Protein ID | Ophcf2|02939 |
Gene name | |
Location | scaffold_03:106709..107593 |
Strand | + |
Gene length (bp) | 884 |
Transcript length (bp) | 753 |
Coding sequence length (bp) | 753 |
Protein length (aa) | 251 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1375 | 0.1176 | 0.9453 | 0.1048 | 0.0806 | 0.0107 | 0.1062 | 0.0848 | 0.1317 | 0.0015 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 18 | 0.942803 |
Gene cluster ID | Type of secondary metabolism gene |
---|---|
Cluster 12 | (None) |
Orthofinder run ID | 4 |
Orthogroup | 7330 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps camponoti-floridani | Ophcf2|02939 (this protein) |
Ophiocordyceps camponoti-rufipedis | Ophun1|7484 |
Ophiocordyceps kimflemingae | Ophio5|1447 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02939 MRFSRFVALAASASLVEGGTLYRRSATSPVDAGPMPWDGQIEEGQKYWGPIGEQVQQRGVKITDRGTKCHGACGS MMWFNDPEKSRWDDETKNYKPCTDTDLPRLADICFGQCPNELPFAVYGTAIKRAISCGLIPMGWNKKTNKGYESV AWTPATDTSPAKSKYLDAEGNPKPAPAPAPAPAPSPSSSSSPSPTENSAPSRPVREAAPEAEQPKATSSITTTQP SGSPEGTSSPNATGRNPSSGAVLAC* |
Coding | >Ophcf2|02939 ATGCGTTTCTCTAGATTCGTCGCCCTCGCCGCCTCGGCCTCGCTGGTCGAGGGCGGTACCCTTTACCGCCGCTCC GCGACATCACCGGTCGACGCGGGCCCTATGCCTTGGGATGGACAGATAGAAGAAGGGCAAAAGTACTGGGGACCC ATAGGCGAGCAAGTGCAGCAACGGGGGGTCAAGATCACCGACCGAGGGACCAAATGCCACGGTGCTTGCGGGTCC ATGATGTGGTTCAACGACCCCGAAAAGTCCAGGTGGGACGACGAGACGAAGAACTATAAACCCTGCACCGACACG GACCTCCCCCGGCTCGCCGATATTTGCTTCGGCCAGTGCCCCAATGAACTGCCATTTGCCGTGTATGGCACCGCC ATTAAGCGGGCCATCAGCTGCGGACTTATCCCCATGGGCTGGAACAAAAAGACCAACAAAGGCTACGAGTCCGTG GCCTGGACTCCGGCCACGGACACTTCCCCGGCTAAGTCCAAGTACCTGGACGCGGAAGGGAACCCCAAACCGGCC CCGGCCCCGGCCCCGGCCCCGGCCCCGTCCCCGTCCTCGTCCTCGTCCCCGTCCCCGACCGAGAACTCGGCGCCA TCCCGTCCCGTCCGTGAGGCGGCCCCCGAGGCTGAACAGCCCAAAGCCACGTCCAGCATAACCACCACTCAGCCA TCCGGTTCCCCCGAGGGTACCTCCTCTCCCAACGCTACGGGTCGGAACCCTAGCAGCGGCGCTGTGCTCGCCTGT TGA |
Transcript | >Ophcf2|02939 ATGCGTTTCTCTAGATTCGTCGCCCTCGCCGCCTCGGCCTCGCTGGTCGAGGGCGGTACCCTTTACCGCCGCTCC GCGACATCACCGGTCGACGCGGGCCCTATGCCTTGGGATGGACAGATAGAAGAAGGGCAAAAGTACTGGGGACCC ATAGGCGAGCAAGTGCAGCAACGGGGGGTCAAGATCACCGACCGAGGGACCAAATGCCACGGTGCTTGCGGGTCC ATGATGTGGTTCAACGACCCCGAAAAGTCCAGGTGGGACGACGAGACGAAGAACTATAAACCCTGCACCGACACG GACCTCCCCCGGCTCGCCGATATTTGCTTCGGCCAGTGCCCCAATGAACTGCCATTTGCCGTGTATGGCACCGCC ATTAAGCGGGCCATCAGCTGCGGACTTATCCCCATGGGCTGGAACAAAAAGACCAACAAAGGCTACGAGTCCGTG GCCTGGACTCCGGCCACGGACACTTCCCCGGCTAAGTCCAAGTACCTGGACGCGGAAGGGAACCCCAAACCGGCC CCGGCCCCGGCCCCGGCCCCGGCCCCGTCCCCGTCCTCGTCCTCGTCCCCGTCCCCGACCGAGAACTCGGCGCCA TCCCGTCCCGTCCGTGAGGCGGCCCCCGAGGCTGAACAGCCCAAAGCCACGTCCAGCATAACCACCACTCAGCCA TCCGGTTCCCCCGAGGGTACCTCCTCTCCCAACGCTACGGGTCGGAACCCTAGCAGCGGCGCTGTGCTCGCCTGT TGA |
Gene | >Ophcf2|02939 ATGCGTTTCTCTAGATTCGTCGCCCTCGCCGCCTCGGCCTCGCTGGTCGAGGGCGGTACCCTTTACCGCCGCTCC GCGACATCACCGGTCGACGCGGGCCCTATGCCTTGGGATGGACAGATAGAAGAAGGGCAAAAGTACTGGGGACCC ATAGGCGAGCAAGTGCAGCAACGGGGGGTCAAGATCACCGACCGAGGGACCAAATGCCACGGTGCTTGCGGTAGG GTCCATCTTCTAACGAGACGTGTTGGCTCTCATACTCATCATCATGTCTAAATACAGGGTCCATGATGTGGTTCA ACGACCCCGAAAAGTCCAGGTGGGACGACGAGACGAAGAACTATAAACCCTGCACCGACACGGACCTCCCCCGGC TCGCCGATATTTGCTTCGGCCAGTGCCCCAATGAACTGCCATTTGCCGTGTATGGCACCGCCATTAAGCGGGCCA TCAGCTGCGGACTTATCCCCATGGGCTGGAACAAAAAGACCAACAAAGGCTACGAGTCCGTGGCCTGGACTCCGG CCACGGACACTTCCCCGGCTAAGTCCAAGTACCTGGACGCGGAAGGGAACCCCAAACCGGCCCCGGCCCCGGCCC CGGCCCCGGCCCCGTCCCCGTCCTCGTCCTCGTCCCCGTCCCCGACCGAGAACTCGGCGCCATCCCGTCCCGTCC GTGAGGCGGCCCCCGAGGCTGAACAGCCCAAAGCCACGTCCAGCATAACCACCACTCAGCCATCCGGTTCCCCCG AGGGTACCTCCTCTCCCAACGCTACGGGTCGGAACCCTAGCAGCGGCGCTGTGCGTAAGGAAACCCCCCTTCAGC TCGCGCCGGCCAGATTCATGAGAGTCGACTAACGCGGTTACCATGCAGTCGCCTGTTGA |