Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02985
Gene name
Locationscaffold_03:322978..323592
Strand-
Gene length (bp)614
Transcript length (bp)540
Coding sequence length (bp)540
Protein length (aa) 180

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04145 Ctr Ctr copper transporter family 3.1E-33 20 147

GO

GO Term Description Terminal node
GO:0035434 copper ion transmembrane transport Yes
GO:0005375 copper ion transmembrane transporter activity Yes
GO:0016021 integral component of membrane Yes
GO:0000041 transition metal ion transport No
GO:0051234 establishment of localization No
GO:0110165 cellular anatomical entity No
GO:0009987 cellular process No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0006810 transport No
GO:0046915 transition metal ion transmembrane transporter activity No
GO:0006825 copper ion transport No
GO:0022857 transmembrane transporter activity No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0031224 intrinsic component of membrane No
GO:0005215 transporter activity No
GO:0098655 cation transmembrane transport No
GO:0051179 localization No
GO:0034220 ion transmembrane transport No
GO:0006812 cation transport No
GO:0008324 cation transmembrane transporter activity No
GO:0098662 inorganic cation transmembrane transport No
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0098660 inorganic ion transmembrane transport No
GO:0015075 ion transmembrane transporter activity No
GO:0030001 metal ion transport No
GO:0055085 transmembrane transport No
GO:0006811 ion transport No
GO:0046873 metal ion transmembrane transporter activity No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 42 61 19
2 120 142 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02985
MDHAHMDMGSGDAADCKISMLWNWYTIDACFLSPGWHIRNGGMFAATCLGVIALVVFVELLRRLGKEYDAFILRQ
ARRHFADRYADEKSFDSSVVTFRATVPQQLIRSAIHAGTFGGAYIVMLLAMYFNGFVILCIFIGAGLGKFLCDWM
VLHIDVDQGRVSDGPHKGSGIEDPSVCCG*
Coding >Ophcf2|02985
ATGGACCACGCTCACATGGACATGGGCTCTGGCGACGCAGCCGACTGCAAGATATCGATGCTCTGGAACTGGTAC
ACCATCGACGCCTGCTTCCTCTCGCCCGGATGGCATATTCGCAACGGTGGCATGTTCGCGGCTACATGCCTCGGC
GTCATTGCTCTCGTCGTCTTCGTCGAGCTTCTACGCCGGCTGGGCAAGGAGTACGATGCCTTCATTCTGCGGCAA
GCGAGGCGGCATTTTGCGGATCGTTATGCCGACGAGAAGAGCTTCGACTCATCCGTCGTCACCTTTCGGGCAACG
GTACCGCAGCAGCTCATCCGCTCGGCCATACACGCTGGCACCTTTGGCGGCGCCTATATAGTCATGCTGCTGGCC
ATGTACTTTAACGGCTTCGTCATTCTTTGCATCTTCATCGGCGCCGGGCTGGGCAAGTTCCTGTGCGACTGGATG
GTTCTTCATATCGACGTCGACCAGGGACGGGTTTCTGATGGGCCGCATAAGGGTAGTGGCATCGAGGATCCCAGT
GTTTGCTGTGGATAG
Transcript >Ophcf2|02985
ATGGACCACGCTCACATGGACATGGGCTCTGGCGACGCAGCCGACTGCAAGATATCGATGCTCTGGAACTGGTAC
ACCATCGACGCCTGCTTCCTCTCGCCCGGATGGCATATTCGCAACGGTGGCATGTTCGCGGCTACATGCCTCGGC
GTCATTGCTCTCGTCGTCTTCGTCGAGCTTCTACGCCGGCTGGGCAAGGAGTACGATGCCTTCATTCTGCGGCAA
GCGAGGCGGCATTTTGCGGATCGTTATGCCGACGAGAAGAGCTTCGACTCATCCGTCGTCACCTTTCGGGCAACG
GTACCGCAGCAGCTCATCCGCTCGGCCATACACGCTGGCACCTTTGGCGGCGCCTATATAGTCATGCTGCTGGCC
ATGTACTTTAACGGCTTCGTCATTCTTTGCATCTTCATCGGCGCCGGGCTGGGCAAGTTCCTGTGCGACTGGATG
GTTCTTCATATCGACGTCGACCAGGGACGGGTTTCTGATGGGCCGCATAAGGGTAGTGGCATCGAGGATCCCAGT
GTTTGCTGTGGATAG
Gene >Ophcf2|02985
ATGGACCACGCTCACATGGACATGGGCTCTGGCGACGCAGCCGACTGCAAGATATCGGTAAGGCTCTCTCTCTCT
CTCTCTCTCTCTCTCTGATGTCTGTCTCACGAGCCGAGCTGACTGGAATTGAACAGATGCTCTGGAACTGGTACA
CCATCGACGCCTGCTTCCTCTCGCCCGGATGGCATATTCGCAACGGTGGCATGTTCGCGGCTACATGCCTCGGCG
TCATTGCTCTCGTCGTCTTCGTCGAGCTTCTACGCCGGCTGGGCAAGGAGTACGATGCCTTCATTCTGCGGCAAG
CGAGGCGGCATTTTGCGGATCGTTATGCCGACGAGAAGAGCTTCGACTCATCCGTCGTCACCTTTCGGGCAACGG
TACCGCAGCAGCTCATCCGCTCGGCCATACACGCTGGCACCTTTGGCGGCGCCTATATAGTCATGCTGCTGGCCA
TGTACTTTAACGGCTTCGTCATTCTTTGCATCTTCATCGGCGCCGGGCTGGGCAAGTTCCTGTGCGACTGGATGG
TTCTTCATATCGACGTCGACCAGGGACGGGTTTCTGATGGGCCGCATAAGGGTAGTGGCATCGAGGATCCCAGTG
TTTGCTGTGGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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