Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02939
Gene name
Locationscaffold_03:106709..107593
Strand+
Gene length (bp)884
Transcript length (bp)753
Coding sequence length (bp)753
Protein length (aa) 251

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02939
MRFSRFVALAASASLVEGGTLYRRSATSPVDAGPMPWDGQIEEGQKYWGPIGEQVQQRGVKITDRGTKCHGACGS
MMWFNDPEKSRWDDETKNYKPCTDTDLPRLADICFGQCPNELPFAVYGTAIKRAISCGLIPMGWNKKTNKGYESV
AWTPATDTSPAKSKYLDAEGNPKPAPAPAPAPAPSPSSSSSPSPTENSAPSRPVREAAPEAEQPKATSSITTTQP
SGSPEGTSSPNATGRNPSSGAVLAC*
Coding >Ophcf2|02939
ATGCGTTTCTCTAGATTCGTCGCCCTCGCCGCCTCGGCCTCGCTGGTCGAGGGCGGTACCCTTTACCGCCGCTCC
GCGACATCACCGGTCGACGCGGGCCCTATGCCTTGGGATGGACAGATAGAAGAAGGGCAAAAGTACTGGGGACCC
ATAGGCGAGCAAGTGCAGCAACGGGGGGTCAAGATCACCGACCGAGGGACCAAATGCCACGGTGCTTGCGGGTCC
ATGATGTGGTTCAACGACCCCGAAAAGTCCAGGTGGGACGACGAGACGAAGAACTATAAACCCTGCACCGACACG
GACCTCCCCCGGCTCGCCGATATTTGCTTCGGCCAGTGCCCCAATGAACTGCCATTTGCCGTGTATGGCACCGCC
ATTAAGCGGGCCATCAGCTGCGGACTTATCCCCATGGGCTGGAACAAAAAGACCAACAAAGGCTACGAGTCCGTG
GCCTGGACTCCGGCCACGGACACTTCCCCGGCTAAGTCCAAGTACCTGGACGCGGAAGGGAACCCCAAACCGGCC
CCGGCCCCGGCCCCGGCCCCGGCCCCGTCCCCGTCCTCGTCCTCGTCCCCGTCCCCGACCGAGAACTCGGCGCCA
TCCCGTCCCGTCCGTGAGGCGGCCCCCGAGGCTGAACAGCCCAAAGCCACGTCCAGCATAACCACCACTCAGCCA
TCCGGTTCCCCCGAGGGTACCTCCTCTCCCAACGCTACGGGTCGGAACCCTAGCAGCGGCGCTGTGCTCGCCTGT
TGA
Transcript >Ophcf2|02939
ATGCGTTTCTCTAGATTCGTCGCCCTCGCCGCCTCGGCCTCGCTGGTCGAGGGCGGTACCCTTTACCGCCGCTCC
GCGACATCACCGGTCGACGCGGGCCCTATGCCTTGGGATGGACAGATAGAAGAAGGGCAAAAGTACTGGGGACCC
ATAGGCGAGCAAGTGCAGCAACGGGGGGTCAAGATCACCGACCGAGGGACCAAATGCCACGGTGCTTGCGGGTCC
ATGATGTGGTTCAACGACCCCGAAAAGTCCAGGTGGGACGACGAGACGAAGAACTATAAACCCTGCACCGACACG
GACCTCCCCCGGCTCGCCGATATTTGCTTCGGCCAGTGCCCCAATGAACTGCCATTTGCCGTGTATGGCACCGCC
ATTAAGCGGGCCATCAGCTGCGGACTTATCCCCATGGGCTGGAACAAAAAGACCAACAAAGGCTACGAGTCCGTG
GCCTGGACTCCGGCCACGGACACTTCCCCGGCTAAGTCCAAGTACCTGGACGCGGAAGGGAACCCCAAACCGGCC
CCGGCCCCGGCCCCGGCCCCGGCCCCGTCCCCGTCCTCGTCCTCGTCCCCGTCCCCGACCGAGAACTCGGCGCCA
TCCCGTCCCGTCCGTGAGGCGGCCCCCGAGGCTGAACAGCCCAAAGCCACGTCCAGCATAACCACCACTCAGCCA
TCCGGTTCCCCCGAGGGTACCTCCTCTCCCAACGCTACGGGTCGGAACCCTAGCAGCGGCGCTGTGCTCGCCTGT
TGA
Gene >Ophcf2|02939
ATGCGTTTCTCTAGATTCGTCGCCCTCGCCGCCTCGGCCTCGCTGGTCGAGGGCGGTACCCTTTACCGCCGCTCC
GCGACATCACCGGTCGACGCGGGCCCTATGCCTTGGGATGGACAGATAGAAGAAGGGCAAAAGTACTGGGGACCC
ATAGGCGAGCAAGTGCAGCAACGGGGGGTCAAGATCACCGACCGAGGGACCAAATGCCACGGTGCTTGCGGTAGG
GTCCATCTTCTAACGAGACGTGTTGGCTCTCATACTCATCATCATGTCTAAATACAGGGTCCATGATGTGGTTCA
ACGACCCCGAAAAGTCCAGGTGGGACGACGAGACGAAGAACTATAAACCCTGCACCGACACGGACCTCCCCCGGC
TCGCCGATATTTGCTTCGGCCAGTGCCCCAATGAACTGCCATTTGCCGTGTATGGCACCGCCATTAAGCGGGCCA
TCAGCTGCGGACTTATCCCCATGGGCTGGAACAAAAAGACCAACAAAGGCTACGAGTCCGTGGCCTGGACTCCGG
CCACGGACACTTCCCCGGCTAAGTCCAAGTACCTGGACGCGGAAGGGAACCCCAAACCGGCCCCGGCCCCGGCCC
CGGCCCCGGCCCCGTCCCCGTCCTCGTCCTCGTCCCCGTCCCCGACCGAGAACTCGGCGCCATCCCGTCCCGTCC
GTGAGGCGGCCCCCGAGGCTGAACAGCCCAAAGCCACGTCCAGCATAACCACCACTCAGCCATCCGGTTCCCCCG
AGGGTACCTCCTCTCCCAACGCTACGGGTCGGAACCCTAGCAGCGGCGCTGTGCGTAAGGAAACCCCCCTTCAGC
TCGCGCCGGCCAGATTCATGAGAGTCGACTAACGCGGTTACCATGCAGTCGCCTGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail