Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02902
Gene name
Locationscaffold_02:5069562..5070648
Strand+
Gene length (bp)1086
Transcript length (bp)1086
Coding sequence length (bp)1086
Protein length (aa) 362

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05546 She9_MDM33 She9 / Mdm33 family 6.4E-81 59 254

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 206 228 22
2 336 358 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02902
MPLFGRRVVRASCLPHSSSIWLPRTRLAHSSTSPGDAKSASAAASELPSAMEDRRGALNRKLSSVMDDLQSRMLT
ASHTLNDITGYSAIEAIKTENQNLEEQLAKAQEHVRTARLAYRSSNTKRSATQREVTTLLARKDSWLPVDLERFT
ELYRTDHVLEGEVTAAQEALTEAEADEQRLSQRLNAGILKRYHEEQIWSDRIRRASTWGTWGLMGMNFVLFVALQ
FVAEPWRRRRLVRGVVEEEKGVLREVRDELGAVKRELSRMTESEARLPVEDVVKESVGSREVTPPPPPPPPPPST
TTVGWRDVMLHPSRWRAAAADLYSERRLDLRMRDASMIAAEGALAGAAVAGGLALALTRRT*
Coding >Ophcf2|02902
ATGCCGTTATTTGGCCGCCGCGTTGTGCGGGCCTCCTGTCTTCCGCACAGCTCCTCGATATGGCTCCCTCGAACG
CGACTGGCTCACTCCTCGACGTCGCCCGGGGATGCCAAATCCGCCTCGGCCGCGGCGTCCGAGCTGCCGTCGGCC
ATGGAGGACCGGCGAGGCGCGCTCAATCGGAAGCTCAGCAGTGTCATGGACGACCTACAATCACGGATGCTCACG
GCGTCTCACACGCTCAATGACATCACGGGATACTCGGCCATCGAGGCCATCAAGACAGAAAACCAAAATCTCGAG
GAGCAGTTGGCAAAAGCGCAGGAACACGTGCGTACGGCACGGCTGGCCTACCGCTCGTCCAACACGAAGCGTTCT
GCGACGCAGCGCGAGGTGACGACGCTCCTGGCGCGCAAGGACAGCTGGCTGCCTGTCGATCTGGAACGCTTCACT
GAGCTTTACCGGACGGACCACGTGCTCGAGGGCGAGGTGACGGCCGCGCAGGAGGCACTGACCGAGGCCGAGGCC
GACGAGCAGAGGCTGAGCCAGCGGCTCAACGCCGGCATCCTCAAACGCTACCACGAGGAGCAGATATGGAGCGAC
AGGATACGCAGGGCCAGCACATGGGGCACATGGGGGCTCATGGGCATGAACTTTGTGCTCTTTGTCGCCTTGCAG
TTTGTCGCCGAGCCGTGGCGCAGGCGGAGGCTGGTCAGGGGCGTCGTCGAGGAGGAGAAGGGCGTGCTGCGGGAG
GTGCGCGACGAACTCGGCGCCGTGAAGCGGGAACTGTCGAGGATGACCGAAAGCGAGGCTCGGCTGCCGGTCGAA
GACGTTGTCAAGGAGAGTGTCGGCTCTCGAGAAGTCACACCGCCGCCGCCGCCGCCGCCGCCGCCGCCTTCGACG
ACGACTGTTGGGTGGAGAGATGTGATGCTGCACCCGTCACGATGGAGGGCGGCGGCGGCGGACCTGTACAGCGAG
AGACGGCTGGATCTGCGGATGAGAGACGCGTCGATGATCGCGGCTGAGGGGGCGCTGGCAGGGGCGGCTGTTGCC
GGGGGACTGGCTTTGGCTCTGACTCGGCGGACTTGA
Transcript >Ophcf2|02902
ATGCCGTTATTTGGCCGCCGCGTTGTGCGGGCCTCCTGTCTTCCGCACAGCTCCTCGATATGGCTCCCTCGAACG
CGACTGGCTCACTCCTCGACGTCGCCCGGGGATGCCAAATCCGCCTCGGCCGCGGCGTCCGAGCTGCCGTCGGCC
ATGGAGGACCGGCGAGGCGCGCTCAATCGGAAGCTCAGCAGTGTCATGGACGACCTACAATCACGGATGCTCACG
GCGTCTCACACGCTCAATGACATCACGGGATACTCGGCCATCGAGGCCATCAAGACAGAAAACCAAAATCTCGAG
GAGCAGTTGGCAAAAGCGCAGGAACACGTGCGTACGGCACGGCTGGCCTACCGCTCGTCCAACACGAAGCGTTCT
GCGACGCAGCGCGAGGTGACGACGCTCCTGGCGCGCAAGGACAGCTGGCTGCCTGTCGATCTGGAACGCTTCACT
GAGCTTTACCGGACGGACCACGTGCTCGAGGGCGAGGTGACGGCCGCGCAGGAGGCACTGACCGAGGCCGAGGCC
GACGAGCAGAGGCTGAGCCAGCGGCTCAACGCCGGCATCCTCAAACGCTACCACGAGGAGCAGATATGGAGCGAC
AGGATACGCAGGGCCAGCACATGGGGCACATGGGGGCTCATGGGCATGAACTTTGTGCTCTTTGTCGCCTTGCAG
TTTGTCGCCGAGCCGTGGCGCAGGCGGAGGCTGGTCAGGGGCGTCGTCGAGGAGGAGAAGGGCGTGCTGCGGGAG
GTGCGCGACGAACTCGGCGCCGTGAAGCGGGAACTGTCGAGGATGACCGAAAGCGAGGCTCGGCTGCCGGTCGAA
GACGTTGTCAAGGAGAGTGTCGGCTCTCGAGAAGTCACACCGCCGCCGCCGCCGCCGCCGCCGCCGCCTTCGACG
ACGACTGTTGGGTGGAGAGATGTGATGCTGCACCCGTCACGATGGAGGGCGGCGGCGGCGGACCTGTACAGCGAG
AGACGGCTGGATCTGCGGATGAGAGACGCGTCGATGATCGCGGCTGAGGGGGCGCTGGCAGGGGCGGCTGTTGCC
GGGGGACTGGCTTTGGCTCTGACTCGGCGGACTTGA
Gene >Ophcf2|02902
ATGCCGTTATTTGGCCGCCGCGTTGTGCGGGCCTCCTGTCTTCCGCACAGCTCCTCGATATGGCTCCCTCGAACG
CGACTGGCTCACTCCTCGACGTCGCCCGGGGATGCCAAATCCGCCTCGGCCGCGGCGTCCGAGCTGCCGTCGGCC
ATGGAGGACCGGCGAGGCGCGCTCAATCGGAAGCTCAGCAGTGTCATGGACGACCTACAATCACGGATGCTCACG
GCGTCTCACACGCTCAATGACATCACGGGATACTCGGCCATCGAGGCCATCAAGACAGAAAACCAAAATCTCGAG
GAGCAGTTGGCAAAAGCGCAGGAACACGTGCGTACGGCACGGCTGGCCTACCGCTCGTCCAACACGAAGCGTTCT
GCGACGCAGCGCGAGGTGACGACGCTCCTGGCGCGCAAGGACAGCTGGCTGCCTGTCGATCTGGAACGCTTCACT
GAGCTTTACCGGACGGACCACGTGCTCGAGGGCGAGGTGACGGCCGCGCAGGAGGCACTGACCGAGGCCGAGGCC
GACGAGCAGAGGCTGAGCCAGCGGCTCAACGCCGGCATCCTCAAACGCTACCACGAGGAGCAGATATGGAGCGAC
AGGATACGCAGGGCCAGCACATGGGGCACATGGGGGCTCATGGGCATGAACTTTGTGCTCTTTGTCGCCTTGCAG
TTTGTCGCCGAGCCGTGGCGCAGGCGGAGGCTGGTCAGGGGCGTCGTCGAGGAGGAGAAGGGCGTGCTGCGGGAG
GTGCGCGACGAACTCGGCGCCGTGAAGCGGGAACTGTCGAGGATGACCGAAAGCGAGGCTCGGCTGCCGGTCGAA
GACGTTGTCAAGGAGAGTGTCGGCTCTCGAGAAGTCACACCGCCGCCGCCGCCGCCGCCGCCGCCGCCTTCGACG
ACGACTGTTGGGTGGAGAGATGTGATGCTGCACCCGTCACGATGGAGGGCGGCGGCGGCGGACCTGTACAGCGAG
AGACGGCTGGATCTGCGGATGAGAGACGCGTCGATGATCGCGGCTGAGGGGGCGCTGGCAGGGGCGGCTGTTGCC
GGGGGACTGGCTTTGGCTCTGACTCGGCGGACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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