Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02970
Gene name
Locationscaffold_03:277383..278983
Strand+
Gene length (bp)1600
Transcript length (bp)1317
Coding sequence length (bp)1317
Protein length (aa) 439

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 10 29 19
2 45 62 17
3 96 118 22
4 131 153 22
5 179 201 22
6 213 235 22
7 245 267 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02970
MMELTTSLTIESWILYALGVAVVGCRLVSRRIKLGKWRALMIDDYLMIFAMVNFTGVAVSINEVAKNGSNYMPPE
EAALLSPSRVQMAIHGSIMTFVLEIFTLTATWAIKACLLILYARLTANTMTRQHSLVKVAAVYCALTYVVVTAMF
LFYWCRPTYEYWAVPVRIMQCATYYHHMIFATACNISSDLLLLFIPIPIIIKTRLPAKRKAILCLILGLGVFNIL
AAILNRYYNFSTPNSYVFLYWYMAEVGIAVMVGNLPLCWPILRLVLGNTEKTKTPSYHGDTISGNNRRKRRRDPL
GTTVTDTDWDKLEDAECNGAAGSETSQTQQPGSDQGSQIELVLQGHKHNHIHNTAVSVSGVDEAETKLQRDQEQQ
EQEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLHKSGSEGDMITVTRTVDISSEGPQ*
Coding >Ophcf2|02970
ATGATGGAATTAACGACGTCTTTGACCATCGAGTCGTGGATCCTCTACGCGCTGGGCGTTGCCGTCGTTGGCTGC
CGTCTCGTATCGCGGCGCATCAAGCTTGGCAAATGGAGAGCGCTGATGATTGACGACTACCTCATGATCTTTGCC
ATGGTCAACTTTACCGGCGTGGCTGTTTCCATCAACGAGGTGGCCAAGAATGGCAGCAATTACATGCCGCCCGAG
GAGGCGGCTCTGCTATCGCCTTCGCGCGTCCAGATGGCTATTCACGGAAGCATCATGACGTTTGTGCTCGAGATC
TTCACCCTGACGGCTACTTGGGCCATCAAGGCGTGTCTGCTCATTCTCTACGCACGGCTCACGGCCAACACCATG
ACTCGCCAGCATTCCCTCGTCAAGGTGGCGGCAGTCTACTGTGCGTTGACGTACGTCGTCGTCACAGCCATGTTT
CTCTTTTACTGGTGTAGGCCCACGTACGAGTACTGGGCTGTGCCGGTCAGAATCATGCAATGCGCGACGTATTAT
CACCACATGATATTTGCGACGGCGTGCAATATCTCGTCGGATCTTTTGCTTCTCTTTATTCCGATTCCCATCATC
ATCAAGACGCGGTTGCCGGCTAAGAGAAAAGCCATTCTCTGCCTCATCCTCGGTCTCGGAGTCTTCAACATCCTA
GCAGCCATCCTCAACCGTTACTACAACTTTAGCACGCCCAACTCGTACGTCTTCCTCTACTGGTACATGGCCGAA
GTGGGTATCGCCGTCATGGTGGGCAACCTTCCACTCTGCTGGCCGATCCTCCGGCTCGTGCTCGGCAACACGGAA
AAAACCAAGACGCCCTCGTATCACGGCGACACCATCAGCGGCAACAACCGACGCAAGCGGAGGCGCGACCCGCTC
GGGACGACGGTCACGGACACGGACTGGGACAAGTTGGAGGATGCCGAGTGCAACGGCGCGGCGGGCAGCGAGACT
TCGCAGACGCAGCAGCCGGGATCCGACCAGGGGAGTCAGATCGAGCTGGTGCTGCAGGGCCACAAGCACAATCAC
ATTCACAATACGGCCGTGAGCGTCAGTGGCGTGGACGAGGCCGAGACTAAGCTACAGCGGGATCAGGAGCAGCAG
GAGCAGGAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAACAG
CAGCAACAGCAACAACAGCAGCAACAGCAACAACAGCAGCTTCACAAGTCGGGGTCCGAGGGGGACATGATTACG
GTGACGAGGACGGTGGATATTTCGTCCGAGGGGCCTCAATGA
Transcript >Ophcf2|02970
ATGATGGAATTAACGACGTCTTTGACCATCGAGTCGTGGATCCTCTACGCGCTGGGCGTTGCCGTCGTTGGCTGC
CGTCTCGTATCGCGGCGCATCAAGCTTGGCAAATGGAGAGCGCTGATGATTGACGACTACCTCATGATCTTTGCC
ATGGTCAACTTTACCGGCGTGGCTGTTTCCATCAACGAGGTGGCCAAGAATGGCAGCAATTACATGCCGCCCGAG
GAGGCGGCTCTGCTATCGCCTTCGCGCGTCCAGATGGCTATTCACGGAAGCATCATGACGTTTGTGCTCGAGATC
TTCACCCTGACGGCTACTTGGGCCATCAAGGCGTGTCTGCTCATTCTCTACGCACGGCTCACGGCCAACACCATG
ACTCGCCAGCATTCCCTCGTCAAGGTGGCGGCAGTCTACTGTGCGTTGACGTACGTCGTCGTCACAGCCATGTTT
CTCTTTTACTGGTGTAGGCCCACGTACGAGTACTGGGCTGTGCCGGTCAGAATCATGCAATGCGCGACGTATTAT
CACCACATGATATTTGCGACGGCGTGCAATATCTCGTCGGATCTTTTGCTTCTCTTTATTCCGATTCCCATCATC
ATCAAGACGCGGTTGCCGGCTAAGAGAAAAGCCATTCTCTGCCTCATCCTCGGTCTCGGAGTCTTCAACATCCTA
GCAGCCATCCTCAACCGTTACTACAACTTTAGCACGCCCAACTCGTACGTCTTCCTCTACTGGTACATGGCCGAA
GTGGGTATCGCCGTCATGGTGGGCAACCTTCCACTCTGCTGGCCGATCCTCCGGCTCGTGCTCGGCAACACGGAA
AAAACCAAGACGCCCTCGTATCACGGCGACACCATCAGCGGCAACAACCGACGCAAGCGGAGGCGCGACCCGCTC
GGGACGACGGTCACGGACACGGACTGGGACAAGTTGGAGGATGCCGAGTGCAACGGCGCGGCGGGCAGCGAGACT
TCGCAGACGCAGCAGCCGGGATCCGACCAGGGGAGTCAGATCGAGCTGGTGCTGCAGGGCCACAAGCACAATCAC
ATTCACAATACGGCCGTGAGCGTCAGTGGCGTGGACGAGGCCGAGACTAAGCTACAGCGGGATCAGGAGCAGCAG
GAGCAGGAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAACAG
CAGCAACAGCAACAACAGCAGCAACAGCAACAACAGCAGCTTCACAAGTCGGGGTCCGAGGGGGACATGATTACG
GTGACGAGGACGGTGGATATTTCGTCCGAGGGGCCTCAATGA
Gene >Ophcf2|02970
ATGATGGAATTAACGACGTCTTTGACCATCGAGTCGTGGATCCTCTACGCGCTGGGCGTTGCCGTCGTTGGCTGC
CGTCTCGTATCGCGGCGCATCAAGCTTGGCAAATGGAGAGCGCTGATGATTGACGACTACCTCATGATCTTTGCC
ATGGTATGTTGTTCTCCCCCGTTGTCGGCTTGCTGGGCCGTCTGATGGTCGTCTGTCAAGGTCAACTTTACCGGC
GTGGCTGTTTCCATCAACGAGGTGGCCAAGAATGGCAGCAATTACATGCCGCCCGAGGAGGCGGCTCTGCTATCG
CCTTCGCGCGTCCAGATGGCTATTCACGGAAGCATCATGACGTTTGTGCTCGAGATCTTCACCCTGACGGCTACT
TGGGCCATCAAGGCGTGTCTGCTCATTCTCTACGCACGGCTCACGTACGTCTCTGGTGTGTGTGAAAAGTGACGA
TGCTGCCTGCTGACGCGCCCCAGGGCCAACACCATGACTCGCCAGCATTCCCTCGTCAAGGTGGCGGCAGTCTAC
TGTGCGTTGACGTACGTCGTCGTCACAGCCATGTTTCTCTTTTACTGGTGTAGGCCCACGTACGAGTACTGGGCT
GTGCCGGTCAGAATCAGTGAGTGCTGCCACGTTTGGAGAGATTTCGGACGTGGCTGACGAGTCAAGTGCAATGCG
CGACGTATTATCACCACATGATATTTGCGACGGCGTGCAATATCTCGTCGGATCTTTTGCTTCTCTTTATTCCGA
TTCCCATCATCATCAAGACGCGGTTGCCGGCTAAGAGGTGAGGGGAAGATGATGTCGATGACGGGAGAAACTCGC
GACTGATGAGACGGGTTCACAGAAAAGCCATTCTCTGCCTCATCCTCGGTCTCGGAGTCTTCAACGTGGGTTTTT
ATTCCCCCACGCTGTAGCCAAATCTCGGCAATGCGCTGACGGCCCCGTCCAGATCCTAGCAGCCATCCTCAACCG
TTACTACAACTTTAGCACGCCCAACTCGTACGTCTTCCTCTACTGGTACATGGCCGAAGTGGGTATCGCCGTCAT
GGTGGGCAACCTTCCACTCTGCTGGCCGATCCTCCGGCTCGTGCTCGGCAACACGGAAAAAACCAAGACGCCCTC
GTATCACGGCGACACCATCAGCGGCAACAACCGACGCAAGCGGAGGCGCGACCCGCTCGGGACGACGGTCACGGA
CACGGACTGGGACAAGTTGGAGGATGCCGAGTGCAACGGCGCGGCGGGCAGCGAGACTTCGCAGACGCAGCAGCC
GGGATCCGACCAGGGGAGTCAGATCGAGCTGGTGCTGCAGGGCCACAAGCACAATCACATTCACAATACGGCCGT
GAGCGTCAGTGGCGTGGACGAGGCCGAGACTAAGCTACAGCGGGATCAGGAGCAGCAGGAGCAGGAACAGCAACA
GCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAACAGCAGCAACAGCAACAACA
GCAGCAACAGCAACAACAGCAGCTTCACAAGTCGGGGTCCGAGGGGGACATGATTACGGTGACGAGGACGGTGGA
TATTTCGTCCGAGGGGCCTCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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