Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02890
Gene name
Locationscaffold_02:5041659..5043352
Strand-
Gene length (bp)1693
Transcript length (bp)1521
Coding sequence length (bp)1521
Protein length (aa) 507

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01566 Nramp Natural resistance-associated macrophage protein 5.0E-89 62 447

GO

GO Term Description Terminal node
GO:0030001 metal ion transport Yes
GO:0016020 membrane Yes
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0051234 establishment of localization No
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0006811 ion transport No
GO:0006810 transport No
GO:0008150 biological_process No
GO:0006812 cation transport No
GO:0015075 ion transmembrane transporter activity No
GO:0051179 localization No
GO:0022857 transmembrane transporter activity No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0008324 cation transmembrane transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 57 0.45

Transmembrane Domains

Domain # Start End Length
1 40 57 17
2 72 94 22
3 115 137 22
4 147 169 22
5 182 204 22
6 228 250 22
7 302 324 22
8 350 372 22
9 393 411 18
10 421 440 19
11 479 501 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02890
MCTVMVRNPELEEEAEAVAGGRGTEPADTWARRTRRRAGAFGRFVGPGFMVSVAYIDPGNYATDVAAGASQRFAL
LFVVLASNLAAILLQSLAARLGTVTGLDLAAMCRARLPRWLNLSLYVLAEVAIVATDLAEVMGTAVALNLLFPGL
PLVAGCAIAVVDVMAVLVFYRPQGAMRGLRTFEALVSLLVIGVVVCFALQLYMLRGRSSVGDVFRGYLPSSVLVQ
PQALYQACGILGATVMPHGLYLGSGIVQPRLREYDAANGLLPRGPEPEADDGDGVKTAYVPSLTAVRHALVYTVA
ELALLLCTLALFVNSAILIVAGISLYGTSGAANADLFGIHDLLSRVVSPVAGTIFALALLLSGVSAGIVCTIAGQ
MVCEGALNWRVRPWLRRLITRSISVVPALLIAAAVGRRGLATALNASQVVLSVVLPFISLPLIYFTSRSRFMTVE
PGAARYVRDVDDRVRGGDAGVDLSNSWCIIVISVIAWLVIAVMNVANVVLLAMGKS*
Coding >Ophcf2|02890
ATGTGTACCGTCATGGTGCGGAATCCCGAGTTGGAAGAGGAGGCGGAAGCGGTTGCGGGAGGGCGCGGCACGGAG
CCGGCGGACACGTGGGCCCGGAGGACGCGGCGGCGGGCGGGGGCTTTTGGCCGGTTCGTGGGGCCGGGGTTCATG
GTTTCGGTGGCGTACATCGATCCCGGAAACTACGCGACCGACGTGGCAGCTGGTGCCTCGCAGCGCTTCGCCCTC
CTCTTCGTCGTCCTGGCCAGCAACTTGGCTGCTATCCTGCTGCAGTCGCTAGCCGCCCGGCTGGGGACCGTTACG
GGGCTCGACCTGGCGGCCATGTGCCGAGCCCGACTCCCGCGTTGGCTGAACCTATCGCTGTACGTGCTGGCCGAG
GTGGCCATCGTGGCGACGGACCTGGCCGAGGTCATGGGTACGGCCGTGGCGTTGAACCTGCTGTTTCCCGGCCTG
CCCCTGGTTGCGGGCTGTGCTATTGCTGTCGTCGACGTCATGGCTGTCTTGGTGTTTTATCGGCCTCAGGGCGCT
ATGCGTGGCCTGCGCACTTTTGAGGCACTTGTGAGCTTGCTTGTCATTGGCGTCGTTGTCTGCTTTGCGCTACAG
CTGTACATGTTGAGGGGACGAAGCAGTGTTGGCGATGTCTTTCGTGGCTATCTACCTTCTTCCGTCCTCGTTCAG
CCTCAGGCACTCTACCAGGCTTGTGGCATCCTCGGAGCAACCGTCATGCCTCACGGCCTCTACCTCGGATCCGGC
ATCGTCCAGCCACGGCTCCGGGAGTACGATGCTGCCAACGGCCTGCTGCCACGGGGCCCGGAGCCTGAAGCGGAC
GATGGCGATGGCGTAAAGACGGCCTACGTCCCTTCACTGACAGCTGTGAGACACGCCCTCGTGTATACCGTCGCC
GAGCTGGCTCTCCTCCTCTGCACGCTCGCCCTCTTTGTCAACTCTGCCATCCTCATCGTCGCCGGCATCTCGCTC
TACGGCACGTCGGGGGCTGCAAACGCCGACCTCTTTGGCATTCATGACCTGCTTTCACGCGTCGTCTCGCCCGTT
GCGGGAACCATCTTTGCACTCGCCTTGCTGCTGTCTGGCGTTTCGGCTGGTATCGTTTGCACAATTGCCGGACAG
ATGGTGTGCGAGGGCGCGCTGAACTGGCGCGTGCGACCTTGGCTTCGGCGACTCATCACGCGGTCCATCAGCGTC
GTGCCGGCGCTGCTCATCGCTGCGGCCGTGGGACGTCGGGGGCTTGCGACTGCTCTCAACGCTTCGCAGGTTGTT
CTCAGCGTTGTTCTACCCTTCATCTCCCTGCCGCTGATCTACTTTACGAGCCGTAGTCGGTTTATGACGGTTGAG
CCGGGGGCTGCGCGCTATGTTAGGGATGTGGATGATCGGGTACGGGGCGGAGACGCGGGCGTGGACTTGTCCAAC
TCGTGGTGTATCATTGTTATCTCTGTCATTGCCTGGCTGGTCATTGCCGTCATGAATGTGGCCAATGTTGTGTTG
TTGGCGATGGGGAAGTCGTAG
Transcript >Ophcf2|02890
ATGTGTACCGTCATGGTGCGGAATCCCGAGTTGGAAGAGGAGGCGGAAGCGGTTGCGGGAGGGCGCGGCACGGAG
CCGGCGGACACGTGGGCCCGGAGGACGCGGCGGCGGGCGGGGGCTTTTGGCCGGTTCGTGGGGCCGGGGTTCATG
GTTTCGGTGGCGTACATCGATCCCGGAAACTACGCGACCGACGTGGCAGCTGGTGCCTCGCAGCGCTTCGCCCTC
CTCTTCGTCGTCCTGGCCAGCAACTTGGCTGCTATCCTGCTGCAGTCGCTAGCCGCCCGGCTGGGGACCGTTACG
GGGCTCGACCTGGCGGCCATGTGCCGAGCCCGACTCCCGCGTTGGCTGAACCTATCGCTGTACGTGCTGGCCGAG
GTGGCCATCGTGGCGACGGACCTGGCCGAGGTCATGGGTACGGCCGTGGCGTTGAACCTGCTGTTTCCCGGCCTG
CCCCTGGTTGCGGGCTGTGCTATTGCTGTCGTCGACGTCATGGCTGTCTTGGTGTTTTATCGGCCTCAGGGCGCT
ATGCGTGGCCTGCGCACTTTTGAGGCACTTGTGAGCTTGCTTGTCATTGGCGTCGTTGTCTGCTTTGCGCTACAG
CTGTACATGTTGAGGGGACGAAGCAGTGTTGGCGATGTCTTTCGTGGCTATCTACCTTCTTCCGTCCTCGTTCAG
CCTCAGGCACTCTACCAGGCTTGTGGCATCCTCGGAGCAACCGTCATGCCTCACGGCCTCTACCTCGGATCCGGC
ATCGTCCAGCCACGGCTCCGGGAGTACGATGCTGCCAACGGCCTGCTGCCACGGGGCCCGGAGCCTGAAGCGGAC
GATGGCGATGGCGTAAAGACGGCCTACGTCCCTTCACTGACAGCTGTGAGACACGCCCTCGTGTATACCGTCGCC
GAGCTGGCTCTCCTCCTCTGCACGCTCGCCCTCTTTGTCAACTCTGCCATCCTCATCGTCGCCGGCATCTCGCTC
TACGGCACGTCGGGGGCTGCAAACGCCGACCTCTTTGGCATTCATGACCTGCTTTCACGCGTCGTCTCGCCCGTT
GCGGGAACCATCTTTGCACTCGCCTTGCTGCTGTCTGGCGTTTCGGCTGGTATCGTTTGCACAATTGCCGGACAG
ATGGTGTGCGAGGGCGCGCTGAACTGGCGCGTGCGACCTTGGCTTCGGCGACTCATCACGCGGTCCATCAGCGTC
GTGCCGGCGCTGCTCATCGCTGCGGCCGTGGGACGTCGGGGGCTTGCGACTGCTCTCAACGCTTCGCAGGTTGTT
CTCAGCGTTGTTCTACCCTTCATCTCCCTGCCGCTGATCTACTTTACGAGCCGTAGTCGGTTTATGACGGTTGAG
CCGGGGGCTGCGCGCTATGTTAGGGATGTGGATGATCGGGTACGGGGCGGAGACGCGGGCGTGGACTTGTCCAAC
TCGTGGTGTATCATTGTTATCTCTGTCATTGCCTGGCTGGTCATTGCCGTCATGAATGTGGCCAATGTTGTGTTG
TTGGCGATGGGGAAGTCGTAG
Gene >Ophcf2|02890
ATGTGTACCGTCATGGTGCGGAATCCCGAGTTGGAAGAGGAGGCGGAAGCGGTTGCGGGAGGGCGCGGCACGGAG
CCGGCGGACACGTGGGCCCGGAGGACGCGGCGGCGGGCGGGGGCTTTTGGCCGGTTCGTGGGGCCGGGGTTCATG
GTTTCGGTGGCGTACAGTGAGTCCCTTTCCGGGGCTCTTTTCCGGGGATCTTGTCCGGGGATCTTGTCCGGGGAT
CGAGACGCTGTGAGACCGGCAGACAGCTTACCCTGGAACAGTCGATCCCGGAAACTACGCGACCGACGTGGCAGC
TGGTGCCTCGCAGCGCTTCGCCCTCCTCTTCGTCGTCCTGGCCAGCAACTTGGCTGCTATCCTGCTGCAGTCGCT
AGCCGCCCGGCTGGGGACCGTTACGGGGCTCGACCTGGCGGCCATGTGCCGAGCCCGACTCCCGCGTTGGCTGAA
CCTATCGCTGTACGTGCTGGCCGAGGTGGCCATCGTGGCGACGGACCTGGCCGAGGTCATGGGTACGGCCGTGGC
GTTGAACCTGCTGTTTCCCGGCCTGCCCCTGGTTGCGGGCTGTGCTATTGCTGTCGTCGACGTCATGGCTGTCTT
GGTGTTTTATCGGCCTCAGGGCGCTATGCGTGGCCTGCGCACTTTTGAGGCACTTGTGAGCTTGCTTGTCATTGG
CGTCGTTGTCTGCTTTGCGCTACAGCTGTACATGTTGAGGGGACGAAGCAGTGTTGGCGATGTCTTTCGTGGCTA
TCTACCTTCTTCCGTCCTCGTTCAGCCTCAGGCGTGCGTATATCTCATCCATCTAAACCTCGTGATCAAGGGAAG
AATGGCAAGACTAACAAACGATGCTGCTAGACTCTACCAGGCTTGTGGCATCCTCGGAGCAACCGTCATGCCTCA
CGGCCTCTACCTCGGATCCGGCATCGTCCAGCCACGGCTCCGGGAGTACGATGCTGCCAACGGCCTGCTGCCACG
GGGCCCGGAGCCTGAAGCGGACGATGGCGATGGCGTAAAGACGGCCTACGTCCCTTCACTGACAGCTGTGAGACA
CGCCCTCGTGTATACCGTCGCCGAGCTGGCTCTCCTCCTCTGCACGCTCGCCCTCTTTGTCAACTCTGCCATCCT
CATCGTCGCCGGCATCTCGCTCTACGGCACGTCGGGGGCTGCAAACGCCGACCTCTTTGGCATTCATGACCTGCT
TTCACGCGTCGTCTCGCCCGTTGCGGGAACCATCTTTGCACTCGCCTTGCTGCTGTCTGGCGTTTCGGCTGGTAT
CGTTTGCACAATTGCCGGACAGATGGTGTGCGAGGGCGCGCTGAACTGGCGCGTGCGACCTTGGCTTCGGCGACT
CATCACGCGGTCCATCAGCGTCGTGCCGGCGCTGCTCATCGCTGCGGCCGTGGGACGTCGGGGGCTTGCGACTGC
TCTCAACGCTTCGCAGGTTGTTCTCAGCGTTGTTCTACCCTTCATCTCCCTGCCGCTGATCTACTTTACGAGCCG
TAGTCGGTTTATGACGGTTGAGCCGGGGGCTGCGCGCTATGTTAGGGATGTGGATGATCGGGTACGGGGCGGAGA
CGCGGGCGTGGACTTGTCCAACTCGTGGTGTATCATTGTTATCTCTGTCATTGCCTGGCTGGTCATTGCCGTCAT
GAATGTGGCCAATGTTGTGTTGTTGGCGATGGGGAAGTCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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