Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02935
Gene name
Locationscaffold_03:89809..90268
Strand-
Gene length (bp)459
Transcript length (bp)402
Coding sequence length (bp)402
Protein length (aa) 134

Overview

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PFAM Domains

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.927 0.1013 0.0934 0.1597 0.3781 0.0391 0.2501 0.1169 0.5041 0.0706

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

Gene cluster ID Type of secondary metabolism gene
Cluster 12 (None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup6257
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|02935 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|1181
Ophiocordyceps kimflemingae Ophio5|1442
Ophiocordyceps subramaniannii Hirsu2|7840

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02935
MAIDHTCLAVPKDKFRECLNIYLEALKPLGYEIRHQYGETVIGLGAPDKHIPGYQQADFWLVGIDASSSHGLHLA
FTAPDRPTVDAFYTAAIKAGAKDNGAPGVRTMYHPNYYGAFILDPAGNNLEAVCHSAP*
Coding >Ophcf2|02935
ATGGCCATCGACCATACATGCCTTGCCGTCCCAAAGGACAAGTTCCGAGAATGCCTAAATATCTATCTCGAAGCT
CTTAAGCCGCTCGGTTACGAGATCCGCCATCAGTACGGCGAGACCGTCATCGGTCTGGGCGCTCCAGACAAGCAT
ATCCCGGGCTACCAACAGGCCGACTTCTGGCTCGTGGGCATCGATGCATCCTCTAGCCACGGCCTGCACCTCGCC
TTTACGGCTCCGGACCGGCCAACTGTCGATGCCTTCTACACTGCTGCCATCAAGGCCGGTGCCAAGGACAACGGG
GCCCCAGGAGTGCGGACCATGTATCACCCGAATTATTATGGTGCCTTTATCCTCGATCCGGCTGGCAACAACCTC
GAGGCTGTGTGCCACTCGGCCCCGTAG
Transcript >Ophcf2|02935
ATGGCCATCGACCATACATGCCTTGCCGTCCCAAAGGACAAGTTCCGAGAATGCCTAAATATCTATCTCGAAGCT
CTTAAGCCGCTCGGTTACGAGATCCGCCATCAGTACGGCGAGACCGTCATCGGTCTGGGCGCTCCAGACAAGCAT
ATCCCGGGCTACCAACAGGCCGACTTCTGGCTCGTGGGCATCGATGCATCCTCTAGCCACGGCCTGCACCTCGCC
TTTACGGCTCCGGACCGGCCAACTGTCGATGCCTTCTACACTGCTGCCATCAAGGCCGGTGCCAAGGACAACGGG
GCCCCAGGAGTGCGGACCATGTATCACCCGAATTATTATGGTGCCTTTATCCTCGATCCGGCTGGCAACAACCTC
GAGGCTGTGTGCCACTCGGCCCCGTAG
Gene >Ophcf2|02935
ATGGCCATCGACCATACATGCCTTGCCGTCCCAAAGGACAAGTTCCGAGAATGCCTAAATATCTATCTCGAAGCT
CTTAAGCCGCTCGGTTACGAGATCCGCCATCAGTACGGCGAGACCGTCATCGGTCTGGGCGCTCCAGACAAGCAT
ATCCCGGGCTACCAACAGGCCGACTTCTGGCTCGTGGGCATCGATGCATCCTCTAGCCACGGCCTGCACCTCGCC
TTTACGGCTCCGGGTGAGATTGCCTTGTCCGGACACGTTGAGAATGCGCGCTGACGTGTCGGGCGTTTAGACCGG
CCAACTGTCGATGCCTTCTACACTGCTGCCATCAAGGCCGGTGCCAAGGACAACGGGGCCCCAGGAGTGCGGACC
ATGTATCACCCGAATTATTATGGTGCCTTTATCCTCGATCCGGCTGGCAACAACCTCGAGGCTGTGTGCCACTCG
GCCCCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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