© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|02977 |
| Gene name | |
| Location | scaffold_03:293540..295604 |
| Strand | - |
| Gene length (bp) | 2064 |
| Transcript length (bp) | 1749 |
| Coding sequence length (bp) | 1749 |
| Protein length (aa) | 583 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00860 | Xan_ur_permease | Permease family | 3.8E-11 | 95 | 198 |
| PF00860 | Xan_ur_permease | Permease family | 2.9E-16 | 247 | 474 |
| PF00916 | Sulfate_transp | Sulfate permease family | 1.5E-05 | 372 | 444 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0015116 | sulfate transmembrane transporter activity | Yes |
| GO:0008272 | sulfate transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0006820 | anion transport | No |
| GO:1901682 | sulfur compound transmembrane transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| GO:0009987 | cellular process | No |
| GO:0006810 | transport | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005215 | transporter activity | No |
| GO:0015698 | inorganic anion transport | No |
| GO:0005575 | cellular_component | No |
| GO:0008509 | anion transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0015103 | inorganic anion transmembrane transporter activity | No |
| GO:0072348 | sulfur compound transport | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0006811 | ion transport | No |
| GO:0008150 | biological_process | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 102 | 124 | 22 |
| 2 | 144 | 166 | 22 |
| 3 | 186 | 208 | 22 |
| 4 | 240 | 257 | 17 |
| 5 | 324 | 346 | 22 |
| 6 | 366 | 388 | 22 |
| 7 | 401 | 423 | 22 |
| 8 | 427 | 446 | 19 |
| 9 | 459 | 493 | 34 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 5.22 | 1.66 | 8.77 |
| Alive | In ants, during behavior modification | 52.91 | 27.64 | 78.18 |
| Dead | In ants, recently dead | 40.41 | 19.42 | 61.40 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.000238 | yes |
| Alive | Dead | 0.155429 | no |
| Dead | Fungus | 0.000238 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|02977 MGWANTINKRAATSPLGHWFRLQGSGHPLSRKDSLFLTEIRAGLATFFAMAYIMAVNSSIVADSGGPCVCRRTAE DPHCDGHVEYMLCVQGVKRDAVTATAAVSALASVCMGLFANLPIGLAPGMGLNAYFAYTVVGYHGKGPVPYRVAL TAIFVEGFIFLFLALVGMRQWLARAIPHSIKVATGVGIGLFLSLIGFTYGEGIGLVVGAVATPTQLAGCSPSLLR DGACPGGDKMRNPTLWLAIFAGGILTVLLAMYRVRGAVIVGIILVSVISWPRDTPVTAFPRTPLGDDAFDFFRRV VSFHPIRNILNVQRWEVAEYGAQFGLALITFLYVDILDCTGTLYGMARFAGLLDPVTHDFEGSSVAYVVDAMSIS VGAVLGIPPVTAFVESGAGISEGGKTGLTAVVTGLCFLVAVFFAPIFASIPPWATGCVLILVGSMMASSVTDINW KYMGDAVPAFLAIVLMPFTYSIANGLIGSICCYAVLNLVVWLLKLLSRGRIVPPNYADKEPWTWRIPGGFFPPWI VRLFKGHGRFWRRDSPAPTPDSLCRQRKLSSEPGADRSSSAETNSVRGSEWRAGGDR* |
| Coding | >Ophcf2|02977 ATGGGCTGGGCAAACACCATCAACAAGAGGGCAGCAACCAGCCCCCTCGGCCACTGGTTCCGCCTCCAAGGAAGC GGCCATCCCCTCTCGCGCAAAGACTCCCTGTTCCTCACCGAGATCCGCGCCGGACTGGCAACCTTCTTCGCCATG GCCTACATCATGGCCGTCAACTCGTCCATCGTCGCCGACTCGGGCGGGCCGTGCGTCTGTCGTCGGACGGCCGAG GATCCGCATTGTGACGGTCATGTCGAGTACATGCTCTGCGTACAGGGCGTCAAGCGCGATGCTGTCACTGCTACG GCTGCTGTTTCGGCGCTGGCGTCGGTCTGTATGGGGTTGTTTGCCAATCTTCCCATTGGCCTGGCTCCCGGAATG GGCCTCAACGCCTACTTCGCCTACACCGTCGTCGGCTACCACGGCAAAGGACCCGTCCCCTATCGAGTAGCCCTG ACCGCCATCTTCGTCGAGGGCTTCATCTTCCTCTTCCTCGCCCTGGTAGGCATGCGGCAATGGCTGGCCCGCGCG ATCCCCCACTCCATCAAAGTCGCCACGGGCGTCGGGATAGGCCTCTTCCTCTCCCTCATCGGCTTCACCTACGGC GAGGGCATCGGCCTTGTCGTCGGCGCTGTCGCCACGCCCACGCAGCTGGCCGGCTGCTCGCCCTCGCTTCTTCGC GACGGCGCGTGTCCTGGAGGGGATAAGATGCGGAATCCTACGCTGTGGCTCGCCATCTTTGCTGGAGGCATCTTG ACCGTCCTTCTGGCCATGTATCGCGTCCGAGGAGCCGTCATCGTGGGAATCATCCTCGTCAGCGTCATCTCCTGG CCGAGAGATACCCCCGTGACCGCCTTTCCGAGGACTCCCCTCGGAGACGACGCCTTCGACTTCTTCCGTCGCGTC GTCAGCTTCCATCCGATCCGGAATATCCTCAATGTCCAGCGCTGGGAGGTGGCAGAGTACGGTGCTCAGTTCGGC CTCGCTCTCATCACCTTTCTCTACGTCGATATCCTCGATTGCACCGGCACTTTATACGGCATGGCTCGCTTCGCC GGTCTTCTCGATCCCGTCACGCACGACTTTGAGGGCTCATCCGTCGCCTACGTCGTCGACGCCATGAGCATCTCC GTCGGCGCCGTCCTCGGCATCCCTCCGGTCACGGCCTTCGTCGAGTCCGGAGCCGGCATCTCCGAGGGCGGCAAG ACGGGTCTGACGGCCGTCGTCACCGGCCTCTGCTTCCTCGTCGCCGTCTTCTTCGCTCCCATCTTCGCCTCCATC CCTCCCTGGGCCACCGGCTGTGTGCTCATACTCGTCGGTTCCATGATGGCCTCCTCCGTGACCGATATCAACTGG AAGTACATGGGCGACGCTGTTCCCGCCTTTCTCGCCATCGTCCTCATGCCCTTTACCTACTCCATCGCCAACGGT CTCATCGGAAGCATCTGTTGCTACGCCGTCCTTAACCTCGTCGTCTGGCTCCTCAAGCTGCTCTCCCGTGGCCGA ATCGTACCTCCCAATTACGCTGACAAGGAGCCCTGGACCTGGCGCATCCCCGGCGGCTTCTTCCCGCCCTGGATC GTCCGCCTGTTCAAGGGACATGGTCGCTTCTGGCGTCGAGACTCGCCTGCGCCCACACCCGATTCTCTATGCCGC CAACGCAAGCTCAGCTCCGAGCCGGGCGCCGACCGTTCCTCATCCGCCGAGACCAACTCCGTCAGGGGCTCTGAA TGGAGAGCCGGCGGCGACCGCTAG |
| Transcript | >Ophcf2|02977 ATGGGCTGGGCAAACACCATCAACAAGAGGGCAGCAACCAGCCCCCTCGGCCACTGGTTCCGCCTCCAAGGAAGC GGCCATCCCCTCTCGCGCAAAGACTCCCTGTTCCTCACCGAGATCCGCGCCGGACTGGCAACCTTCTTCGCCATG GCCTACATCATGGCCGTCAACTCGTCCATCGTCGCCGACTCGGGCGGGCCGTGCGTCTGTCGTCGGACGGCCGAG GATCCGCATTGTGACGGTCATGTCGAGTACATGCTCTGCGTACAGGGCGTCAAGCGCGATGCTGTCACTGCTACG GCTGCTGTTTCGGCGCTGGCGTCGGTCTGTATGGGGTTGTTTGCCAATCTTCCCATTGGCCTGGCTCCCGGAATG GGCCTCAACGCCTACTTCGCCTACACCGTCGTCGGCTACCACGGCAAAGGACCCGTCCCCTATCGAGTAGCCCTG ACCGCCATCTTCGTCGAGGGCTTCATCTTCCTCTTCCTCGCCCTGGTAGGCATGCGGCAATGGCTGGCCCGCGCG ATCCCCCACTCCATCAAAGTCGCCACGGGCGTCGGGATAGGCCTCTTCCTCTCCCTCATCGGCTTCACCTACGGC GAGGGCATCGGCCTTGTCGTCGGCGCTGTCGCCACGCCCACGCAGCTGGCCGGCTGCTCGCCCTCGCTTCTTCGC GACGGCGCGTGTCCTGGAGGGGATAAGATGCGGAATCCTACGCTGTGGCTCGCCATCTTTGCTGGAGGCATCTTG ACCGTCCTTCTGGCCATGTATCGCGTCCGAGGAGCCGTCATCGTGGGAATCATCCTCGTCAGCGTCATCTCCTGG CCGAGAGATACCCCCGTGACCGCCTTTCCGAGGACTCCCCTCGGAGACGACGCCTTCGACTTCTTCCGTCGCGTC GTCAGCTTCCATCCGATCCGGAATATCCTCAATGTCCAGCGCTGGGAGGTGGCAGAGTACGGTGCTCAGTTCGGC CTCGCTCTCATCACCTTTCTCTACGTCGATATCCTCGATTGCACCGGCACTTTATACGGCATGGCTCGCTTCGCC GGTCTTCTCGATCCCGTCACGCACGACTTTGAGGGCTCATCCGTCGCCTACGTCGTCGACGCCATGAGCATCTCC GTCGGCGCCGTCCTCGGCATCCCTCCGGTCACGGCCTTCGTCGAGTCCGGAGCCGGCATCTCCGAGGGCGGCAAG ACGGGTCTGACGGCCGTCGTCACCGGCCTCTGCTTCCTCGTCGCCGTCTTCTTCGCTCCCATCTTCGCCTCCATC CCTCCCTGGGCCACCGGCTGTGTGCTCATACTCGTCGGTTCCATGATGGCCTCCTCCGTGACCGATATCAACTGG AAGTACATGGGCGACGCTGTTCCCGCCTTTCTCGCCATCGTCCTCATGCCCTTTACCTACTCCATCGCCAACGGT CTCATCGGAAGCATCTGTTGCTACGCCGTCCTTAACCTCGTCGTCTGGCTCCTCAAGCTGCTCTCCCGTGGCCGA ATCGTACCTCCCAATTACGCTGACAAGGAGCCCTGGACCTGGCGCATCCCCGGCGGCTTCTTCCCGCCCTGGATC GTCCGCCTGTTCAAGGGACATGGTCGCTTCTGGCGTCGAGACTCGCCTGCGCCCACACCCGATTCTCTATGCCGC CAACGCAAGCTCAGCTCCGAGCCGGGCGCCGACCGTTCCTCATCCGCCGAGACCAACTCCGTCAGGGGCTCTGAA TGGAGAGCCGGCGGCGACCGCTAG |
| Gene | >Ophcf2|02977 ATGGGCTGGGCAAACACCATCAACAAGAGGGCAGCAACCAGCCCCCTCGGCCACTGGTTCCGCCTCCAAGGAAGC GGCCATGTAAGCCACCCCCCCCCCTTTCCCATACTTCACCTCACGACAACCCATCACTGACGCCCACAGCCCCTC TCGCGCAAAGACTCCCTGTTCCTCACCGAGATCCGCGCCGGACTGGCAACCTTCTTCGCCATGGCCTACATCATG GCCGTCAACTCGTCCATCGTCGCCGACTCGGGCGGGCCGTGCGTCTGTCGTCGGACGGCCGAGGATCCGCATTGT GACGGTCATGTCGAGTACATGCTCTGCGTACAGGGCGTCAAGCGCGATGCTGTCACTGCTACGGCTGCTGTTTCG GCGCTGGCGTCGGTCTGTATGGGGTTGTTTGCCAATCTGTGAGTTGCGCGCGCACTTACACTCACATACACACAC ACACACACACACACATACATACACACACACACACACATATATATATATATATATACGCATACATACTTTGTTGAC GATGACGTCTGGCTGATGATGACAAAAGTCCCATTGGCCTGGCTCCCGGAATGGGTGAGTCTTCTCTCACGTCCA GGAGACAAAGATCCATCCTGACCCCTATATCCAGGCCTCAACGCCTACTTCGCCTACACCGTCGGTAAGCAAAAC CTCCCCCTTTTACCCCTGAGCCTCACTAACCAATGACCACCCCCAGTCGGCTACCACGGCAAAGGACCCGTCCCC TATCGAGTAGCCCTGACCGCCATCTTCGTCGAGGGCTTCATCTTCCTCTTCCTCGCCCTGGTAGGCATGCGGCAA TGGCTGGCCCGCGCGATCCCCCACTCCATCAAAGTCGCCACGGGCGTCGGGATAGGCCTCTTCCTCTCCCTCATC GGCTTCACCTACGGCGAGGGCATCGGCCTTGTCGTCGGCGCTGTCGCCACGCCCACGCAGCTGGCCGGCTGCTCG CCCTCGCTTCTTCGCGACGGCGCGTGTCCTGGAGGGGATAAGATGCGGAATCCTACGCTGTGGCTCGCCATCTTT GCTGGAGGCATCTTGACCGTCCTTCTGGCCATGTATCGCGTCCGAGGAGCCGTCATCGTGGGAATCATCCTCGTC AGCGTCATCTCCTGGCCGAGAGATACCCCCGTGACCGCCTTTCCGAGGACTCCCCTCGGAGACGACGCCTTCGAC TTCTTCCGTCGCGTCGTCAGCTTCCATCCGATCCGGAATATCCTCAATGTCCAGCGCTGGGAGGTGGCAGAGTAC GGTGCTCAGTTCGGCCTCGCTCTCATCACCTTTCTCTACGTCGATATCCTCGATTGCACCGGCACTTTATACGGC ATGGCTCGCTTCGCCGGTCTTCTCGATCCCGTCACGCACGACTTTGAGGGCTCATCCGTCGCCTACGTCGTCGAC GCCATGAGCATCTCCGTCGGCGCCGTCCTCGGCATCCCTCCGGTCACGGCCTTCGTCGAGTCCGGAGCCGGCATC TCCGAGGGCGGCAAGACGGGTCTGACGGCCGTCGTCACCGGCCTCTGCTTCCTCGTCGCCGTCTTCTTCGCTCCC ATCTTCGCCTCCATCCCTCCCTGGGCCACCGGCTGTGTGCTCATACTCGTCGGTTCCATGATGGCCTCCTCCGTG ACCGATATCAACTGGAAGTACATGGGCGACGCTGTTCCCGCCTTTCTCGCCATCGTCCTCATGCCCTTTACCTAC TCCATCGCCAACGGTCTCATCGGAAGCATCTGTTGCTACGCCGTCCTTAACCTCGTCGTCTGGCTCCTCAAGCTG CTCTCCCGTGGCCGAATCGTACCTCCCAATTACGCTGACAAGGAGCCCTGGACCTGGCGCATCCCCGGCGGCTTC TTCCCGCCCTGGATCGTCCGCCTGTTCAAGGGACATGGTCGCTTCTGGCGTCGAGACTCGCCTGCGCCCACACCC GATTCTCTATGCCGCCAACGCAAGCTCAGCTCCGAGCCGGGCGCCGACCGTTCCTCATCCGCCGAGACCAACTCC GTCAGGGGCTCTGAATGGAGAGCCGGCGGCGACCGCTAG |