Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02977
Gene name
Locationscaffold_03:293540..295604
Strand-
Gene length (bp)2064
Transcript length (bp)1749
Coding sequence length (bp)1749
Protein length (aa) 583

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00860 Xan_ur_permease Permease family 3.8E-11 95 198
PF00860 Xan_ur_permease Permease family 2.9E-16 247 474
PF00916 Sulfate_transp Sulfate permease family 1.5E-05 372 444

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0015116 sulfate transmembrane transporter activity Yes
GO:0008272 sulfate transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0016021 integral component of membrane Yes
GO:0006820 anion transport No
GO:1901682 sulfur compound transmembrane transporter activity No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No
GO:0009987 cellular process No
GO:0006810 transport No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0031224 intrinsic component of membrane No
GO:0005215 transporter activity No
GO:0015698 inorganic anion transport No
GO:0005575 cellular_component No
GO:0008509 anion transmembrane transporter activity No
GO:0003674 molecular_function No
GO:0015103 inorganic anion transmembrane transporter activity No
GO:0072348 sulfur compound transport No
GO:0015075 ion transmembrane transporter activity No
GO:0006811 ion transport No
GO:0008150 biological_process No
GO:0051179 localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.5

Transmembrane Domains

Domain # Start End Length
1 102 124 22
2 144 166 22
3 186 208 22
4 240 257 17
5 324 346 22
6 366 388 22
7 401 423 22
8 427 446 19
9 459 493 34

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 5.22 1.66 8.77
Alive In ants, during behavior modification 52.91 27.64 78.18
Dead In ants, recently dead 40.41 19.42 61.40

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.000238 yes
Alive Dead 0.155429 no
Dead Fungus 0.000238 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02977
MGWANTINKRAATSPLGHWFRLQGSGHPLSRKDSLFLTEIRAGLATFFAMAYIMAVNSSIVADSGGPCVCRRTAE
DPHCDGHVEYMLCVQGVKRDAVTATAAVSALASVCMGLFANLPIGLAPGMGLNAYFAYTVVGYHGKGPVPYRVAL
TAIFVEGFIFLFLALVGMRQWLARAIPHSIKVATGVGIGLFLSLIGFTYGEGIGLVVGAVATPTQLAGCSPSLLR
DGACPGGDKMRNPTLWLAIFAGGILTVLLAMYRVRGAVIVGIILVSVISWPRDTPVTAFPRTPLGDDAFDFFRRV
VSFHPIRNILNVQRWEVAEYGAQFGLALITFLYVDILDCTGTLYGMARFAGLLDPVTHDFEGSSVAYVVDAMSIS
VGAVLGIPPVTAFVESGAGISEGGKTGLTAVVTGLCFLVAVFFAPIFASIPPWATGCVLILVGSMMASSVTDINW
KYMGDAVPAFLAIVLMPFTYSIANGLIGSICCYAVLNLVVWLLKLLSRGRIVPPNYADKEPWTWRIPGGFFPPWI
VRLFKGHGRFWRRDSPAPTPDSLCRQRKLSSEPGADRSSSAETNSVRGSEWRAGGDR*
Coding >Ophcf2|02977
ATGGGCTGGGCAAACACCATCAACAAGAGGGCAGCAACCAGCCCCCTCGGCCACTGGTTCCGCCTCCAAGGAAGC
GGCCATCCCCTCTCGCGCAAAGACTCCCTGTTCCTCACCGAGATCCGCGCCGGACTGGCAACCTTCTTCGCCATG
GCCTACATCATGGCCGTCAACTCGTCCATCGTCGCCGACTCGGGCGGGCCGTGCGTCTGTCGTCGGACGGCCGAG
GATCCGCATTGTGACGGTCATGTCGAGTACATGCTCTGCGTACAGGGCGTCAAGCGCGATGCTGTCACTGCTACG
GCTGCTGTTTCGGCGCTGGCGTCGGTCTGTATGGGGTTGTTTGCCAATCTTCCCATTGGCCTGGCTCCCGGAATG
GGCCTCAACGCCTACTTCGCCTACACCGTCGTCGGCTACCACGGCAAAGGACCCGTCCCCTATCGAGTAGCCCTG
ACCGCCATCTTCGTCGAGGGCTTCATCTTCCTCTTCCTCGCCCTGGTAGGCATGCGGCAATGGCTGGCCCGCGCG
ATCCCCCACTCCATCAAAGTCGCCACGGGCGTCGGGATAGGCCTCTTCCTCTCCCTCATCGGCTTCACCTACGGC
GAGGGCATCGGCCTTGTCGTCGGCGCTGTCGCCACGCCCACGCAGCTGGCCGGCTGCTCGCCCTCGCTTCTTCGC
GACGGCGCGTGTCCTGGAGGGGATAAGATGCGGAATCCTACGCTGTGGCTCGCCATCTTTGCTGGAGGCATCTTG
ACCGTCCTTCTGGCCATGTATCGCGTCCGAGGAGCCGTCATCGTGGGAATCATCCTCGTCAGCGTCATCTCCTGG
CCGAGAGATACCCCCGTGACCGCCTTTCCGAGGACTCCCCTCGGAGACGACGCCTTCGACTTCTTCCGTCGCGTC
GTCAGCTTCCATCCGATCCGGAATATCCTCAATGTCCAGCGCTGGGAGGTGGCAGAGTACGGTGCTCAGTTCGGC
CTCGCTCTCATCACCTTTCTCTACGTCGATATCCTCGATTGCACCGGCACTTTATACGGCATGGCTCGCTTCGCC
GGTCTTCTCGATCCCGTCACGCACGACTTTGAGGGCTCATCCGTCGCCTACGTCGTCGACGCCATGAGCATCTCC
GTCGGCGCCGTCCTCGGCATCCCTCCGGTCACGGCCTTCGTCGAGTCCGGAGCCGGCATCTCCGAGGGCGGCAAG
ACGGGTCTGACGGCCGTCGTCACCGGCCTCTGCTTCCTCGTCGCCGTCTTCTTCGCTCCCATCTTCGCCTCCATC
CCTCCCTGGGCCACCGGCTGTGTGCTCATACTCGTCGGTTCCATGATGGCCTCCTCCGTGACCGATATCAACTGG
AAGTACATGGGCGACGCTGTTCCCGCCTTTCTCGCCATCGTCCTCATGCCCTTTACCTACTCCATCGCCAACGGT
CTCATCGGAAGCATCTGTTGCTACGCCGTCCTTAACCTCGTCGTCTGGCTCCTCAAGCTGCTCTCCCGTGGCCGA
ATCGTACCTCCCAATTACGCTGACAAGGAGCCCTGGACCTGGCGCATCCCCGGCGGCTTCTTCCCGCCCTGGATC
GTCCGCCTGTTCAAGGGACATGGTCGCTTCTGGCGTCGAGACTCGCCTGCGCCCACACCCGATTCTCTATGCCGC
CAACGCAAGCTCAGCTCCGAGCCGGGCGCCGACCGTTCCTCATCCGCCGAGACCAACTCCGTCAGGGGCTCTGAA
TGGAGAGCCGGCGGCGACCGCTAG
Transcript >Ophcf2|02977
ATGGGCTGGGCAAACACCATCAACAAGAGGGCAGCAACCAGCCCCCTCGGCCACTGGTTCCGCCTCCAAGGAAGC
GGCCATCCCCTCTCGCGCAAAGACTCCCTGTTCCTCACCGAGATCCGCGCCGGACTGGCAACCTTCTTCGCCATG
GCCTACATCATGGCCGTCAACTCGTCCATCGTCGCCGACTCGGGCGGGCCGTGCGTCTGTCGTCGGACGGCCGAG
GATCCGCATTGTGACGGTCATGTCGAGTACATGCTCTGCGTACAGGGCGTCAAGCGCGATGCTGTCACTGCTACG
GCTGCTGTTTCGGCGCTGGCGTCGGTCTGTATGGGGTTGTTTGCCAATCTTCCCATTGGCCTGGCTCCCGGAATG
GGCCTCAACGCCTACTTCGCCTACACCGTCGTCGGCTACCACGGCAAAGGACCCGTCCCCTATCGAGTAGCCCTG
ACCGCCATCTTCGTCGAGGGCTTCATCTTCCTCTTCCTCGCCCTGGTAGGCATGCGGCAATGGCTGGCCCGCGCG
ATCCCCCACTCCATCAAAGTCGCCACGGGCGTCGGGATAGGCCTCTTCCTCTCCCTCATCGGCTTCACCTACGGC
GAGGGCATCGGCCTTGTCGTCGGCGCTGTCGCCACGCCCACGCAGCTGGCCGGCTGCTCGCCCTCGCTTCTTCGC
GACGGCGCGTGTCCTGGAGGGGATAAGATGCGGAATCCTACGCTGTGGCTCGCCATCTTTGCTGGAGGCATCTTG
ACCGTCCTTCTGGCCATGTATCGCGTCCGAGGAGCCGTCATCGTGGGAATCATCCTCGTCAGCGTCATCTCCTGG
CCGAGAGATACCCCCGTGACCGCCTTTCCGAGGACTCCCCTCGGAGACGACGCCTTCGACTTCTTCCGTCGCGTC
GTCAGCTTCCATCCGATCCGGAATATCCTCAATGTCCAGCGCTGGGAGGTGGCAGAGTACGGTGCTCAGTTCGGC
CTCGCTCTCATCACCTTTCTCTACGTCGATATCCTCGATTGCACCGGCACTTTATACGGCATGGCTCGCTTCGCC
GGTCTTCTCGATCCCGTCACGCACGACTTTGAGGGCTCATCCGTCGCCTACGTCGTCGACGCCATGAGCATCTCC
GTCGGCGCCGTCCTCGGCATCCCTCCGGTCACGGCCTTCGTCGAGTCCGGAGCCGGCATCTCCGAGGGCGGCAAG
ACGGGTCTGACGGCCGTCGTCACCGGCCTCTGCTTCCTCGTCGCCGTCTTCTTCGCTCCCATCTTCGCCTCCATC
CCTCCCTGGGCCACCGGCTGTGTGCTCATACTCGTCGGTTCCATGATGGCCTCCTCCGTGACCGATATCAACTGG
AAGTACATGGGCGACGCTGTTCCCGCCTTTCTCGCCATCGTCCTCATGCCCTTTACCTACTCCATCGCCAACGGT
CTCATCGGAAGCATCTGTTGCTACGCCGTCCTTAACCTCGTCGTCTGGCTCCTCAAGCTGCTCTCCCGTGGCCGA
ATCGTACCTCCCAATTACGCTGACAAGGAGCCCTGGACCTGGCGCATCCCCGGCGGCTTCTTCCCGCCCTGGATC
GTCCGCCTGTTCAAGGGACATGGTCGCTTCTGGCGTCGAGACTCGCCTGCGCCCACACCCGATTCTCTATGCCGC
CAACGCAAGCTCAGCTCCGAGCCGGGCGCCGACCGTTCCTCATCCGCCGAGACCAACTCCGTCAGGGGCTCTGAA
TGGAGAGCCGGCGGCGACCGCTAG
Gene >Ophcf2|02977
ATGGGCTGGGCAAACACCATCAACAAGAGGGCAGCAACCAGCCCCCTCGGCCACTGGTTCCGCCTCCAAGGAAGC
GGCCATGTAAGCCACCCCCCCCCCTTTCCCATACTTCACCTCACGACAACCCATCACTGACGCCCACAGCCCCTC
TCGCGCAAAGACTCCCTGTTCCTCACCGAGATCCGCGCCGGACTGGCAACCTTCTTCGCCATGGCCTACATCATG
GCCGTCAACTCGTCCATCGTCGCCGACTCGGGCGGGCCGTGCGTCTGTCGTCGGACGGCCGAGGATCCGCATTGT
GACGGTCATGTCGAGTACATGCTCTGCGTACAGGGCGTCAAGCGCGATGCTGTCACTGCTACGGCTGCTGTTTCG
GCGCTGGCGTCGGTCTGTATGGGGTTGTTTGCCAATCTGTGAGTTGCGCGCGCACTTACACTCACATACACACAC
ACACACACACACACATACATACACACACACACACACATATATATATATATATATACGCATACATACTTTGTTGAC
GATGACGTCTGGCTGATGATGACAAAAGTCCCATTGGCCTGGCTCCCGGAATGGGTGAGTCTTCTCTCACGTCCA
GGAGACAAAGATCCATCCTGACCCCTATATCCAGGCCTCAACGCCTACTTCGCCTACACCGTCGGTAAGCAAAAC
CTCCCCCTTTTACCCCTGAGCCTCACTAACCAATGACCACCCCCAGTCGGCTACCACGGCAAAGGACCCGTCCCC
TATCGAGTAGCCCTGACCGCCATCTTCGTCGAGGGCTTCATCTTCCTCTTCCTCGCCCTGGTAGGCATGCGGCAA
TGGCTGGCCCGCGCGATCCCCCACTCCATCAAAGTCGCCACGGGCGTCGGGATAGGCCTCTTCCTCTCCCTCATC
GGCTTCACCTACGGCGAGGGCATCGGCCTTGTCGTCGGCGCTGTCGCCACGCCCACGCAGCTGGCCGGCTGCTCG
CCCTCGCTTCTTCGCGACGGCGCGTGTCCTGGAGGGGATAAGATGCGGAATCCTACGCTGTGGCTCGCCATCTTT
GCTGGAGGCATCTTGACCGTCCTTCTGGCCATGTATCGCGTCCGAGGAGCCGTCATCGTGGGAATCATCCTCGTC
AGCGTCATCTCCTGGCCGAGAGATACCCCCGTGACCGCCTTTCCGAGGACTCCCCTCGGAGACGACGCCTTCGAC
TTCTTCCGTCGCGTCGTCAGCTTCCATCCGATCCGGAATATCCTCAATGTCCAGCGCTGGGAGGTGGCAGAGTAC
GGTGCTCAGTTCGGCCTCGCTCTCATCACCTTTCTCTACGTCGATATCCTCGATTGCACCGGCACTTTATACGGC
ATGGCTCGCTTCGCCGGTCTTCTCGATCCCGTCACGCACGACTTTGAGGGCTCATCCGTCGCCTACGTCGTCGAC
GCCATGAGCATCTCCGTCGGCGCCGTCCTCGGCATCCCTCCGGTCACGGCCTTCGTCGAGTCCGGAGCCGGCATC
TCCGAGGGCGGCAAGACGGGTCTGACGGCCGTCGTCACCGGCCTCTGCTTCCTCGTCGCCGTCTTCTTCGCTCCC
ATCTTCGCCTCCATCCCTCCCTGGGCCACCGGCTGTGTGCTCATACTCGTCGGTTCCATGATGGCCTCCTCCGTG
ACCGATATCAACTGGAAGTACATGGGCGACGCTGTTCCCGCCTTTCTCGCCATCGTCCTCATGCCCTTTACCTAC
TCCATCGCCAACGGTCTCATCGGAAGCATCTGTTGCTACGCCGTCCTTAACCTCGTCGTCTGGCTCCTCAAGCTG
CTCTCCCGTGGCCGAATCGTACCTCCCAATTACGCTGACAAGGAGCCCTGGACCTGGCGCATCCCCGGCGGCTTC
TTCCCGCCCTGGATCGTCCGCCTGTTCAAGGGACATGGTCGCTTCTGGCGTCGAGACTCGCCTGCGCCCACACCC
GATTCTCTATGCCGCCAACGCAAGCTCAGCTCCGAGCCGGGCGCCGACCGTTCCTCATCCGCCGAGACCAACTCC
GTCAGGGGCTCTGAATGGAGAGCCGGCGGCGACCGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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