© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|02892 |
| Gene name | |
| Location | scaffold_02:5047318..5049588 |
| Strand | - |
| Gene length (bp) | 2270 |
| Transcript length (bp) | 1884 |
| Coding sequence length (bp) | 1884 |
| Protein length (aa) | 628 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04922 | DIE2_ALG10 | DIE2/ALG10 family | 2.4E-127 | 37 | 547 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | Yes |
| GO:0106073 | dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity | Yes |
| GO:0016758 | hexosyltransferase activity | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | No |
| GO:0009987 | cellular process | No |
| GO:0008152 | metabolic process | No |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0016740 | transferase activity | No |
| GO:0009058 | biosynthetic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:1901137 | carbohydrate derivative biosynthetic process | No |
| GO:0046527 | glucosyltransferase activity | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0016757 | glycosyltransferase activity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.0632 | 0.2429 | 0.0195 | 0.2269 | 0.1627 | 0.0463 | 0.8461 | 0.1326 | 0.4269 | 0.0075 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 99 | 116 | 17 |
| 2 | 150 | 172 | 22 |
| 3 | 289 | 311 | 22 |
| 4 | 321 | 343 | 22 |
| 5 | 399 | 421 | 22 |
| 6 | 441 | 463 | 22 |
| 7 | 582 | 604 | 22 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GT59 | 4.0E-132 | 36 | 547 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 40.98 | 23.16 | 58.81 |
| Alive | In ants, during behavior modification | 14.35 | 5.98 | 22.72 |
| Dead | In ants, recently dead | 18.35 | 9.19 | 27.52 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.000238 | yes |
| Alive | Dead | 0.241048 | no |
| Dead | Fungus | 0.000238 | yes |
| Orthofinder run ID | 4 |
| Orthogroup | 5667 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|02892 MNYQALGPAIDSPRMDLVPSVAAASACLWLGIVSKAVPEPYMDEVFHIPQAQRYCHGRFTEWDDKITTPPGLYLL SNVLPQTLRAFGLSWNRSCEPNALRAFNVVGLAVLAYLFLVCRRRMEARATSATEQPLTGFAIHSACNVALFPLL FFFSGLYYTDVVSTVVVLAALVNHLDRVARDRSSIQSDLSTIFLGSMALLMRQTNVFWVVVYMGGLEAVQAVKGL KAESQSLSATKDRPQRLLQMIREYSVGYVHDPLLHMSEIDDTPLVAFSLGVAALCNPFRILRQIWPYLTVLGAFV AFVAWNGAVVLGDKSNHVATIHFAQLLYMWPLLAFFSWPLLLPETPKLAAAMREFLMSCFTARQALGATATPEEQ SSRRLETSPQAENLRSLLRVTYSLVAVFLCCAIVRYNTIIHPFTLADNRHYMFYAFRYSIGRASWIRYLLVGPYL LSCELVMSAMAGYGNKECQSPGRMIRDLGSKEPNTTEHAKKKRQPGESSQTGSSRHSPLRPCASTALIWLLATAL SLVTTPLVEPRYFIVPWVLWRLQVPEWRLCGDDGGVEDGRPAFCCGIAGELFRRQDIRLVIETAWFAVVNLATCY IFIVKPFERRDEAGAVLDGGRLQRFMW* |
| Coding | >Ophcf2|02892 ATGAACTACCAAGCTCTAGGACCCGCCATTGACTCGCCTCGGATGGACCTCGTGCCGTCCGTGGCAGCCGCCAGC GCGTGTCTGTGGCTTGGCATCGTTTCCAAGGCCGTTCCTGAGCCCTACATGGACGAGGTGTTTCACATACCGCAG GCTCAGAGATACTGCCATGGAAGGTTCACAGAGTGGGACGATAAGATCACGACGCCTCCTGGCCTCTATCTACTG TCCAACGTGCTCCCTCAGACTCTCAGAGCGTTCGGACTGAGCTGGAATCGCAGCTGTGAGCCAAATGCTCTTCGG GCTTTCAACGTCGTCGGCTTGGCCGTGCTGGCCTACCTCTTTCTGGTCTGCCGACGCCGGATGGAAGCACGCGCC ACGTCCGCAACGGAGCAGCCTTTGACAGGATTCGCCATTCATTCGGCGTGCAATGTTGCCTTGTTCCCATTGCTA TTCTTCTTCTCGGGTCTCTACTACACCGATGTCGTTTCTACAGTCGTCGTGCTCGCTGCGCTTGTCAATCATCTC GACCGCGTGGCTCGCGACCGCAGCTCCATTCAGAGTGACCTGTCTACCATATTTCTGGGGTCGATGGCCTTGCTC ATGCGGCAGACGAACGTGTTCTGGGTGGTCGTCTACATGGGGGGCCTAGAAGCTGTTCAGGCCGTCAAGGGTCTG AAAGCAGAGTCCCAGAGTCTGTCAGCCACGAAGGATCGTCCGCAACGACTTTTGCAAATGATTCGGGAGTACTCT GTCGGCTACGTTCACGATCCGCTCCTTCACATGTCCGAGATAGACGATACACCCCTCGTGGCGTTCAGTCTCGGT GTTGCCGCCCTGTGCAATCCTTTCCGGATCTTGAGGCAGATATGGCCCTACCTGACGGTTCTCGGAGCCTTTGTC GCCTTTGTCGCCTGGAACGGAGCCGTCGTTCTCGGCGACAAGTCAAACCACGTGGCCACGATTCACTTTGCTCAG CTACTATACATGTGGCCATTGCTTGCCTTTTTCTCGTGGCCGTTGTTGTTGCCGGAGACTCCGAAGTTAGCCGCT GCCATGAGAGAGTTTTTAATGTCATGTTTTACTGCACGGCAGGCTTTAGGCGCAACAGCTACGCCTGAAGAACAG TCATCTAGAAGGCTGGAAACATCACCCCAGGCCGAAAATCTGCGGAGCCTCCTTCGGGTAACCTACTCTCTGGTC GCAGTATTCCTGTGTTGCGCCATAGTGCGGTACAACACCATCATCCATCCATTCACACTGGCCGATAACCGGCAC TACATGTTTTACGCCTTTCGTTATTCGATCGGCCGCGCTTCATGGATCAGGTACTTGCTCGTCGGACCATATCTG TTGAGCTGTGAACTGGTCATGAGTGCCATGGCAGGATACGGGAACAAAGAGTGCCAGAGCCCGGGCCGAATGATC CGTGACTTGGGATCTAAGGAGCCTAATACCACCGAGCACGCCAAGAAGAAGCGGCAGCCTGGCGAGTCCTCGCAG ACCGGTTCGTCTCGACACTCGCCGCTTCGGCCGTGTGCGTCCACAGCGCTCATCTGGCTCTTGGCTACGGCTCTC TCCTTGGTGACGACGCCCTTGGTGGAGCCACGGTACTTTATCGTGCCTTGGGTGTTGTGGCGGCTGCAGGTTCCT GAATGGCGACTTTGCGGCGATGACGGCGGCGTGGAGGATGGTCGTCCTGCGTTTTGCTGCGGCATAGCAGGCGAG CTATTTCGAAGGCAAGATATCAGGCTCGTTATCGAGACGGCCTGGTTTGCCGTTGTCAACTTGGCGACTTGCTAC ATCTTCATCGTCAAGCCCTTTGAGCGGAGAGATGAAGCCGGGGCCGTACTGGATGGCGGTCGACTGCAGCGGTTC ATGTGGTAG |
| Transcript | >Ophcf2|02892 ATGAACTACCAAGCTCTAGGACCCGCCATTGACTCGCCTCGGATGGACCTCGTGCCGTCCGTGGCAGCCGCCAGC GCGTGTCTGTGGCTTGGCATCGTTTCCAAGGCCGTTCCTGAGCCCTACATGGACGAGGTGTTTCACATACCGCAG GCTCAGAGATACTGCCATGGAAGGTTCACAGAGTGGGACGATAAGATCACGACGCCTCCTGGCCTCTATCTACTG TCCAACGTGCTCCCTCAGACTCTCAGAGCGTTCGGACTGAGCTGGAATCGCAGCTGTGAGCCAAATGCTCTTCGG GCTTTCAACGTCGTCGGCTTGGCCGTGCTGGCCTACCTCTTTCTGGTCTGCCGACGCCGGATGGAAGCACGCGCC ACGTCCGCAACGGAGCAGCCTTTGACAGGATTCGCCATTCATTCGGCGTGCAATGTTGCCTTGTTCCCATTGCTA TTCTTCTTCTCGGGTCTCTACTACACCGATGTCGTTTCTACAGTCGTCGTGCTCGCTGCGCTTGTCAATCATCTC GACCGCGTGGCTCGCGACCGCAGCTCCATTCAGAGTGACCTGTCTACCATATTTCTGGGGTCGATGGCCTTGCTC ATGCGGCAGACGAACGTGTTCTGGGTGGTCGTCTACATGGGGGGCCTAGAAGCTGTTCAGGCCGTCAAGGGTCTG AAAGCAGAGTCCCAGAGTCTGTCAGCCACGAAGGATCGTCCGCAACGACTTTTGCAAATGATTCGGGAGTACTCT GTCGGCTACGTTCACGATCCGCTCCTTCACATGTCCGAGATAGACGATACACCCCTCGTGGCGTTCAGTCTCGGT GTTGCCGCCCTGTGCAATCCTTTCCGGATCTTGAGGCAGATATGGCCCTACCTGACGGTTCTCGGAGCCTTTGTC GCCTTTGTCGCCTGGAACGGAGCCGTCGTTCTCGGCGACAAGTCAAACCACGTGGCCACGATTCACTTTGCTCAG CTACTATACATGTGGCCATTGCTTGCCTTTTTCTCGTGGCCGTTGTTGTTGCCGGAGACTCCGAAGTTAGCCGCT GCCATGAGAGAGTTTTTAATGTCATGTTTTACTGCACGGCAGGCTTTAGGCGCAACAGCTACGCCTGAAGAACAG TCATCTAGAAGGCTGGAAACATCACCCCAGGCCGAAAATCTGCGGAGCCTCCTTCGGGTAACCTACTCTCTGGTC GCAGTATTCCTGTGTTGCGCCATAGTGCGGTACAACACCATCATCCATCCATTCACACTGGCCGATAACCGGCAC TACATGTTTTACGCCTTTCGTTATTCGATCGGCCGCGCTTCATGGATCAGGTACTTGCTCGTCGGACCATATCTG TTGAGCTGTGAACTGGTCATGAGTGCCATGGCAGGATACGGGAACAAAGAGTGCCAGAGCCCGGGCCGAATGATC CGTGACTTGGGATCTAAGGAGCCTAATACCACCGAGCACGCCAAGAAGAAGCGGCAGCCTGGCGAGTCCTCGCAG ACCGGTTCGTCTCGACACTCGCCGCTTCGGCCGTGTGCGTCCACAGCGCTCATCTGGCTCTTGGCTACGGCTCTC TCCTTGGTGACGACGCCCTTGGTGGAGCCACGGTACTTTATCGTGCCTTGGGTGTTGTGGCGGCTGCAGGTTCCT GAATGGCGACTTTGCGGCGATGACGGCGGCGTGGAGGATGGTCGTCCTGCGTTTTGCTGCGGCATAGCAGGCGAG CTATTTCGAAGGCAAGATATCAGGCTCGTTATCGAGACGGCCTGGTTTGCCGTTGTCAACTTGGCGACTTGCTAC ATCTTCATCGTCAAGCCCTTTGAGCGGAGAGATGAAGCCGGGGCCGTACTGGATGGCGGTCGACTGCAGCGGTTC ATGTGGTAG |
| Gene | >Ophcf2|02892 ATGGTAACGCCTATCTTTCTACGGTCGCTTCTAATGTACAAATGTCTGCAATACTGATAATTGACTTGAATGATC TGCTACGAAGAACTACCAAGCTCTAGGGTAGCCACCTTTTCTTCAAAGACTTGAAACACCTCACAGGAACCCCAT CTTCTCAACCGTCAAACACTACCTATTCCCGCAGCTAAATTCAGTCAGACCCGCCATTGACTCGCCTCGGATGGA CCTCGTGCCGTCCGTGGCAGCCGCCAGCGCGTGTCTGTGGCTTGGCATCGTTTCCAAGGCCGTTCCTGAGCCCTA CATGGTTGGTGGCTGACCATCTCTGCTGGGTAAGTGATGACAGGCTGACAGTAGCTCAGGACGAGGTGTTTCACA TACCGCAGGCTCAGAGATACTGCCATGGAAGGTTCACAGAGTGGGACGATAAGATCACGACGCCTCCTGGCCTGT GAGTTCATCGATGCTAAGGGAAACGAGATGCTGGCTGCTGACGCGAGCAGCTATCTACTGTCCAACGTGCTCCCT CAGACTCTCAGAGCGTTCGGACTGAGCTGGAATCGCAGCTGTGAGCCAAATGCTCTTCGGGCTTTCAACGTCGTC GGCTTGGCCGTGCTGGCCTACCTCTTTCTGGTCTGCCGACGCCGGATGGAAGCACGCGCCACGTCCGCAACGGAG CAGCCTTTGACAGGATTCGCCATTCATTCGGCGTGCAATGTTGCCTTGTTCCCATTGCTATTCTTCTTCTCGGGT CTCTACTACACCGATGTCGTTTCTACAGTCGTCGTGCTCGCTGCGCTTGTCAATCATCTCGACCGCGTGGCTCGC GACCGCAGCTCCATTCAGAGTGACCTGTCTACCATATTTCTGGGGTCGATGGCCTTGCTCATGCGGCAGACGAAC GTGTTCTGGGTGGTCGTCTACATGGGGGGCCTAGAAGCTGTTCAGGCCGTCAAGGGTCTGAAAGCAGAGTCCCAG AGTCTGTCAGCCACGAAGGATCGTCCGCAACGACTTTTGCAAATGATTCGGGAGTACTCTGTCGGCTACGTTCAC GATCCGCTCCTTCACATGTCCGAGATAGACGGTAAGCGCTGAGACCGTTCGGTCTTATTTTCATGGCTGCTTAGT CCGATGACAGATACACCCCTCGTGGCGTTCAGTCTCGGTGTTGCCGCCCTGTGCAATCCTTTCCGGATCTTGAGG CAGATATGGCCCTACCTGACGGTTCTCGGAGCCTTTGTCGCCTTTGTCGCCTGGAACGGAGCCGTCGTTCTCGGT AAGCTCCCCATTCTCCCGAGGCACAGCAATCCTGATGAAGTGCAGGCGACAAGTCAAACCACGTGGCCACGATTC ACTTTGCTCAGCTACTATACATGTGGCCATTGCTTGCCTTTTTCTCGTGGCCGTTGTTGTTGCCGGAGACTCCGA AGTTAGCCGCTGCCATGAGAGAGTTTTTAATGTCATGTTTTACTGCACGGCAGGCTTTAGGCGCAACAGCTACGC CTGAAGAACAGTCATCTAGAAGGCTGGAAACATCACCCCAGGCCGAAAATCTGCGGAGCCTCCTTCGGGTAACCT ACTCTCTGGTCGCAGTATTCCTGTGTTGCGCCATAGTGCGGTACAACACCATCATCCATCCATTCACACTGGCCG ATAACCGGCACTACATGTTTTACGCCTTTCGTTATTCGATCGGCCGCGCTTCATGGATCAGGTACTTGCTCGTCG GACCATATCTGTTGAGCTGTGAACTGGTCATGAGTGCCATGGCAGGATACGGGAACAAAGAGTGCCAGAGCCCGG GCCGAATGATCCGTGACTTGGGATCTAAGGAGCCTAATACCACCGAGCACGCCAAGAAGAAGCGGCAGCCTGGCG AGTCCTCGCAGACCGGTTCGTCTCGACACTCGCCGCTTCGGCCGTGTGCGTCCACAGCGCTCATCTGGCTCTTGG CTACGGCTCTCTCCTTGGTGACGACGCCCTTGGTGGAGCCACGGTACTTTATCGTGCCTTGGGTGTTGTGGCGGC TGCAGGTTCCTGAATGGCGACTTTGCGGCGATGACGGCGGCGTGGAGGATGGTCGTCCTGCGTTTTGCTGCGGCA TAGCAGGCGAGCTATTTCGAAGGCAAGATATCAGGCTCGTTATCGAGACGGCCTGGTTTGCCGTTGTCAACTTGG CGACTTGCTACATCTTCATCGTCAAGCCCTTTGAGCGGAGAGATGAAGCCGGGGCCGTACTGGATGGCGGTCGAC TGCAGCGGTTCATGTGGTAG |