACCGCATCGCCTGCCACCGCGGCAAGCTCGCCGACGTCGTCCTC TTCCGCTCCGGCGGCCTCAAGCTGACGGAACGCTGGGACGGAACGACGATGCACGACGTAGGAGACCGCTGCTCT CCCCTAGAGGTGCGCACCATATACGTCTCCAACGGCTGCTTCGGCGAGCCGCTTCAGCTGCAGGTCGTGTCGTTT GTCTCGCGGCCGGGAGACGTCACCGCTCGCTTTTGGTATGTTCGGGAGGGGCCGGTCGGGGATGAGGTCGAGGTG AGGCGCAAGAAGGAGATCGATCCGTATTGTCTCGCCAGCATCTGGAAGACGGCGGACTACTTTGAGAAGTATGTT GTTGACAATGCTATTCCTGCCATGGCGAGGATGACTTCACCCGTCAAGGGGTGTGGGCGGGATCTGGATGAGTTC AAGTTCATCAAGCGGACATTTGCCATGGCCATTGAGTATTATCACAACCTCGAGGACGACTTCGAAGACGTCACT GGCATGAAGAGACCAAACCAGGAGAAGAGGCTACTCGGAAACCTCTTTATCCTATGGTTTGCCATCCGCAGCGCC CACATCAGCGGCGACGAAAAGCTCGGCATGAAGGCCGAAACCAAAGACGAAACATACCCCCTCTTCGGCAAGGTC TCCCTTCCACGTATGATCGTAGCCCAATTCGACAGCATCAACTACACGCGTATCCTCAGTCGATACGGCCGCTTG GTGCTTCAGGATCTCGAATCCTTCGTCTTCCGCAATCAGCCTCGCTGGTGGTGGACCATCTATCTCTGCGTCTTC ATCCTGCTCAGCGGATCGACTTTTGTGAGCGCAGATAGGTATCGGCACGCGAGGCATAACCATGGGTTCCGATAC TCTATCCCCGGCTTCGTCGAGGATCTTCAAGACGGCTGTAACAACATGCTCATGCACTGGCATTACTACAACTGC AAGGCCTGGCCCGACCCGAACGACCCCTTCAGCCGACACAAAACCCTCCTGTCCGAACTGACCTCCGCCCAATAC GACCTCGTCATGCAAACCATGTCCAACGAACGCATCCAGAAAGAACTAGCCATCTGGCAGCGATACAAAGACCAG AACGGCGCTCTTGAGCCCATCGATACACAGGGCCGCGACCCCGAACCAACGCCGTACATGGGCTCGCAGACGCGA TTCGACTGGGATCATCCGCTGTATTGGGTGTCGCAGATGTTTGAGGACCGGTGGAATCCGCATCCAACGTATCAG CGGGAGTACGTGGCGTAG |
Gene | >Ophcf2|03038 ATGCTCGACGCCCTCTTCGATCCCTTCTTTCTGCAACAGATTCAGCTGTCCCTGACCGGCCCTCGCCCTACCCAC AGCCCCATGTTCCCGCATCAGCCTCTCGGCTCCAGGGCTATGGATTCGGCACCGGCTTCTCGAGGTGGCACAGCA GCTTCATTCTCGACGCCGGCGGCTTGTGCGACGGAAATGTTGCTCAACCAGGCATCCGTCGCCGACTCAGGCACT CTTATATCCCCCCCGTCTTCTGCTGCTCCGCCCCTTTCCGCCTGGCCACCGGGCCACTGGGACCCTCATCATTTC CATCAGCCCTCCCCCGATCCCTTCTTTGCCATGGGAGGTGGTGAAGTTCCTCCTCCGTACCCGCCCTTTTCCGGT CCGAGCAGCTGCTCATCCTCATCGGCGCCCGCCATGGTTTCCGAAGCTGCGAGGCTCTCTTGGTCGGACGGCGGT TCCCCCCTTACCGTTTATATTCAGACTCAGACGCCGGCTCAGGGTAGCAGCTCAGGCCCTGACGAGGAGGATTCG GACTTGCCGAGCATCAAGATGAAGAAGAAGGAGAAGTCCAAGAAGCGTTACCGGTCGGACGAGGTGAAGCGTAGT GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCGTCGACGGGACAAAGCACGCGTTGGAAGAAGGCGTGTCTG CGGTGTCGAATCCAGAAGCTCAAGGTCAGTCGTGTCTTGGGTTGCTCGACGAGTTGATTCTCTTGTTCGACTCTT TACCTCTTCTTCCCTTGTTCTCTTACCAGCTCTTTCTCCTCATCAACCTCGCATATGTATTTCCATAACATGTGT ATTTCTATAATCCCCTTCTTCTCCCAAACTCTCCCCTCAAAACTCCTCTTCTCCAACCCTCTCCTCCTAACTCTC CCGCAGTGCGTCCCCCTCGACGAGCTCAACCCATCCTCCGACTGCGCCCCCTGCCAAATGGTATCCAAGACCTCC AAGAAGACGATCCACCGCATCGCCTGCCACCGCGGCAAGCTCGCCGACGTCGTCCTCTTCCGCTCCGGCGGCCTC AAGCTGACGGAACGCTGGGACGGAACGACGATGCACGACGTAGGAGACCGCTGCTCTCCCCTAGAGGTGCGCACC ATATACGTCTCCAACGGCTGCTTCGGCGAGCCGCTTCAGCTGCAGGTCGTGTCGTTTGTCTCGCGGCCGGGAGAC GTCACCGCTCGCTTTTGGTATGTTCGGGAGGGGCCGGTCGGGGATGAGGTCGAGGTGAGGCGCAAGAAGGAGATC GATCCGTATTGTCTCGCCAGCATCTGGAAGACGGCGGACTACTTTGAGAAGTATGTTGTTGACAATGCTATTCCT GCCATGGCGAGGATGACTTCACCCGTCAAGGGGTGTGGGCGGGATCTGGATGAGTTCAAGTTCATCAAGCGGACA TTTGCCATGGCCATTGAGTATTATCACAACCTCGAGGTATGTTGTGTCGGGTTTTGTCGTTGGTTTACGGCTGAC GTTGATGTCTGCTTCAAGGACGACTTCGAAGACGTCACTGGCATGAAGAGACCAAACCAGGAGAAGAGGCTACTC GGAAACCTCTTTATCCTATGGTTTGCCATCCGTAAGTCACGTCCCCCCTCTCATCCCTCTTCCAGGTCCGGCCGT CCCTTTCCCTCTCTCAAACTCGGCGCTGAGAAAGAGAAAAGGCAACTCGACAGGCAGCGCCCACATCAGCGGCGA CGAAAAGCTCGGCATGAAGGCCGAAACCAAAGACGAAACATACCCCCTCTTCGGCAAGGTCTCCCTTCCACGTAT GATCGTAGCCCAATTCGACAGCATCAACTACACGCGTATCCTCAGTCGATACGGCCGCTTGGTGCTTCAGGATCT CGAATCCTTCGTCTTCCGCAATCAGCCTCGCTGGTGGTGGACCATCTATCTCTGCGTCTTCATCCTGCTCAGCGG ATCGACTTTTGTGAGCGCAGATAGGTATCGGCACGCGAGGCATAACCATGGGGTAAAGGTCAGGCGATTGAATCC CCAGTGAGAACAGAGAATGAGAGGCTGACGCCGGACAGTTCCGATACTCTATCCCCGGCTTCGTCGAGGATCTTC AAGACGGCTGTAACAACATGCTCATGCACTGGCATTACTACAACTGCAAGGCCTGGCCCGACCCGAACGACCCCT TCAGCCGACACAAAACCCTCCTGTCCGAACTGACCTCCGCCCAATACGACCTCGTCATGCAAACCATGTCCAACG AACGCATCCAGAAAGAACTAGCCATCTGGCAGCGATACAAAGACCAGAACGGCGCTCGTACGTCGCCTTTCACTC CCCTCTTCGAAACCCGGCTGACGAAGGCTCGCTTCCAGTTGAGCCCATCGATACACAGGGCCGCGACCCCGAACC AACGCCGTACATGGGCTCGCAGACGCGATTCGACTGGGATCATCCGCTGTATTGGGTGTCGCAGATGTTTGAGGA CCGGTGGAATCCGCATCCAACGTATCAGCGGGAGTACGTGGCGTAG |