Protein ID | Ophcf2|02961 |
Gene name | |
Location | scaffold_03:202525..203719 |
Strand | + |
Gene length (bp) | 1194 |
Transcript length (bp) | 1134 |
Coding sequence length (bp) | 1134 |
Protein length (aa) | 378 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 6.4E-12 | 88 | 201 |
PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 3.1E-09 | 86 | 174 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1413 | 0.0731 | 0.9095 | 0.0758 | 0.1827 | 0.0429 | 0.4059 | 0.3631 | 0.1734 | 0.0065 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.99951 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 0.43 | 0.0 | 0.99 |
Alive | In ants, during behavior modification | 0.81 | 0.0 | 1.89 |
Dead | In ants, recently dead | 0.34 | 0.0 | 0.81 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.336302 | no |
Alive | Dead | 0.116556 | no |
Dead | Fungus | 1.000000 | no |
Orthofinder run ID | 4 |
Orthogroup | 6485 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps camponoti-floridani | Ophcf2|02961 (this protein) |
Ophiocordyceps camponoti-rufipedis | Ophun1|6304 |
Ophiocordyceps subramaniannii | Hirsu2|10301 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02961 MFPKLLIQLVSFFLAATGSLAAADAECRPAEKQLNKTLANYRLPGRNGHSSYLTHDFIPTTCGSRLSVHYTEPTV YGNLTGSAKKPVLILLHGWPQSSYAWRHVTQALSERVPVIAFDTPGYGLSSPCASGADQLTTGTAILEAVTKIYG KNTSIILAGHDRGARIVQRLAVNIDHFPHVRAMGVFIVDILPVYEKFRSFSKPQNAIGYYHWSFLPRGAFALDMI KAYGGGNFIKGSLQGGSGPNEKGLKLFKSDNAWEVYANFFDQVSIANYSISDFRSSATVEYETQEADQKAGRKIK MPCFVFYSEHMQTRSGLSSSGFSMAEIWPNWVATGVKLILEGVGRGIGHFIVEEAPEDTIQAMDSFMDDLEVDKA EA* |
Coding | >Ophcf2|02961 ATGTTTCCCAAGCTCCTCATCCAACTCGTCAGCTTCTTCCTCGCGGCCACAGGAAGCCTCGCAGCCGCCGATGCA GAATGCCGTCCCGCGGAAAAGCAGCTGAACAAGACACTAGCCAACTATCGACTTCCAGGCCGTAACGGCCACTCC TCCTACCTGACCCATGACTTTATCCCCACGACGTGTGGCTCACGCCTCTCGGTTCACTACACGGAACCGACTGTC TACGGGAACCTGACTGGCTCGGCGAAGAAGCCCGTCTTGATCCTGCTGCATGGTTGGCCGCAGTCGAGTTATGCC TGGCGTCATGTCACGCAGGCTCTGTCCGAGCGGGTGCCCGTGATAGCGTTTGATACTCCCGGCTACGGACTCTCC TCTCCCTGTGCTTCCGGGGCCGACCAACTCACAACCGGAACCGCCATCCTCGAAGCAGTGACAAAAATCTACGGT AAGAATACCAGCATCATCCTCGCCGGCCATGATCGCGGCGCACGAATCGTACAACGACTCGCCGTCAACATCGAT CATTTTCCGCACGTTCGAGCCATGGGTGTCTTCATTGTCGACATCCTCCCCGTTTACGAAAAGTTCAGATCATTC TCCAAGCCGCAAAACGCCATCGGATATTATCACTGGTCGTTTCTTCCACGGGGTGCCTTTGCTCTCGACATGATA AAGGCGTACGGAGGCGGCAACTTCATCAAGGGTTCTCTGCAAGGAGGCAGCGGGCCCAACGAGAAAGGGCTCAAG CTCTTCAAGTCGGACAACGCCTGGGAGGTTTACGCCAACTTCTTCGATCAAGTGAGCATCGCCAACTACTCCATT AGTGATTTTCGTTCCTCCGCCACTGTCGAATACGAGACGCAGGAGGCAGATCAGAAAGCTGGTCGAAAGATTAAG ATGCCATGCTTCGTCTTTTACTCGGAACACATGCAGACGCGTTCTGGTCTGAGCAGTTCGGGCTTCAGCATGGCT GAGATCTGGCCGAATTGGGTTGCCACGGGGGTCAAGTTGATCTTGGAAGGCGTTGGGCGCGGGATTGGACACTTT ATCGTTGAGGAGGCTCCAGAAGACACTATACAAGCGATGGACAGCTTCATGGATGACCTAGAGGTCGACAAAGCT GAAGCCTAG |
Transcript | >Ophcf2|02961 ATGTTTCCCAAGCTCCTCATCCAACTCGTCAGCTTCTTCCTCGCGGCCACAGGAAGCCTCGCAGCCGCCGATGCA GAATGCCGTCCCGCGGAAAAGCAGCTGAACAAGACACTAGCCAACTATCGACTTCCAGGCCGTAACGGCCACTCC TCCTACCTGACCCATGACTTTATCCCCACGACGTGTGGCTCACGCCTCTCGGTTCACTACACGGAACCGACTGTC TACGGGAACCTGACTGGCTCGGCGAAGAAGCCCGTCTTGATCCTGCTGCATGGTTGGCCGCAGTCGAGTTATGCC TGGCGTCATGTCACGCAGGCTCTGTCCGAGCGGGTGCCCGTGATAGCGTTTGATACTCCCGGCTACGGACTCTCC TCTCCCTGTGCTTCCGGGGCCGACCAACTCACAACCGGAACCGCCATCCTCGAAGCAGTGACAAAAATCTACGGT AAGAATACCAGCATCATCCTCGCCGGCCATGATCGCGGCGCACGAATCGTACAACGACTCGCCGTCAACATCGAT CATTTTCCGCACGTTCGAGCCATGGGTGTCTTCATTGTCGACATCCTCCCCGTTTACGAAAAGTTCAGATCATTC TCCAAGCCGCAAAACGCCATCGGATATTATCACTGGTCGTTTCTTCCACGGGGTGCCTTTGCTCTCGACATGATA AAGGCGTACGGAGGCGGCAACTTCATCAAGGGTTCTCTGCAAGGAGGCAGCGGGCCCAACGAGAAAGGGCTCAAG CTCTTCAAGTCGGACAACGCCTGGGAGGTTTACGCCAACTTCTTCGATCAAGTGAGCATCGCCAACTACTCCATT AGTGATTTTCGTTCCTCCGCCACTGTCGAATACGAGACGCAGGAGGCAGATCAGAAAGCTGGTCGAAAGATTAAG ATGCCATGCTTCGTCTTTTACTCGGAACACATGCAGACGCGTTCTGGTCTGAGCAGTTCGGGCTTCAGCATGGCT GAGATCTGGCCGAATTGGGTTGCCACGGGGGTCAAGTTGATCTTGGAAGGCGTTGGGCGCGGGATTGGACACTTT ATCGTTGAGGAGGCTCCAGAAGACACTATACAAGCGATGGACAGCTTCATGGATGACCTAGAGGTCGACAAAGCT GAAGCCTAG |
Gene | >Ophcf2|02961 ATGTTTCCCAAGCTCCTCATCCAACTCGTCAGCTTCTTCCTCGCGGCCACAGGAAGCCTCGCAGCCGCCGATGCA GAATGCCGTCCCGCGGAAAAGCAGCTGAACAAGACACTAGCCAACTATCGACTTCCAGGCCGTAACGGCCACTCC TCCTACCTGACCCATGACTTTATCCCCACGACGTGTGGCTCACGCCTCTCGGTTCACTACACGGAACCGACTGTC TACGGGAACCTGACTGGCTCGGCGAAGAAGCCCGTCTTGATCCTGCTGCATGGTTGGCCGCAGTCGAGTTATGCC TGGCGTCATGTCACGCAGGCTCTGTCCGAGCGGGTGCCCGTGATAGCGTTTGATGTAAGAAACATGATGGCAGTA AACCGTCTTGAGACCTGGGCTTTCTGACTGGTTATCAAGACTCCCGGCTACGGACTCTCCTCTCCCTGTGCTTCC GGGGCCGACCAACTCACAACCGGAACCGCCATCCTCGAAGCAGTGACAAAAATCTACGGTAAGAATACCAGCATC ATCCTCGCCGGCCATGATCGCGGCGCACGAATCGTACAACGACTCGCCGTCAACATCGATCATTTTCCGCACGTT CGAGCCATGGGTGTCTTCATTGTCGACATCCTCCCCGTTTACGAAAAGTTCAGATCATTCTCCAAGCCGCAAAAC GCCATCGGATATTATCACTGGTCGTTTCTTCCACGGGGTGCCTTTGCTCTCGACATGATAAAGGCGTACGGAGGC GGCAACTTCATCAAGGGTTCTCTGCAAGGAGGCAGCGGGCCCAACGAGAAAGGGCTCAAGCTCTTCAAGTCGGAC AACGCCTGGGAGGTTTACGCCAACTTCTTCGATCAAGTGAGCATCGCCAACTACTCCATTAGTGATTTTCGTTCC TCCGCCACTGTCGAATACGAGACGCAGGAGGCAGATCAGAAAGCTGGTCGAAAGATTAAGATGCCATGCTTCGTC TTTTACTCGGAACACATGCAGACGCGTTCTGGTCTGAGCAGTTCGGGCTTCAGCATGGCTGAGATCTGGCCGAAT TGGGTTGCCACGGGGGTCAAGTTGATCTTGGAAGGCGTTGGGCGCGGGATTGGACACTTTATCGTTGAGGAGGCT CCAGAAGACACTATACAAGCGATGGACAGCTTCATGGATGACCTAGAGGTCGACAAAGCTGAAGCCTAG |