Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02888
Gene name
Locationscaffold_02:5038402..5039561
Strand+
Gene length (bp)1159
Transcript length (bp)1050
Coding sequence length (bp)1050
Protein length (aa) 350

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 230 252 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02888
MQRVEAGDARDLLRRRTRRLRPRNETKKPSRNRRRHLRSSSSGLDSDSDSDSDAPPAKSNFLTSLGGGPSNSGSS
PNVVVIGNPQQNNVPNLLANQGQPAPLNQLAPQRPTNPIQNAAPAPQIPANPIQNAAPVLGTTRIVTQSVLQQQT
TTFLSSILATTTPLANVAPVVNLEQPPSLRTSSTSSSSSTSATQTTATEASQTSDADLKAATPPATEHDPKRDGR
LDGGAEAGIVIGVVAAIVLLSLIFVFFRRYRRKRSSNKFPPTARMMPDISAPIPIHRDSDAMTVSVGYLESVNSR
LSRHLQEPQPVFMAQSGDEEYFQRRVYAEPAPEMAEGASERSHQPTNFI*
Coding >Ophcf2|02888
ATGCAACGTGTGGAAGCTGGCGACGCCAGAGACCTGCTTCGGCGGAGAACCAGACGTCTCCGACCACGCAACGAG
ACCAAAAAACCCTCCAGAAACCGTAGAAGACATCTTCGATCTTCTAGCTCCGGCCTCGACTCCGACTCCGACTCC
GACTCCGACGCACCACCCGCAAAGTCCAACTTCCTCACATCCCTCGGCGGTGGTCCGTCGAACTCAGGGTCGAGT
CCCAACGTGGTAGTCATCGGCAATCCGCAGCAGAACAATGTTCCCAACTTGCTAGCAAATCAGGGACAGCCAGCT
CCCCTGAACCAGCTGGCTCCTCAGAGACCAACCAACCCCATCCAGAACGCGGCGCCCGCTCCTCAGATACCAGCC
AACCCCATCCAGAACGCGGCGCCCGTTCTGGGCACCACCAGAATCGTCACGCAGAGCGTCTTGCAGCAGCAGACG
ACGACGTTCCTCTCATCCATCCTCGCGACTACGACGCCGTTGGCCAACGTGGCGCCCGTCGTGAACCTCGAGCAG
CCCCCTTCCTTGCGCACCTCGAGCACCAGCTCAAGCAGCAGCACCTCGGCAACGCAGACGACAGCGACAGAGGCG
TCCCAAACATCCGATGCTGACCTCAAGGCAGCCACCCCCCCGGCGACAGAACACGATCCAAAGCGGGATGGACGG
TTGGATGGCGGAGCCGAGGCCGGCATAGTAATCGGTGTCGTGGCCGCCATCGTTCTCCTATCCCTGATCTTCGTC
TTCTTCCGCCGCTACCGCCGCAAAAGATCCTCAAACAAGTTCCCGCCCACGGCCAGGATGATGCCCGATATCTCG
GCGCCGATACCGATCCACAGAGACTCGGACGCCATGACGGTCAGCGTCGGCTATCTGGAATCGGTAAACTCACGC
CTATCGAGGCATCTGCAGGAGCCCCAGCCGGTCTTCATGGCGCAGTCCGGTGACGAGGAGTACTTTCAGCGCCGA
GTGTATGCCGAGCCGGCGCCGGAGATGGCGGAGGGGGCGTCGGAGCGGTCGCATCAACCGACAAACTTTATCTAA
Transcript >Ophcf2|02888
ATGCAACGTGTGGAAGCTGGCGACGCCAGAGACCTGCTTCGGCGGAGAACCAGACGTCTCCGACCACGCAACGAG
ACCAAAAAACCCTCCAGAAACCGTAGAAGACATCTTCGATCTTCTAGCTCCGGCCTCGACTCCGACTCCGACTCC
GACTCCGACGCACCACCCGCAAAGTCCAACTTCCTCACATCCCTCGGCGGTGGTCCGTCGAACTCAGGGTCGAGT
CCCAACGTGGTAGTCATCGGCAATCCGCAGCAGAACAATGTTCCCAACTTGCTAGCAAATCAGGGACAGCCAGCT
CCCCTGAACCAGCTGGCTCCTCAGAGACCAACCAACCCCATCCAGAACGCGGCGCCCGCTCCTCAGATACCAGCC
AACCCCATCCAGAACGCGGCGCCCGTTCTGGGCACCACCAGAATCGTCACGCAGAGCGTCTTGCAGCAGCAGACG
ACGACGTTCCTCTCATCCATCCTCGCGACTACGACGCCGTTGGCCAACGTGGCGCCCGTCGTGAACCTCGAGCAG
CCCCCTTCCTTGCGCACCTCGAGCACCAGCTCAAGCAGCAGCACCTCGGCAACGCAGACGACAGCGACAGAGGCG
TCCCAAACATCCGATGCTGACCTCAAGGCAGCCACCCCCCCGGCGACAGAACACGATCCAAAGCGGGATGGACGG
TTGGATGGCGGAGCCGAGGCCGGCATAGTAATCGGTGTCGTGGCCGCCATCGTTCTCCTATCCCTGATCTTCGTC
TTCTTCCGCCGCTACCGCCGCAAAAGATCCTCAAACAAGTTCCCGCCCACGGCCAGGATGATGCCCGATATCTCG
GCGCCGATACCGATCCACAGAGACTCGGACGCCATGACGGTCAGCGTCGGCTATCTGGAATCGGTAAACTCACGC
CTATCGAGGCATCTGCAGGAGCCCCAGCCGGTCTTCATGGCGCAGTCCGGTGACGAGGAGTACTTTCAGCGCCGA
GTGTATGCCGAGCCGGCGCCGGAGATGGCGGAGGGGGCGTCGGAGCGGTCGCATCAACCGACAAACTTTATCTAA
Gene >Ophcf2|02888
ATGCAACGTGTGGAAGCTGGCGACGCCAGGTAAGCCAACAAGGACCTTGAACATGTCCATGTCACTGACCAGAGA
GAAAAGAGACCTGCTTCGGCGGAGAACCAGACGTCTCCGACCACGCAACGAGACCAAAAAACCCTCCAGAAACCG
TAGAAGACATCTTCGATCTTCTAGCTCCGGCCTCGACTCCGACTCCGACTCCGACTCCGACGCACCACCCGCAAA
GTCCAACTTCCTCACATCCCTCGGCGGTGGTCCGTCGAACTCAGGGTCGAGTCCCAACGTGGTAGTCATCGGCAA
TCCGCAGCAGAACAATGTTCCCAACTTGCTAGCAAATCAGGGACAGCCAGCTCCCCTGAACCAGCTGGCTCCTCA
GAGACCAACCAACCCCATCCAGAACGCGGCGCCCGCTCCTCAGATACCAGCCAACCCCATCCAGAACGCGGCGCC
CGTTCTGGGCACCACCAGAATCGTCACGCAGAGCGTCTTGCAGCAGCAGACGACGACGTTCCTCTCATCCATCCT
CGCGACTACGACGCCGTTGGCCAACGTGGCGCCCGTCGTGAACCTCGAGCAGCCCCCTTCCTTGCGCACCTCGAG
CACCAGCTCAAGCAGCAGCACCTCGGCAACGCAGACGACAGCGACAGAGGCGTCCCAAACATCCGATGCTGACCT
CAAGGCAGCCACCCCCCCGGCGACAGAACACGATCCAAAGCGGGATGGACGGTTGGATGGCGGAGCCGAGGCCGG
CATAGTAATCGGTGTCGTGGGTAAGTTCTCGTCGAATTGCTACGATGGCCCTCTTCCAAGCTCACAACGTCTCCC
AGCCGCCATCGTTCTCCTATCCCTGATCTTCGTCTTCTTCCGCCGCTACCGCCGCAAAAGATCCTCAAACAAGTT
CCCGCCCACGGCCAGGATGATGCCCGATATCTCGGCGCCGATACCGATCCACAGAGACTCGGACGCCATGACGGT
CAGCGTCGGCTATCTGGAATCGGTAAACTCACGCCTATCGAGGCATCTGCAGGAGCCCCAGCCGGTCTTCATGGC
GCAGTCCGGTGACGAGGAGTACTTTCAGCGCCGAGTGTATGCCGAGCCGGCGCCGGAGATGGCGGAGGGGGCGTC
GGAGCGGTCGCATCAACCGACAAACTTTATCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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