© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|02881 |
| Gene name | |
| Location | scaffold_02:5009265..5011244 |
| Strand | - |
| Gene length (bp) | 1979 |
| Transcript length (bp) | 1812 |
| Coding sequence length (bp) | 1812 |
| Protein length (aa) | 604 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03901 | Glyco_transf_22 | Alg9-like mannosyltransferase family | 2.8E-88 | 34 | 466 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016757 | glycosyltransferase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 29 | 51 | 22 |
| 2 | 113 | 135 | 22 |
| 3 | 142 | 164 | 22 |
| 4 | 168 | 187 | 19 |
| 5 | 194 | 216 | 22 |
| 6 | 236 | 258 | 22 |
| 7 | 296 | 315 | 19 |
| 8 | 330 | 349 | 19 |
| 9 | 361 | 383 | 22 |
| 10 | 398 | 420 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 76.52 | 43.60 | 109.43 |
| Alive | In ants, during behavior modification | 30.68 | 16.10 | 45.26 |
| Dead | In ants, recently dead | 26.71 | 14.33 | 39.10 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.000238 | yes |
| Alive | Dead | 0.478045 | no |
| Dead | Fungus | 0.000238 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|02881 MAPSQPPAQFEHSVATHAKKKKRYGPYPLEPITVFYFFLAANVVAALWAPIQDCDETFNYWEPTHYLSRGYGLQT WEYSPDYAIRSWLYIALHAVVGTARRILPHSSKVSEFYFVRYALAFVCAICQTILFKAICLSLNARVAVFFILAT ISSPGNFHASTAFLPSSFAMYTAMLGAACFMNWRGGLKTSRGIFWFAVGAILGWPFAAALCAPFVVEEVVLAVFS DGQATFEAFVRLFRGGVAGLLVLLTDFLVNLFFYRKATIVTWNIVKYNIFSSNGGPELYGTEPWHFYLKNLALNF NMWFVLALLALPIFLLQKALSSSGHGFQSGLRTVVFIAPFYMWLAIFTAQPHKEERFMYPLYPFLALNASMSLHM ILSALGRVGPRSLIGRIPGRVKLLGAVLVLLSSLILGLSRIYGVYSAYSAPLRIYQPLWGDARGNNATGRPEDSV CFGKEWYRFPTSYFLPRGMHAKFIRSDFHGLLPGEFSQAKTGFGLWSGTWLPTRGLNNANKEDATTYVDVRACAL LVDTQYPDRAEPPPPSPNEPDYASDEGTWAVVKCEPFLDAAATHLFARALWVPDLAIVPHRLRRKWGRHCLLQRR RNY* |
| Coding | >Ophcf2|02881 ATGGCGCCGTCCCAACCACCAGCGCAGTTCGAGCACTCAGTAGCCACCCATGCCAAGAAAAAGAAGCGGTACGGG CCGTACCCTCTCGAACCCATCACCGTCTTCTACTTCTTCCTCGCTGCCAACGTCGTGGCCGCGTTGTGGGCACCT ATTCAGGACTGCGACGAGACTTTCAACTACTGGGAGCCTACCCACTATCTCTCTCGTGGCTATGGCCTCCAGACT TGGGAGTATTCTCCCGACTACGCCATCCGCAGCTGGCTCTACATCGCCCTGCACGCCGTCGTGGGAACCGCACGC CGGATTCTTCCGCACTCGTCCAAGGTATCCGAGTTCTATTTCGTACGCTACGCACTGGCCTTCGTCTGCGCCATC TGCCAAACGATCCTCTTCAAAGCCATCTGCCTCTCCCTCAACGCCCGCGTCGCCGTCTTCTTCATCCTCGCCACC ATCTCCAGCCCCGGAAACTTCCACGCAAGCACCGCCTTTCTACCCTCGAGCTTCGCCATGTACACGGCCATGCTA GGCGCCGCCTGTTTCATGAATTGGCGCGGCGGGCTCAAGACATCGCGCGGCATCTTCTGGTTTGCCGTTGGCGCC ATTCTCGGCTGGCCCTTTGCCGCCGCTCTTTGCGCGCCTTTTGTCGTTGAGGAGGTTGTCCTGGCTGTCTTTAGC GATGGGCAGGCCACCTTTGAGGCCTTTGTTCGTCTTTTTCGCGGTGGCGTCGCGGGTTTACTTGTTCTGCTCACC GACTTCCTCGTCAACCTCTTCTTTTACCGAAAAGCGACAATCGTCACATGGAACATCGTAAAGTACAACATCTTC TCTTCCAACGGCGGCCCCGAGCTGTACGGCACCGAGCCCTGGCACTTCTACCTCAAGAACCTAGCCCTCAACTTC AACATGTGGTTCGTCCTGGCCCTACTGGCGCTGCCCATTTTCCTCCTCCAAAAAGCCCTCTCGTCATCCGGACAC GGCTTTCAATCCGGATTGCGCACCGTCGTCTTCATCGCCCCTTTTTACATGTGGCTCGCCATCTTTACGGCCCAG CCGCACAAGGAAGAGCGATTCATGTACCCGCTATACCCATTCCTAGCGCTCAACGCGTCCATGTCCCTGCACATG ATCCTATCTGCCTTGGGTCGCGTAGGCCCGAGATCGCTGATAGGCAGGATCCCCGGACGAGTCAAACTCCTCGGC GCAGTACTCGTCCTGCTCTCGTCACTGATTCTCGGACTATCCCGTATCTACGGCGTCTACTCAGCCTACAGCGCC CCCTTACGCATCTACCAACCACTCTGGGGTGACGCCCGAGGCAACAACGCAACCGGCAGACCCGAAGACTCAGTC TGTTTCGGCAAAGAATGGTACCGCTTCCCAACATCCTACTTCCTCCCCCGCGGCATGCACGCCAAATTCATCCGC TCCGACTTCCACGGCCTCCTCCCAGGCGAATTCTCCCAAGCAAAGACCGGCTTCGGCCTCTGGAGCGGCACCTGG CTCCCCACCCGCGGCCTCAACAACGCCAACAAAGAAGACGCAACCACCTACGTCGACGTCCGCGCCTGCGCCCTC CTCGTCGACACGCAGTACCCAGACCGCGCCGAGCCACCACCGCCCTCGCCCAACGAGCCCGACTACGCGTCCGAT GAGGGAACGTGGGCCGTCGTCAAGTGCGAGCCCTTTCTCGACGCGGCGGCCACGCACCTCTTTGCTCGCGCGCTC TGGGTGCCGGATCTGGCGATTGTGCCGCATCGGCTGAGGAGGAAATGGGGGCGGCACTGTCTTCTGCAGAGGCGG AGGAATTATTGA |
| Transcript | >Ophcf2|02881 ATGGCGCCGTCCCAACCACCAGCGCAGTTCGAGCACTCAGTAGCCACCCATGCCAAGAAAAAGAAGCGGTACGGG CCGTACCCTCTCGAACCCATCACCGTCTTCTACTTCTTCCTCGCTGCCAACGTCGTGGCCGCGTTGTGGGCACCT ATTCAGGACTGCGACGAGACTTTCAACTACTGGGAGCCTACCCACTATCTCTCTCGTGGCTATGGCCTCCAGACT TGGGAGTATTCTCCCGACTACGCCATCCGCAGCTGGCTCTACATCGCCCTGCACGCCGTCGTGGGAACCGCACGC CGGATTCTTCCGCACTCGTCCAAGGTATCCGAGTTCTATTTCGTACGCTACGCACTGGCCTTCGTCTGCGCCATC TGCCAAACGATCCTCTTCAAAGCCATCTGCCTCTCCCTCAACGCCCGCGTCGCCGTCTTCTTCATCCTCGCCACC ATCTCCAGCCCCGGAAACTTCCACGCAAGCACCGCCTTTCTACCCTCGAGCTTCGCCATGTACACGGCCATGCTA GGCGCCGCCTGTTTCATGAATTGGCGCGGCGGGCTCAAGACATCGCGCGGCATCTTCTGGTTTGCCGTTGGCGCC ATTCTCGGCTGGCCCTTTGCCGCCGCTCTTTGCGCGCCTTTTGTCGTTGAGGAGGTTGTCCTGGCTGTCTTTAGC GATGGGCAGGCCACCTTTGAGGCCTTTGTTCGTCTTTTTCGCGGTGGCGTCGCGGGTTTACTTGTTCTGCTCACC GACTTCCTCGTCAACCTCTTCTTTTACCGAAAAGCGACAATCGTCACATGGAACATCGTAAAGTACAACATCTTC TCTTCCAACGGCGGCCCCGAGCTGTACGGCACCGAGCCCTGGCACTTCTACCTCAAGAACCTAGCCCTCAACTTC AACATGTGGTTCGTCCTGGCCCTACTGGCGCTGCCCATTTTCCTCCTCCAAAAAGCCCTCTCGTCATCCGGACAC GGCTTTCAATCCGGATTGCGCACCGTCGTCTTCATCGCCCCTTTTTACATGTGGCTCGCCATCTTTACGGCCCAG CCGCACAAGGAAGAGCGATTCATGTACCCGCTATACCCATTCCTAGCGCTCAACGCGTCCATGTCCCTGCACATG ATCCTATCTGCCTTGGGTCGCGTAGGCCCGAGATCGCTGATAGGCAGGATCCCCGGACGAGTCAAACTCCTCGGC GCAGTACTCGTCCTGCTCTCGTCACTGATTCTCGGACTATCCCGTATCTACGGCGTCTACTCAGCCTACAGCGCC CCCTTACGCATCTACCAACCACTCTGGGGTGACGCCCGAGGCAACAACGCAACCGGCAGACCCGAAGACTCAGTC TGTTTCGGCAAAGAATGGTACCGCTTCCCAACATCCTACTTCCTCCCCCGCGGCATGCACGCCAAATTCATCCGC TCCGACTTCCACGGCCTCCTCCCAGGCGAATTCTCCCAAGCAAAGACCGGCTTCGGCCTCTGGAGCGGCACCTGG CTCCCCACCCGCGGCCTCAACAACGCCAACAAAGAAGACGCAACCACCTACGTCGACGTCCGCGCCTGCGCCCTC CTCGTCGACACGCAGTACCCAGACCGCGCCGAGCCACCACCGCCCTCGCCCAACGAGCCCGACTACGCGTCCGAT GAGGGAACGTGGGCCGTCGTCAAGTGCGAGCCCTTTCTCGACGCGGCGGCCACGCACCTCTTTGCTCGCGCGCTC TGGGTGCCGGATCTGGCGATTGTGCCGCATCGGCTGAGGAGGAAATGGGGGCGGCACTGTCTTCTGCAGAGGCGG AGGAATTATTGA |
| Gene | >Ophcf2|02881 ATGGCGCCGTCCCAACCACCAGCGCAGTTCGAGCACTCAGTAGCCACCCATGCCAAGAAAAAGAAGTACGCCATC AATCATATTCATCTGTTCCAACTCTGCTCTCTTTCTCTAAAAGCTCTCTAGGCGGTACGGGCCGTACCCTCTCGA ACCCATCACCGTCTTCTACTTCTTCCTCGCTGCCAACGTCGTGGCCGCGTTGTGGGCACCTATTCAGGACTGCGA CGAGACTTTCAACTACTGGGAGCCTACCCACTATCTCTCTCGTGGCTATGGCCTCCAGACTTGGGAGTATTCTCC CGACTACGCCATCCGCAGCTGGCTCTACATCGCCCTGCACGCCGTCGTGGGAACCGCACGCCGGATTCTTCCGCA CTCGTCCAAGGTTAATTCTCATCCTTATTTCCCTTCAATTTCGACTCCTAATCGTTCTCAGGTATCCGAGTTCTA TTTCGTACGCTACGCACTGGCCTTCGTCTGCGCCATCTGCCAAACGATCCTCTTCAAAGCCATCTGCCTCTCCCT CAACGCCCGCGTCGCCGTCTTCTTCATCCTCGCCACCATCTCCAGCCCCGGAAACTTCCACGCAAGCACCGCCTT TCTACCCTCGAGCTTCGCCATGTACACGGCCATGCTAGGCGCCGCCTGTTTCATGAATTGGCGCGGCGGGCTCAA GACATCGCGCGGCATCTTCTGGTTTGCCGTTGGCGCCATTCTCGGCTGGCCCTTTGCCGCCGCTCTTTGCGCGCC TTTTGTCGTTGAGGAGGTTGTCCTGGCTGTCTTTAGCGATGGGCAGGCCACCTTTGAGGCCTTTGTTCGTCTTTT TCGCGGTGGCGTCGCGGGTTTACTTGTTCTGGTGAGCACATGCTGGCGATACACTGGCCTTGAAACCTCAACTTA CGCGCTCCAAGCTCACCGACTTCCTCGTCAACCTCTTCTTTTACCGAAAAGCGACAATCGTCACATGGAACATCG TAAAGTACAACATCTTCTCTTCCAACGGCGGCCCCGAGCTGTACGGCACCGAGCCCTGGCACTTCTACCTCAAGA ACCTAGCCCTCAACTTCAACATGTGGTTCGTCCTGGCCCTACTGGCGCTGCCCATTTTCCTCCTCCAAAAAGCCC TCTCGTCATCCGGACACGGCTTTCAATCCGGATTGCGCACCGTCGTCTTCATCGCCCCTTTTTACATGTGGCTCG CCATCTTTACGGCCCAGCCGCACAAGGAAGAGCGATTCATGTACCCGCTATACCCATTCCTAGCGCTCAACGCGT CCATGTCCCTGCACATGATCCTATCTGCCTTGGGTCGCGTAGGCCCGAGATCGCTGATAGGCAGGATCCCCGGAC GAGTCAAACTCCTCGGCGCAGTACTCGTCCTGCTCTCGTCACTGATTCTCGGACTATCCCGTATCTACGGCGTCT ACTCAGCCTACAGCGCCCCCTTACGCATCTACCAACCACTCTGGGGTGACGCCCGAGGCAACAACGCAACCGGCA GACCCGAAGACTCAGTCTGTTTCGGCAAAGAATGGTACCGCTTCCCAACATCCTACTTCCTCCCCCGCGGCATGC ACGCCAAATTCATCCGCTCCGACTTCCACGGCCTCCTCCCAGGCGAATTCTCCCAAGCAAAGACCGGCTTCGGCC TCTGGAGCGGCACCTGGCTCCCCACCCGCGGCCTCAACAACGCCAACAAAGAAGACGCAACCACCTACGTCGACG TCCGCGCCTGCGCCCTCCTCGTCGACACGCAGTACCCAGACCGCGCCGAGCCACCACCGCCCTCGCCCAACGAGC CCGACTACGCGTCCGATGAGGGAACGTGGGCCGTCGTCAAGTGCGAGCCCTTTCTCGACGCGGCGGCCACGCACC TCTTTGCTCGCGCGCTCTGGGTGCCGGATCTGGCGATTGTGCCGCATCGGCTGAGGAGGAAATGGGGGCGGCACT GTCTTCTGCAGAGGCGGAGGAATTATTGA |