Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02925
Gene name
Locationscaffold_03:65171..66403
Strand-
Gene length (bp)1232
Transcript length (bp)1089
Coding sequence length (bp)1089
Protein length (aa) 363

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10058 zinc_ribbon_10 Predicted integral membrane zinc-ribbon metal-binding protein 2.9E-19 245 301

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.5

Transmembrane Domains

Domain # Start End Length
1 47 69 22
2 79 101 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02925
MVSFWPWKGDESSPASFEKTLSALSVKIADSQSRLDRARNSARRTKALWTLYLSFAYVVYAIVLLLVVGHRNLGA
YEWTGMAGGPVLIYGTRALITTLFGFHTDRLADRLRDQLETRAKTIQQLKDATKYDSTMELIEKYGGPDRARSRS
RAPDSGSDSEVSHDKKKNGSTTSASNRTLMIPPPTANLSRALHHDSPKSHPATIPKQQQQQQKQQQPSPGADFAP
NAFSTHASYAQPASPDSRHWYDRIFDILLGEDEAAPRNRFALICHDCRLVNGQAPPGTKSLAELGSWRCMACGVI
NEHQPDSLVDSADVRGRSTSARGDSLSPPAVDEKDQTPVEDPVADGPAAGVRSRRAKAEASK*
Coding >Ophcf2|02925
ATGGTGTCGTTTTGGCCCTGGAAGGGCGACGAATCCTCTCCCGCCTCGTTCGAAAAGACGCTCTCGGCTCTCTCG
GTCAAGATCGCAGACTCTCAATCCCGGCTCGACCGAGCGCGTAACAGCGCCCGACGCACCAAAGCCCTCTGGACC
CTATATCTGTCCTTCGCTTACGTCGTCTACGCCATCGTCTTGCTCCTCGTCGTTGGTCACCGTAACCTGGGCGCC
TACGAATGGACCGGGATGGCGGGCGGGCCTGTTCTAATATACGGCACGCGCGCCCTCATAACAACTCTCTTCGGC
TTCCACACCGACCGGCTGGCAGACCGGCTACGAGACCAGCTTGAGACGCGCGCAAAGACGATTCAACAGCTCAAA
GATGCCACAAAGTACGACTCAACCATGGAGCTCATCGAAAAGTACGGCGGCCCCGATCGCGCCCGCAGCCGCAGC
CGAGCCCCCGACTCCGGCTCCGACTCGGAAGTCAGCCACGACAAGAAGAAGAACGGGTCGACGACATCAGCGTCG
AATCGCACCCTGATGATTCCCCCGCCAACAGCCAACCTCTCACGCGCCCTCCATCACGATTCCCCCAAGTCACAT
CCCGCCACGATCCCTAAACAACAGCAGCAGCAGCAGAAACAACAGCAGCCATCCCCAGGTGCCGACTTCGCCCCC
AACGCCTTCAGCACCCACGCCTCATACGCGCAACCAGCCTCCCCCGACTCCCGCCACTGGTACGACCGCATCTTC
GACATCCTTCTTGGCGAGGACGAGGCTGCGCCCAGGAACCGCTTCGCTCTCATCTGCCACGACTGTCGCCTCGTC
AACGGCCAGGCCCCCCCCGGCACAAAGTCCCTTGCCGAGCTGGGTTCCTGGCGCTGCATGGCCTGCGGTGTCATA
AACGAGCATCAACCCGATTCGCTCGTCGACAGTGCCGACGTCCGTGGTCGATCCACTTCGGCTCGTGGTGACTCT
CTTTCCCCTCCCGCCGTTGACGAAAAGGACCAGACTCCCGTCGAGGATCCAGTGGCCGATGGCCCGGCTGCGGGT
GTCCGATCGCGCCGCGCAAAGGCAGAGGCGTCCAAGTAG
Transcript >Ophcf2|02925
ATGGTGTCGTTTTGGCCCTGGAAGGGCGACGAATCCTCTCCCGCCTCGTTCGAAAAGACGCTCTCGGCTCTCTCG
GTCAAGATCGCAGACTCTCAATCCCGGCTCGACCGAGCGCGTAACAGCGCCCGACGCACCAAAGCCCTCTGGACC
CTATATCTGTCCTTCGCTTACGTCGTCTACGCCATCGTCTTGCTCCTCGTCGTTGGTCACCGTAACCTGGGCGCC
TACGAATGGACCGGGATGGCGGGCGGGCCTGTTCTAATATACGGCACGCGCGCCCTCATAACAACTCTCTTCGGC
TTCCACACCGACCGGCTGGCAGACCGGCTACGAGACCAGCTTGAGACGCGCGCAAAGACGATTCAACAGCTCAAA
GATGCCACAAAGTACGACTCAACCATGGAGCTCATCGAAAAGTACGGCGGCCCCGATCGCGCCCGCAGCCGCAGC
CGAGCCCCCGACTCCGGCTCCGACTCGGAAGTCAGCCACGACAAGAAGAAGAACGGGTCGACGACATCAGCGTCG
AATCGCACCCTGATGATTCCCCCGCCAACAGCCAACCTCTCACGCGCCCTCCATCACGATTCCCCCAAGTCACAT
CCCGCCACGATCCCTAAACAACAGCAGCAGCAGCAGAAACAACAGCAGCCATCCCCAGGTGCCGACTTCGCCCCC
AACGCCTTCAGCACCCACGCCTCATACGCGCAACCAGCCTCCCCCGACTCCCGCCACTGGTACGACCGCATCTTC
GACATCCTTCTTGGCGAGGACGAGGCTGCGCCCAGGAACCGCTTCGCTCTCATCTGCCACGACTGTCGCCTCGTC
AACGGCCAGGCCCCCCCCGGCACAAAGTCCCTTGCCGAGCTGGGTTCCTGGCGCTGCATGGCCTGCGGTGTCATA
AACGAGCATCAACCCGATTCGCTCGTCGACAGTGCCGACGTCCGTGGTCGATCCACTTCGGCTCGTGGTGACTCT
CTTTCCCCTCCCGCCGTTGACGAAAAGGACCAGACTCCCGTCGAGGATCCAGTGGCCGATGGCCCGGCTGCGGGT
GTCCGATCGCGCCGCGCAAAGGCAGAGGCGTCCAAGTAG
Gene >Ophcf2|02925
ATGGTGTCGTTTTGGCCCTGGAAGGTCAGCAGCCTCTTCCCGCACACAGACGAGATGGAACCAGGCTGACGCAAT
ATCTCGTGCGAGAAAAGGGCGACGAATCCTCTCCCGCCTCGTTCGAAAAGACGCTCTCGGCTCTCTCGGTCAAGA
TCGCAGACTCTCAATCCCGGCTCGACCGAGCGCGTAACAGCGCCCGACGCACCAAAGCCCTCTGGACCCTATATC
TGTCCTTCGCTTACGTCGTCTACGCCATCGTCTTGCTCCTCGTCGTTGGTCACCGTAACCTGGGCGCCTACGAAT
GGACCGGGATGGCGGGCGGGCCTGTTCTGTAAGCCCAACCACCGGACTTGCGAAGCTGCCTGCTCCTCGTCCTTG
AACGCGATGGTGGTAATACGGACTATAGAATATACGGCACGCGCGCCCTCATAACAACTCTCTTCGGCTTCCACA
CCGACCGGCTGGCAGACCGGCTACGAGACCAGCTTGAGACGCGCGCAAAGACGATTCAACAGCTCAAAGATGCCA
CAAAGTACGACTCAACCATGGAGCTCATCGAAAAGTACGGCGGCCCCGATCGCGCCCGCAGCCGCAGCCGAGCCC
CCGACTCCGGCTCCGACTCGGAAGTCAGCCACGACAAGAAGAAGAACGGGTCGACGACATCAGCGTCGAATCGCA
CCCTGATGATTCCCCCGCCAACAGCCAACCTCTCACGCGCCCTCCATCACGATTCCCCCAAGTCACATCCCGCCA
CGATCCCTAAACAACAGCAGCAGCAGCAGAAACAACAGCAGCCATCCCCAGGTGCCGACTTCGCCCCCAACGCCT
TCAGCACCCACGCCTCATACGCGCAACCAGCCTCCCCCGACTCCCGCCACTGGTACGACCGCATCTTCGACATCC
TTCTTGGCGAGGACGAGGCTGCGCCCAGGAACCGCTTCGCTCTCATCTGCCACGACTGTCGCCTCGTCAACGGCC
AGGCCCCCCCCGGCACAAAGTCCCTTGCCGAGCTGGGTTCCTGGCGCTGCATGGCCTGCGGTGTCATAAACGAGC
ATCAACCCGATTCGCTCGTCGACAGTGCCGACGTCCGTGGTCGATCCACTTCGGCTCGTGGTGACTCTCTTTCCC
CTCCCGCCGTTGACGAAAAGGACCAGACTCCCGTCGAGGATCCAGTGGCCGATGGCCCGGCTGCGGGTGTCCGAT
CGCGCCGCGCAAAGGCAGAGGCGTCCAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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