Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02921
Gene name
Locationscaffold_03:57144..58714
Strand-
Gene length (bp)1570
Transcript length (bp)1407
Coding sequence length (bp)1407
Protein length (aa) 469

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10104 Brr6_like_C_C Di-sulfide bridge nucleocytoplasmic transport domain 1.7E-36 245 368

GO

GO Term Description Terminal node
GO:0055088 lipid homeostasis Yes
GO:0031965 nuclear membrane Yes
GO:0005575 cellular_component No
GO:0031090 organelle membrane No
GO:0016020 membrane No
GO:0042592 homeostatic process No
GO:0008150 biological_process No
GO:0048878 chemical homeostasis No
GO:0065008 regulation of biological quality No
GO:0065007 biological regulation No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 246 268 22
2 352 371 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02921
MDSRTFEGPMDWEYQGRGPLDPTSPFSHAATNSQRSYFGSPAASPARPQNRFANLSTPSKMQQPPPQAARFTPQL
PAKNMAPAFRNPAFSTPRRPIDEIILSEASGAEDSPAGTEASDYPNDTPEADHRADHSGISMMPLKIDKSSRYGR
PKKHAPGKGEIRASRDTSVGMRKRKRRNYDRDVGSVHRHYDGRDSDVLDSGSDSDNETGARLNRSRSAQDGNPGA
FESFFRALNKYPNTPDHMQRWMQFGANLFLVSVLAFLGWSVVSTVRSDIHKANDVARQELVSRMTECQTQYTMNE
CSKKDRPALRIMCDEWYDCMMQNPESILRVKVTAKQVAEIINEFSETMHLKAWGIVLAFILVCTTVNVGALSRQG
GHRPIAPAVAPQPSSAVVDADAAKSPGIAPGYMLVPVHTPRVSRRAQLDEGTDTDTSPLNLKAALPRVTPAGRRS
PSKEERLLSPVKNRAAHR*
Coding >Ophcf2|02921
ATGGATTCAAGGACGTTTGAAGGTCCTATGGACTGGGAGTATCAAGGAAGAGGACCGCTTGATCCTACAAGCCCA
TTTTCGCATGCTGCAACGAACTCGCAGCGAAGCTACTTTGGATCTCCTGCAGCCTCTCCAGCGCGCCCTCAAAAC
CGATTTGCCAACCTCTCGACGCCGTCCAAGATGCAGCAACCACCGCCGCAGGCAGCCCGCTTCACGCCCCAACTT
CCTGCGAAGAACATGGCACCGGCCTTTCGAAACCCAGCATTCTCGACGCCAAGGCGGCCAATCGACGAAATTATC
TTGTCAGAGGCATCGGGCGCCGAGGACAGCCCTGCGGGTACGGAAGCGTCCGACTATCCCAACGATACGCCCGAG
GCGGACCACCGGGCAGACCACAGCGGCATCTCGATGATGCCGCTCAAGATCGACAAGTCTAGCCGCTACGGAAGA
CCCAAGAAACACGCGCCGGGAAAGGGGGAGATACGGGCTAGCAGAGATACCTCTGTCGGGATGAGGAAACGCAAA
CGGCGCAATTACGACAGAGATGTCGGCTCCGTCCACCGTCACTATGACGGACGCGATAGCGACGTCTTGGATTCG
GGCTCCGACTCGGACAATGAAACGGGCGCGCGGCTCAATCGATCACGTTCAGCCCAAGACGGGAATCCAGGCGCG
TTCGAGTCTTTCTTCCGAGCTCTCAACAAGTACCCAAACACGCCGGATCACATGCAGCGATGGATGCAGTTCGGC
GCCAACCTGTTCCTCGTCTCAGTGCTGGCATTTCTCGGCTGGTCCGTGGTGAGCACCGTCCGCAGCGACATCCAC
AAGGCCAACGACGTGGCGCGACAGGAGCTCGTCAGCAGGATGACGGAGTGTCAGACGCAATATACGATGAACGAA
TGCTCCAAGAAGGACCGACCGGCTCTCCGAATTATGTGTGACGAGTGGTACGACTGCATGATGCAGAACCCCGAG
TCGATCCTCAGAGTAAAGGTCACGGCGAAGCAGGTGGCGGAGATTATCAACGAGTTCTCCGAAACGATGCATCTC
AAGGCCTGGGGGATCGTGCTGGCATTCATCCTGGTATGCACTACGGTCAACGTCGGGGCGCTCAGTCGGCAAGGC
GGGCACAGACCGATCGCTCCGGCAGTAGCTCCTCAGCCGAGCAGCGCTGTGGTGGACGCCGACGCTGCGAAATCG
CCCGGCATCGCCCCCGGATACATGCTGGTTCCGGTGCATACGCCGAGAGTATCGCGTCGGGCACAGCTGGACGAG
GGGACGGACACGGACACCTCGCCGCTCAACCTGAAGGCGGCCCTTCCTCGCGTCACGCCTGCTGGGCGCAGGAGC
CCCAGCAAAGAGGAGAGACTGCTCAGTCCGGTGAAGAATAGAGCGGCGCACCGGTAA
Transcript >Ophcf2|02921
ATGGATTCAAGGACGTTTGAAGGTCCTATGGACTGGGAGTATCAAGGAAGAGGACCGCTTGATCCTACAAGCCCA
TTTTCGCATGCTGCAACGAACTCGCAGCGAAGCTACTTTGGATCTCCTGCAGCCTCTCCAGCGCGCCCTCAAAAC
CGATTTGCCAACCTCTCGACGCCGTCCAAGATGCAGCAACCACCGCCGCAGGCAGCCCGCTTCACGCCCCAACTT
CCTGCGAAGAACATGGCACCGGCCTTTCGAAACCCAGCATTCTCGACGCCAAGGCGGCCAATCGACGAAATTATC
TTGTCAGAGGCATCGGGCGCCGAGGACAGCCCTGCGGGTACGGAAGCGTCCGACTATCCCAACGATACGCCCGAG
GCGGACCACCGGGCAGACCACAGCGGCATCTCGATGATGCCGCTCAAGATCGACAAGTCTAGCCGCTACGGAAGA
CCCAAGAAACACGCGCCGGGAAAGGGGGAGATACGGGCTAGCAGAGATACCTCTGTCGGGATGAGGAAACGCAAA
CGGCGCAATTACGACAGAGATGTCGGCTCCGTCCACCGTCACTATGACGGACGCGATAGCGACGTCTTGGATTCG
GGCTCCGACTCGGACAATGAAACGGGCGCGCGGCTCAATCGATCACGTTCAGCCCAAGACGGGAATCCAGGCGCG
TTCGAGTCTTTCTTCCGAGCTCTCAACAAGTACCCAAACACGCCGGATCACATGCAGCGATGGATGCAGTTCGGC
GCCAACCTGTTCCTCGTCTCAGTGCTGGCATTTCTCGGCTGGTCCGTGGTGAGCACCGTCCGCAGCGACATCCAC
AAGGCCAACGACGTGGCGCGACAGGAGCTCGTCAGCAGGATGACGGAGTGTCAGACGCAATATACGATGAACGAA
TGCTCCAAGAAGGACCGACCGGCTCTCCGAATTATGTGTGACGAGTGGTACGACTGCATGATGCAGAACCCCGAG
TCGATCCTCAGAGTAAAGGTCACGGCGAAGCAGGTGGCGGAGATTATCAACGAGTTCTCCGAAACGATGCATCTC
AAGGCCTGGGGGATCGTGCTGGCATTCATCCTGGTATGCACTACGGTCAACGTCGGGGCGCTCAGTCGGCAAGGC
GGGCACAGACCGATCGCTCCGGCAGTAGCTCCTCAGCCGAGCAGCGCTGTGGTGGACGCCGACGCTGCGAAATCG
CCCGGCATCGCCCCCGGATACATGCTGGTTCCGGTGCATACGCCGAGAGTATCGCGTCGGGCACAGCTGGACGAG
GGGACGGACACGGACACCTCGCCGCTCAACCTGAAGGCGGCCCTTCCTCGCGTCACGCCTGCTGGGCGCAGGAGC
CCCAGCAAAGAGGAGAGACTGCTCAGTCCGGTGAAGAATAGAGCGGCGCACCGGTAA
Gene >Ophcf2|02921
ATGGATTCAAGGACGTTTGAAGGTCCTATGGACTGGGAGTATCAAGGAAGAGGACCGCTTGATCCTACAAGCCCA
TTTTCGCATGCTGCAACGAACTCGCAGCGAAGCTGTGAGCTACCCACCATCCACCCGTCTGCAACCCGAGGATCA
CGGGCCATGCTGGCCCCTGAGGACATGGCCTCTACCGTCGTGTCGGCGACTGACAAGCACTCTCAAGACTTTGGA
TCTCCTGCAGCCTCTCCAGCGCGCCCTCAAAACCGATTTGCCAACCTCTCGACGCCGTCCAAGATGCAGCAACCA
CCGCCGCAGGCAGCCCGCTTCACGCCCCAACTTCCTGCGAAGAACATGGCACCGGCCTTTCGAAACCCAGCATTC
TCGACGCCAAGGCGGCCAATCGACGAAATTATCTTGTCAGAGGCATCGGGCGCCGAGGACAGCCCTGCGGGTACG
GAAGCGTCCGACTATCCCAACGATACGCCCGAGGCGGACCACCGGGCAGACCACAGCGGCATCTCGATGATGCCG
CTCAAGATCGACAAGTCTAGCCGCTACGGAAGACCCAAGAAACACGCGCCGGGAAAGGGGGAGATACGGGCTAGC
AGAGATACCTCTGTCGGGATGAGGAAACGCAAACGGCGCAATTACGACAGAGATGTCGGCTCCGTCCACCGTCAC
TATGACGGACGCGATAGCGACGTCTTGGATTCGGGCTCCGACTCGGACAATGAAACGGGCGCGCGGCTCAATCGA
TCACGTTCAGCCCAAGACGGGAATCCAGGCGCGTTCGAGTCTTTCTTCCGAGCTCTCAACAAGTACCCAAACACG
CCGGATCACATGCAGCGATGGATGCAGTTCGGCGCCAACCTGTTCCTCGTCTCAGTGCTGGCATTTCTCGGCTGG
TCCGTGGTGAGCACCGTCCGCAGCGACATCCACAAGGCCAACGACGTGGCGCGACAGGAGCTCGTCAGCAGGATG
ACGGAGTGTCAGACGCAATATACGATGAACGAATGCTCCAAGAAGGACCGACCGGCTCTCCGAATTATGTGTGAC
GAGTGGTACGACTGCATGATGCAGAACCCCGAGTCGATCCTCAGAGTAAAGGTCACGGCGAAGCAGGTGGCGGAG
ATTATCAACGAGTTCTCCGAAACGATGCATCTCAAGGCCTGGGTAAGTGATTCCTCACCATTGCGCGCGTACAGG
CTTACCAACACTTTGCTGCCAGGGGATCGTGCTGGCATTCATCCTGGTATGCACTACGGTCAACGTCGGGGCGCT
CAGTCGGCAAGGCGGGCACAGACCGATCGCTCCGGCAGTAGCTCCTCAGCCGAGCAGCGCTGTGGTGGACGCCGA
CGCTGCGAAATCGCCCGGCATCGCCCCCGGATACATGCTGGTTCCGGTGCATACGCCGAGAGTATCGCGTCGGGC
ACAGCTGGACGAGGGGACGGACACGGACACCTCGCCGCTCAACCTGAAGGCGGCCCTTCCTCGCGTCACGCCTGC
TGGGCGCAGGAGCCCCAGCAAAGAGGAGAGACTGCTCAGTCCGGTGAAGAATAGAGCGGCGCACCGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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