Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02939
Gene name
Locationscaffold_03:106709..107593
Strand+
Gene length (bp)884
Transcript length (bp)753
Coding sequence length (bp)753
Protein length (aa) 251

Overview

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PFAM Domains

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1375 0.1176 0.9453 0.1048 0.0806 0.0107 0.1062 0.0848 0.1317 0.0015

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.942803

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

Gene cluster ID Type of secondary metabolism gene
Cluster 12 (None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup7330
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|02939 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|7484
Ophiocordyceps kimflemingae Ophio5|1447

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02939
MRFSRFVALAASASLVEGGTLYRRSATSPVDAGPMPWDGQIEEGQKYWGPIGEQVQQRGVKITDRGTKCHGACGS
MMWFNDPEKSRWDDETKNYKPCTDTDLPRLADICFGQCPNELPFAVYGTAIKRAISCGLIPMGWNKKTNKGYESV
AWTPATDTSPAKSKYLDAEGNPKPAPAPAPAPAPSPSSSSSPSPTENSAPSRPVREAAPEAEQPKATSSITTTQP
SGSPEGTSSPNATGRNPSSGAVLAC*
Coding >Ophcf2|02939
ATGCGTTTCTCTAGATTCGTCGCCCTCGCCGCCTCGGCCTCGCTGGTCGAGGGCGGTACCCTTTACCGCCGCTCC
GCGACATCACCGGTCGACGCGGGCCCTATGCCTTGGGATGGACAGATAGAAGAAGGGCAAAAGTACTGGGGACCC
ATAGGCGAGCAAGTGCAGCAACGGGGGGTCAAGATCACCGACCGAGGGACCAAATGCCACGGTGCTTGCGGGTCC
ATGATGTGGTTCAACGACCCCGAAAAGTCCAGGTGGGACGACGAGACGAAGAACTATAAACCCTGCACCGACACG
GACCTCCCCCGGCTCGCCGATATTTGCTTCGGCCAGTGCCCCAATGAACTGCCATTTGCCGTGTATGGCACCGCC
ATTAAGCGGGCCATCAGCTGCGGACTTATCCCCATGGGCTGGAACAAAAAGACCAACAAAGGCTACGAGTCCGTG
GCCTGGACTCCGGCCACGGACACTTCCCCGGCTAAGTCCAAGTACCTGGACGCGGAAGGGAACCCCAAACCGGCC
CCGGCCCCGGCCCCGGCCCCGGCCCCGTCCCCGTCCTCGTCCTCGTCCCCGTCCCCGACCGAGAACTCGGCGCCA
TCCCGTCCCGTCCGTGAGGCGGCCCCCGAGGCTGAACAGCCCAAAGCCACGTCCAGCATAACCACCACTCAGCCA
TCCGGTTCCCCCGAGGGTACCTCCTCTCCCAACGCTACGGGTCGGAACCCTAGCAGCGGCGCTGTGCTCGCCTGT
TGA
Transcript >Ophcf2|02939
ATGCGTTTCTCTAGATTCGTCGCCCTCGCCGCCTCGGCCTCGCTGGTCGAGGGCGGTACCCTTTACCGCCGCTCC
GCGACATCACCGGTCGACGCGGGCCCTATGCCTTGGGATGGACAGATAGAAGAAGGGCAAAAGTACTGGGGACCC
ATAGGCGAGCAAGTGCAGCAACGGGGGGTCAAGATCACCGACCGAGGGACCAAATGCCACGGTGCTTGCGGGTCC
ATGATGTGGTTCAACGACCCCGAAAAGTCCAGGTGGGACGACGAGACGAAGAACTATAAACCCTGCACCGACACG
GACCTCCCCCGGCTCGCCGATATTTGCTTCGGCCAGTGCCCCAATGAACTGCCATTTGCCGTGTATGGCACCGCC
ATTAAGCGGGCCATCAGCTGCGGACTTATCCCCATGGGCTGGAACAAAAAGACCAACAAAGGCTACGAGTCCGTG
GCCTGGACTCCGGCCACGGACACTTCCCCGGCTAAGTCCAAGTACCTGGACGCGGAAGGGAACCCCAAACCGGCC
CCGGCCCCGGCCCCGGCCCCGGCCCCGTCCCCGTCCTCGTCCTCGTCCCCGTCCCCGACCGAGAACTCGGCGCCA
TCCCGTCCCGTCCGTGAGGCGGCCCCCGAGGCTGAACAGCCCAAAGCCACGTCCAGCATAACCACCACTCAGCCA
TCCGGTTCCCCCGAGGGTACCTCCTCTCCCAACGCTACGGGTCGGAACCCTAGCAGCGGCGCTGTGCTCGCCTGT
TGA
Gene >Ophcf2|02939
ATGCGTTTCTCTAGATTCGTCGCCCTCGCCGCCTCGGCCTCGCTGGTCGAGGGCGGTACCCTTTACCGCCGCTCC
GCGACATCACCGGTCGACGCGGGCCCTATGCCTTGGGATGGACAGATAGAAGAAGGGCAAAAGTACTGGGGACCC
ATAGGCGAGCAAGTGCAGCAACGGGGGGTCAAGATCACCGACCGAGGGACCAAATGCCACGGTGCTTGCGGTAGG
GTCCATCTTCTAACGAGACGTGTTGGCTCTCATACTCATCATCATGTCTAAATACAGGGTCCATGATGTGGTTCA
ACGACCCCGAAAAGTCCAGGTGGGACGACGAGACGAAGAACTATAAACCCTGCACCGACACGGACCTCCCCCGGC
TCGCCGATATTTGCTTCGGCCAGTGCCCCAATGAACTGCCATTTGCCGTGTATGGCACCGCCATTAAGCGGGCCA
TCAGCTGCGGACTTATCCCCATGGGCTGGAACAAAAAGACCAACAAAGGCTACGAGTCCGTGGCCTGGACTCCGG
CCACGGACACTTCCCCGGCTAAGTCCAAGTACCTGGACGCGGAAGGGAACCCCAAACCGGCCCCGGCCCCGGCCC
CGGCCCCGGCCCCGTCCCCGTCCTCGTCCTCGTCCCCGTCCCCGACCGAGAACTCGGCGCCATCCCGTCCCGTCC
GTGAGGCGGCCCCCGAGGCTGAACAGCCCAAAGCCACGTCCAGCATAACCACCACTCAGCCATCCGGTTCCCCCG
AGGGTACCTCCTCTCCCAACGCTACGGGTCGGAACCCTAGCAGCGGCGCTGTGCGTAAGGAAACCCCCCTTCAGC
TCGCGCCGGCCAGATTCATGAGAGTCGACTAACGCGGTTACCATGCAGTCGCCTGTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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