Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03035
Gene name
Locationscaffold_03:492321..493020
Strand-
Gene length (bp)699
Transcript length (bp)699
Coding sequence length (bp)699
Protein length (aa) 233

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06058 DCP1 Dcp1-like decapping family 2.7E-32 56 181

GO

GO Term Description Terminal node
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA Yes
GO:0043085 positive regulation of catalytic activity Yes
GO:0008047 enzyme activator activity Yes
GO:0044260 cellular macromolecule metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0044238 primary metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0098772 molecular function regulator activity No
GO:1901360 organic cyclic compound metabolic process No
GO:0110156 methylguanosine-cap decapping No
GO:0050790 regulation of catalytic activity No
GO:0043170 macromolecule metabolic process No
GO:0065009 regulation of molecular function No
GO:0044237 cellular metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0044265 cellular macromolecule catabolic process No
GO:0034655 nucleobase-containing compound catabolic process No
GO:0046483 heterocycle metabolic process No
GO:0008152 metabolic process No
GO:0010605 negative regulation of macromolecule metabolic process No
GO:0009056 catabolic process No
GO:0050789 regulation of biological process No
GO:0009987 cellular process No
GO:0048519 negative regulation of biological process No
GO:0006401 RNA catabolic process No
GO:0071704 organic substance metabolic process No
GO:1901361 organic cyclic compound catabolic process No
GO:0019439 aromatic compound catabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0044270 cellular nitrogen compound catabolic process No
GO:0008150 biological_process No
GO:0000956 nuclear-transcribed mRNA catabolic process No
GO:0010468 regulation of gene expression No
GO:0060255 regulation of macromolecule metabolic process No
GO:1901575 organic substance catabolic process No
GO:0016071 mRNA metabolic process No
GO:0030234 enzyme regulator activity No
GO:0065007 biological regulation No
GO:0016070 RNA metabolic process No
GO:0019222 regulation of metabolic process No
GO:0006402 mRNA catabolic process No
GO:0010629 negative regulation of gene expression No
GO:0044093 positive regulation of molecular function No
GO:0110154 RNA decapping No
GO:0009892 negative regulation of metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0044248 cellular catabolic process No
GO:0009057 macromolecule catabolic process No
GO:0046700 heterocycle catabolic process No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.612 0.4679 0.1101 0.0485 0.0658 0.0035 0.1303 0.1426 0.1629 0.0485

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup2428
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1555
Ophiocordyceps australis map64 (Brazil) OphauB2|4798
Ophiocordyceps camponoti-floridani Ophcf2|03035 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|7282
Ophiocordyceps kimflemingae Ophio5|5769
Ophiocordyceps subramaniannii Hirsu2|3445

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03035
MMSGTAPRHNRQPSNLIPGVSDYESDAAAMAAATMASASAQQTTGPYAPPPPRTNTELNLSVLQRYLPSIQSIMS
IAANAVVYTFDSASSSWNKSGIEGTLFVCAQSPLAEDDDNRPRACVFILSRRSLDNLVVDLVRVSHVEVMDELVM
LRVEGDKDGTEEVLGIWIHNDKDETRQINVATMEESWKAVRSGGSAEEVDNPEAGPAMQAIGRRRLSLTDLFGRP
SDPSPGQ*
Coding >Ophcf2|03035
ATGATGAGTGGGACAGCGCCTCGCCACAATCGACAGCCATCGAACCTCATCCCCGGCGTGTCCGACTACGAATCC
GACGCGGCGGCCATGGCGGCGGCGACCATGGCATCGGCGTCGGCACAGCAGACGACCGGTCCCTACGCGCCCCCC
CCACCACGAACGAACACGGAGCTCAACCTGTCAGTACTGCAGCGCTACCTACCATCGATCCAGAGCATCATGAGC
ATCGCGGCAAATGCCGTCGTCTACACCTTTGACAGCGCGTCTTCGAGCTGGAACAAGTCGGGCATCGAGGGCACG
CTCTTCGTGTGCGCCCAGAGCCCGCTGGCCGAGGATGACGACAACAGGCCTCGGGCGTGCGTCTTCATCCTCAGC
CGTCGCAGCCTCGACAACCTGGTGGTGGACCTGGTCAGGGTAAGTCACGTCGAGGTTATGGACGAGCTCGTGATG
CTGCGCGTCGAGGGCGATAAGGACGGAACGGAAGAGGTGCTCGGCATCTGGATCCACAACGATAAGGACGAGACG
AGGCAGATCAACGTGGCGACGATGGAGGAGAGCTGGAAGGCCGTCCGGTCTGGTGGCTCGGCCGAGGAGGTTGAT
AATCCGGAGGCAGGGCCGGCGATGCAGGCTATCGGCAGACGACGTCTCTCCCTGACGGATCTATTCGGAAGGCCG
AGCGATCCGAGCCCCGGGCAGTGA
Transcript >Ophcf2|03035
ATGATGAGTGGGACAGCGCCTCGCCACAATCGACAGCCATCGAACCTCATCCCCGGCGTGTCCGACTACGAATCC
GACGCGGCGGCCATGGCGGCGGCGACCATGGCATCGGCGTCGGCACAGCAGACGACCGGTCCCTACGCGCCCCCC
CCACCACGAACGAACACGGAGCTCAACCTGTCAGTACTGCAGCGCTACCTACCATCGATCCAGAGCATCATGAGC
ATCGCGGCAAATGCCGTCGTCTACACCTTTGACAGCGCGTCTTCGAGCTGGAACAAGTCGGGCATCGAGGGCACG
CTCTTCGTGTGCGCCCAGAGCCCGCTGGCCGAGGATGACGACAACAGGCCTCGGGCGTGCGTCTTCATCCTCAGC
CGTCGCAGCCTCGACAACCTGGTGGTGGACCTGGTCAGGGTAAGTCACGTCGAGGTTATGGACGAGCTCGTGATG
CTGCGCGTCGAGGGCGATAAGGACGGAACGGAAGAGGTGCTCGGCATCTGGATCCACAACGATAAGGACGAGACG
AGGCAGATCAACGTGGCGACGATGGAGGAGAGCTGGAAGGCCGTCCGGTCTGGTGGCTCGGCCGAGGAGGTTGAT
AATCCGGAGGCAGGGCCGGCGATGCAGGCTATCGGCAGACGACGTCTCTCCCTGACGGATCTATTCGGAAGGCCG
AGCGATCCGAGCCCCGGGCAGTGA
Gene >Ophcf2|03035
ATGATGAGTGGGACAGCGCCTCGCCACAATCGACAGCCATCGAACCTCATCCCCGGCGTGTCCGACTACGAATCC
GACGCGGCGGCCATGGCGGCGGCGACCATGGCATCGGCGTCGGCACAGCAGACGACCGGTCCCTACGCGCCCCCC
CCACCACGAACGAACACGGAGCTCAACCTGTCAGTACTGCAGCGCTACCTACCATCGATCCAGAGCATCATGAGC
ATCGCGGCAAATGCCGTCGTCTACACCTTTGACAGCGCGTCTTCGAGCTGGAACAAGTCGGGCATCGAGGGCACG
CTCTTCGTGTGCGCCCAGAGCCCGCTGGCCGAGGATGACGACAACAGGCCTCGGGCGTGCGTCTTCATCCTCAGC
CGTCGCAGCCTCGACAACCTGGTGGTGGACCTGGTCAGGGTAAGTCACGTCGAGGTTATGGACGAGCTCGTGATG
CTGCGCGTCGAGGGCGATAAGGACGGAACGGAAGAGGTGCTCGGCATCTGGATCCACAACGATAAGGACGAGACG
AGGCAGATCAACGTGGCGACGATGGAGGAGAGCTGGAAGGCCGTCCGGTCTGGTGGCTCGGCCGAGGAGGTTGAT
AATCCGGAGGCAGGGCCGGCGATGCAGGCTATCGGCAGACGACGTCTCTCCCTGACGGATCTATTCGGAAGGCCG
AGCGATCCGAGCCCCGGGCAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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