Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02923
Gene name
Locationscaffold_03:61759..62304
Strand+
Gene length (bp)545
Transcript length (bp)495
Coding sequence length (bp)495
Protein length (aa) 165

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.5

Transmembrane Domains

Domain # Start End Length
1 58 89 31

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02923
MNGTKPGEGQKPPLSSEASSNGSTSLVAKKRKKDVKPIITTDAGADAGYEYESLLSFVLVLRFFCVLPCLVPTLR
PLVVALVVVIVIVVQPLATRETKKWAEQPSCPVAAEKAVHSWVYRPCTGDCHGSGGTAVHGLVPPPPPEAAASLR
RYLDHRQVYLLPRL*
Coding >Ophcf2|02923
ATGAACGGCACCAAGCCGGGCGAGGGCCAGAAGCCTCCCCTATCCTCCGAGGCCAGCTCCAACGGCAGCACCAGC
CTGGTGGCCAAGAAGCGCAAGAAGGACGTCAAGCCCATCATCACGACGGACGCCGGGGCCGATGCAGGGTACGAA
TACGAGTCTCTTTTGTCTTTTGTCCTTGTTCTGCGCTTCTTCTGCGTTCTGCCATGTTTGGTACCGACCTTGCGG
CCCTTGGTTGTCGCCCTCGTCGTCGTCATCGTCATCGTCGTCCAGCCGCTGGCCACGAGGGAGACCAAGAAGTGG
GCTGAGCAGCCATCCTGCCCAGTGGCAGCTGAGAAAGCAGTCCATTCATGGGTGTACCGGCCGTGCACCGGAGAC
TGCCACGGCTCGGGAGGTACCGCCGTCCACGGCCTCGTACCCCCGCCGCCGCCCGAAGCCGCGGCCTCGCTGCGC
CGGTACCTCGACCACCGACAGGTCTACCTCCTCCCGCGCCTTTAG
Transcript >Ophcf2|02923
ATGAACGGCACCAAGCCGGGCGAGGGCCAGAAGCCTCCCCTATCCTCCGAGGCCAGCTCCAACGGCAGCACCAGC
CTGGTGGCCAAGAAGCGCAAGAAGGACGTCAAGCCCATCATCACGACGGACGCCGGGGCCGATGCAGGGTACGAA
TACGAGTCTCTTTTGTCTTTTGTCCTTGTTCTGCGCTTCTTCTGCGTTCTGCCATGTTTGGTACCGACCTTGCGG
CCCTTGGTTGTCGCCCTCGTCGTCGTCATCGTCATCGTCGTCCAGCCGCTGGCCACGAGGGAGACCAAGAAGTGG
GCTGAGCAGCCATCCTGCCCAGTGGCAGCTGAGAAAGCAGTCCATTCATGGGTGTACCGGCCGTGCACCGGAGAC
TGCCACGGCTCGGGAGGTACCGCCGTCCACGGCCTCGTACCCCCGCCGCCGCCCGAAGCCGCGGCCTCGCTGCGC
CGGTACCTCGACCACCGACAGGTCTACCTCCTCCCGCGCCTTTAG
Gene >Ophcf2|02923
ATGAACGGCACCAAGCCGGGCGAGGGCCAGAAGCCTCCCCTATCCTCCGAGGCCAGCTCCAACGGCAGCACCAGC
CTGGTGGCCAAGAAGCGCAAGAAGGACGTCAAGCCCATCATCACGACGGACGCCGGGGCCGATGCAGGGTACGAA
TACGAGTCTCTTTTGTCTTTTGTCCTTGTTCTGCGCTTCTTCTGCGTTCTGCCATGTTTGGTACCGACCTTGCGG
CCCTTGGTTGTCGCCCTCGTCGTCGTCATCGTCATCGTCGTCCAGTCAGACAGGCCAGGCGAGCGCATGGCCCTG
TCGGCTGATGCTGCCCAAGGCCGCTGGCCACGAGGGAGACCAAGAAGTGGGCTGAGCAGCCATCCTGCCCAGTGG
CAGCTGAGAAAGCAGTCCATTCATGGGTGTACCGGCCGTGCACCGGAGACTGCCACGGCTCGGGAGGTACCGCCG
TCCACGGCCTCGTACCCCCGCCGCCGCCCGAAGCCGCGGCCTCGCTGCGCCGGTACCTCGACCACCGACAGGTCT
ACCTCCTCCCGCGCCTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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