Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|02961
Gene name
Location	scaffold_03:202525..203719
Strand	+
Gene length (bp)	1194
Transcript length (bp)	1134
Coding sequence length (bp)	1134
Protein length (aa)	378

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12697	Abhydrolase_6	Alpha/beta hydrolase family	6.4E-12	88	201
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	3.1E-09	86	174

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 22	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	0.43	0.0	0.99
Alive	In ants, during behavior modification	0.81	0.0	1.89
Dead	In ants, recently dead	0.34	0.0	0.81

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.336302	no
Alive	Dead	0.116556	no
Dead	Fungus	1.000000	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|02961 MFPKLLIQLVSFFLAATGSLAAADAECRPAEKQLNKTLANYRLPGRNGHSSYLTHDFIPTTCGSRLSVHYTEPTV YGNLTGSAKKPVLILLHGWPQSSYAWRHVTQALSERVPVIAFDTPGYGLSSPCASGADQLTTGTAILEAVTKIYG KNTSIILAGHDRGARIVQRLAVNIDHFPHVRAMGVFIVDILPVYEKFRSFSKPQNAIGYYHWSFLPRGAFALDMI KAYGGGNFIKGSLQGGSGPNEKGLKLFKSDNAWEVYANFFDQVSIANYSISDFRSSATVEYETQEADQKAGRKIK MPCFVFYSEHMQTRSGLSSSGFSMAEIWPNWVATGVKLILEGVGRGIGHFIVEEAPEDTIQAMDSFMDDLEVDKA EA*
Coding	>Ophcf2\|02961 ATGTTTCCCAAGCTCCTCATCCAACTCGTCAGCTTCTTCCTCGCGGCCACAGGAAGCCTCGCAGCCGCCGATGCA GAATGCCGTCCCGCGGAAAAGCAGCTGAACAAGACACTAGCCAACTATCGACTTCCAGGCCGTAACGGCCACTCC TCCTACCTGACCCATGACTTTATCCCCACGACGTGTGGCTCACGCCTCTCGGTTCACTACACGGAACCGACTGTC TACGGGAACCTGACTGGCTCGGCGAAGAAGCCCGTCTTGATCCTGCTGCATGGTTGGCCGCAGTCGAGTTATGCC TGGCGTCATGTCACGCAGGCTCTGTCCGAGCGGGTGCCCGTGATAGCGTTTGATACTCCCGGCTACGGACTCTCC TCTCCCTGTGCTTCCGGGGCCGACCAACTCACAACCGGAACCGCCATCCTCGAAGCAGTGACAAAAATCTACGGT AAGAATACCAGCATCATCCTCGCCGGCCATGATCGCGGCGCACGAATCGTACAACGACTCGCCGTCAACATCGAT CATTTTCCGCACGTTCGAGCCATGGGTGTCTTCATTGTCGACATCCTCCCCGTTTACGAAAAGTTCAGATCATTC TCCAAGCCGCAAAACGCCATCGGATATTATCACTGGTCGTTTCTTCCACGGGGTGCCTTTGCTCTCGACATGATA AAGGCGTACGGAGGCGGCAACTTCATCAAGGGTTCTCTGCAAGGAGGCAGCGGGCCCAACGAGAAAGGGCTCAAG CTCTTCAAGTCGGACAACGCCTGGGAGGTTTACGCCAACTTCTTCGATCAAGTGAGCATCGCCAACTACTCCATT AGTGATTTTCGTTCCTCCGCCACTGTCGAATACGAGACGCAGGAGGCAGATCAGAAAGCTGGTCGAAAGATTAAG ATGCCATGCTTCGTCTTTTACTCGGAACACATGCAGACGCGTTCTGGTCTGAGCAGTTCGGGCTTCAGCATGGCT GAGATCTGGCCGAATTGGGTTGCCACGGGGGTCAAGTTGATCTTGGAAGGCGTTGGGCGCGGGATTGGACACTTT ATCGTTGAGGAGGCTCCAGAAGACACTATACAAGCGATGGACAGCTTCATGGATGACCTAGAGGTCGACAAAGCT GAAGCCTAG
Transcript	>Ophcf2\|02961 ATGTTTCCCAAGCTCCTCATCCAACTCGTCAGCTTCTTCCTCGCGGCCACAGGAAGCCTCGCAGCCGCCGATGCA GAATGCCGTCCCGCGGAAAAGCAGCTGAACAAGACACTAGCCAACTATCGACTTCCAGGCCGTAACGGCCACTCC TCCTACCTGACCCATGACTTTATCCCCACGACGTGTGGCTCACGCCTCTCGGTTCACTACACGGAACCGACTGTC TACGGGAACCTGACTGGCTCGGCGAAGAAGCCCGTCTTGATCCTGCTGCATGGTTGGCCGCAGTCGAGTTATGCC TGGCGTCATGTCACGCAGGCTCTGTCCGAGCGGGTGCCCGTGATAGCGTTTGATACTCCCGGCTACGGACTCTCC TCTCCCTGTGCTTCCGGGGCCGACCAACTCACAACCGGAACCGCCATCCTCGAAGCAGTGACAAAAATCTACGGT AAGAATACCAGCATCATCCTCGCCGGCCATGATCGCGGCGCACGAATCGTACAACGACTCGCCGTCAACATCGAT CATTTTCCGCACGTTCGAGCCATGGGTGTCTTCATTGTCGACATCCTCCCCGTTTACGAAAAGTTCAGATCATTC TCCAAGCCGCAAAACGCCATCGGATATTATCACTGGTCGTTTCTTCCACGGGGTGCCTTTGCTCTCGACATGATA AAGGCGTACGGAGGCGGCAACTTCATCAAGGGTTCTCTGCAAGGAGGCAGCGGGCCCAACGAGAAAGGGCTCAAG CTCTTCAAGTCGGACAACGCCTGGGAGGTTTACGCCAACTTCTTCGATCAAGTGAGCATCGCCAACTACTCCATT AGTGATTTTCGTTCCTCCGCCACTGTCGAATACGAGACGCAGGAGGCAGATCAGAAAGCTGGTCGAAAGATTAAG ATGCCATGCTTCGTCTTTTACTCGGAACACATGCAGACGCGTTCTGGTCTGAGCAGTTCGGGCTTCAGCATGGCT GAGATCTGGCCGAATTGGGTTGCCACGGGGGTCAAGTTGATCTTGGAAGGCGTTGGGCGCGGGATTGGACACTTT ATCGTTGAGGAGGCTCCAGAAGACACTATACAAGCGATGGACAGCTTCATGGATGACCTAGAGGTCGACAAAGCT GAAGCCTAG
Gene	>Ophcf2\|02961 ATGTTTCCCAAGCTCCTCATCCAACTCGTCAGCTTCTTCCTCGCGGCCACAGGAAGCCTCGCAGCCGCCGATGCA GAATGCCGTCCCGCGGAAAAGCAGCTGAACAAGACACTAGCCAACTATCGACTTCCAGGCCGTAACGGCCACTCC TCCTACCTGACCCATGACTTTATCCCCACGACGTGTGGCTCACGCCTCTCGGTTCACTACACGGAACCGACTGTC TACGGGAACCTGACTGGCTCGGCGAAGAAGCCCGTCTTGATCCTGCTGCATGGTTGGCCGCAGTCGAGTTATGCC TGGCGTCATGTCACGCAGGCTCTGTCCGAGCGGGTGCCCGTGATAGCGTTTGATGTAAGAAACATGATGGCAGTA AACCGTCTTGAGACCTGGGCTTTCTGACTGGTTATCAAGACTCCCGGCTACGGACTCTCCTCTCCCTGTGCTTCC GGGGCCGACCAACTCACAACCGGAACCGCCATCCTCGAAGCAGTGACAAAAATCTACGGTAAGAATACCAGCATC ATCCTCGCCGGCCATGATCGCGGCGCACGAATCGTACAACGACTCGCCGTCAACATCGATCATTTTCCGCACGTT CGAGCCATGGGTGTCTTCATTGTCGACATCCTCCCCGTTTACGAAAAGTTCAGATCATTCTCCAAGCCGCAAAAC GCCATCGGATATTATCACTGGTCGTTTCTTCCACGGGGTGCCTTTGCTCTCGACATGATAAAGGCGTACGGAGGC GGCAACTTCATCAAGGGTTCTCTGCAAGGAGGCAGCGGGCCCAACGAGAAAGGGCTCAAGCTCTTCAAGTCGGAC AACGCCTGGGAGGTTTACGCCAACTTCTTCGATCAAGTGAGCATCGCCAACTACTCCATTAGTGATTTTCGTTCC TCCGCCACTGTCGAATACGAGACGCAGGAGGCAGATCAGAAAGCTGGTCGAAAGATTAAGATGCCATGCTTCGTC TTTTACTCGGAACACATGCAGACGCGTTCTGGTCTGAGCAGTTCGGGCTTCAGCATGGCTGAGATCTGGCCGAAT TGGGTTGCCACGGGGGTCAAGTTGATCTTGGAAGGCGTTGGGCGCGGGATTGGACACTTTATCGTTGAGGAGGCT CCAGAAGACACTATACAAGCGATGGACAGCTTCATGGATGACCTAGAGGTCGACAAAGCTGAAGCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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