Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02868
Gene name
Locationscaffold_02:4976715..4978140
Strand-
Gene length (bp)1425
Transcript length (bp)1311
Coding sequence length (bp)1311
Protein length (aa) 437

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02868
MLPLKPHRLRTSKLVLLLLLFCITWLLTSHLLATFLLLLHPSPQSFVSSSTNATLGFGRILVVSQQGSPRRKTIL
QAANVTELLLTVPAQPVWTEDDERRFRLERDSSIQKGSLLAWLGHLHALQDFLDSGVETALFLEDDVDWDIRLRT
VQAPLVSTAARRLLAGSSNGQRYPYGDPDGWDLLYLGHCGDYWHGMDIDFVDGHVQPSDLESTPHITFTDPSLSH
PDNLHPFTASLLKNLGVRNQTRLFHRSVFPLCTFGYALSRAGAHRLLQLGRKEPSTKGHKAYDVLILLSCRDYGL
RCWTVNPELFHHVPGPSIIDVQQGNKELPPVDRAAKDQIDARGETPNIDCGFWDGSFAFREEDVDRLEWLRAEVG
RKATNLTLGRAHPLHTAPLIQELKAPTRHQQLKRRNGRDHTAHKPLSSEEPSQPLRKVIGR*
Coding >Ophcf2|02868
ATGCTTCCTCTAAAACCTCACCGACTGCGCACCAGCAAACTTGTCCTCCTCCTCCTCCTCTTCTGCATCACGTGG
CTCCTCACCAGCCATCTACTCGCCACCTTCCTCCTCCTCCTCCATCCTTCCCCCCAAAGCTTCGTCTCGAGCAGC
ACCAACGCGACTCTCGGCTTCGGTCGCATCTTGGTCGTTTCGCAGCAGGGCTCGCCGCGGCGCAAGACGATCCTT
CAGGCCGCCAATGTGACGGAGCTGCTCCTCACCGTGCCGGCGCAGCCTGTATGGACCGAGGACGATGAGCGTCGC
TTCCGGCTGGAGAGGGATTCTTCTATTCAGAAGGGTTCGCTGCTGGCTTGGCTGGGCCACCTGCACGCGTTGCAA
GACTTCCTCGATTCCGGTGTTGAGACGGCCTTGTTTCTCGAAGATGACGTCGACTGGGATATTCGACTGCGGACG
GTGCAGGCGCCGCTCGTCTCTACCGCTGCTCGTCGCCTCCTGGCCGGTTCCTCCAACGGGCAACGATATCCCTAC
GGCGATCCCGACGGGTGGGATCTGCTCTATCTCGGTCACTGCGGCGACTATTGGCACGGAATGGACATTGACTTC
GTCGACGGTCACGTCCAGCCCTCAGACCTCGAGTCAACACCTCACATCACCTTCACAGACCCATCCCTTTCACAT
CCCGATAACCTCCACCCCTTCACAGCCTCTCTCCTAAAGAACCTAGGCGTACGCAACCAAACTCGCCTCTTCCAC
CGCTCCGTCTTCCCCCTCTGCACCTTTGGCTACGCCCTCTCCCGCGCCGGCGCCCACCGCCTCCTCCAGCTCGGT
AGAAAAGAGCCATCGACCAAAGGCCATAAAGCCTACGACGTCCTCATCCTCCTCAGCTGTCGCGACTACGGCCTC
CGCTGCTGGACCGTCAACCCAGAACTCTTCCATCACGTCCCGGGGCCGAGCATCATTGACGTCCAGCAGGGGAAT
AAAGAGCTACCGCCAGTGGATCGCGCGGCCAAGGATCAGATCGATGCGCGTGGCGAGACGCCAAACATCGACTGC
GGCTTCTGGGACGGCTCTTTTGCTTTTCGAGAGGAGGACGTTGATCGTCTGGAGTGGTTGAGAGCAGAGGTCGGT
AGGAAGGCGACGAATCTGACTCTCGGTCGAGCTCATCCGCTCCACACGGCGCCCTTAATCCAAGAGCTGAAAGCG
CCCACCCGCCATCAGCAGCTGAAGCGGCGAAACGGCCGCGACCACACGGCCCATAAGCCATTAAGCAGCGAGGAA
CCCAGCCAGCCTCTCCGCAAAGTCATCGGACGATAA
Transcript >Ophcf2|02868
ATGCTTCCTCTAAAACCTCACCGACTGCGCACCAGCAAACTTGTCCTCCTCCTCCTCCTCTTCTGCATCACGTGG
CTCCTCACCAGCCATCTACTCGCCACCTTCCTCCTCCTCCTCCATCCTTCCCCCCAAAGCTTCGTCTCGAGCAGC
ACCAACGCGACTCTCGGCTTCGGTCGCATCTTGGTCGTTTCGCAGCAGGGCTCGCCGCGGCGCAAGACGATCCTT
CAGGCCGCCAATGTGACGGAGCTGCTCCTCACCGTGCCGGCGCAGCCTGTATGGACCGAGGACGATGAGCGTCGC
TTCCGGCTGGAGAGGGATTCTTCTATTCAGAAGGGTTCGCTGCTGGCTTGGCTGGGCCACCTGCACGCGTTGCAA
GACTTCCTCGATTCCGGTGTTGAGACGGCCTTGTTTCTCGAAGATGACGTCGACTGGGATATTCGACTGCGGACG
GTGCAGGCGCCGCTCGTCTCTACCGCTGCTCGTCGCCTCCTGGCCGGTTCCTCCAACGGGCAACGATATCCCTAC
GGCGATCCCGACGGGTGGGATCTGCTCTATCTCGGTCACTGCGGCGACTATTGGCACGGAATGGACATTGACTTC
GTCGACGGTCACGTCCAGCCCTCAGACCTCGAGTCAACACCTCACATCACCTTCACAGACCCATCCCTTTCACAT
CCCGATAACCTCCACCCCTTCACAGCCTCTCTCCTAAAGAACCTAGGCGTACGCAACCAAACTCGCCTCTTCCAC
CGCTCCGTCTTCCCCCTCTGCACCTTTGGCTACGCCCTCTCCCGCGCCGGCGCCCACCGCCTCCTCCAGCTCGGT
AGAAAAGAGCCATCGACCAAAGGCCATAAAGCCTACGACGTCCTCATCCTCCTCAGCTGTCGCGACTACGGCCTC
CGCTGCTGGACCGTCAACCCAGAACTCTTCCATCACGTCCCGGGGCCGAGCATCATTGACGTCCAGCAGGGGAAT
AAAGAGCTACCGCCAGTGGATCGCGCGGCCAAGGATCAGATCGATGCGCGTGGCGAGACGCCAAACATCGACTGC
GGCTTCTGGGACGGCTCTTTTGCTTTTCGAGAGGAGGACGTTGATCGTCTGGAGTGGTTGAGAGCAGAGGTCGGT
AGGAAGGCGACGAATCTGACTCTCGGTCGAGCTCATCCGCTCCACACGGCGCCCTTAATCCAAGAGCTGAAAGCG
CCCACCCGCCATCAGCAGCTGAAGCGGCGAAACGGCCGCGACCACACGGCCCATAAGCCATTAAGCAGCGAGGAA
CCCAGCCAGCCTCTCCGCAAAGTCATCGGACGATAA
Gene >Ophcf2|02868
ATGCTTCCTCTAAAACCTCACCGACTGCGCACCAGCAAACTTGTCCTCCTCCTCCTCCTCTTCTGCATCACGTGG
CTCCTCACCAGCCATCTACTCGCCACCTTCCTCCTCCTCCTCCATCCTTCCCCCCAAAGCTTCGTCTCGAGCAGC
ACCAACGCGACTCTCGGCTTCGGTCGCATCTTGGTCGTTTCGCAGCAGGGCTCGCCGCGGCGCAAGACGATCCTT
CAGGCCGCCAATGTGACGGAGCTGCTCCTCACCGTGCCGGCGCAGCCTGTATGGACCGAGGACGATGAGCGTCGC
TTCCGGCTGGAGAGGGATTCTTCTATTCAGAAGGGTTCGCTGCTGGCTTGGCTGGGCCACCTGCACGCGTTGCAA
GAGTAAGCACCTCCGTCACCCGCCTATCCCGCTCTTACTTACACTCGACTCCAGCTTCCTCGATTCCGGTGTTGA
GACGGCCTTGTTTCTCGAAGATGACGTCGACTGGGATATTCGACTGCGGACGGTGCAGGCGCCGCTCGTCTCTAC
CGCTGCTCGTCGCCTCCTGGCCGGTTCCTCCAACGGGCAACGATATCCCTACGGCGATCCCGACGGGTGGGATCT
GCTCTATCTCGGTCACTGCGGCGACTATTGGCACGGAATGGACATTGACTTCGTCGACGGTCACGTCCAGCCCTC
AGACCTCGAGTCAACACCTCACATCACCTTCACAGACCCATCCCTTTCACATCCCGATAACCTCCACCCCTTCAC
AGCCTCTCTCCTAAAGAACCTAGGCGTACGCAACCAAACTCGCCTCTTCCACCGCTCCGTCTTCCCCCTCTGCAC
CTTTGGCTACGCCCTCTCCCGCGCCGGCGCCCACCGCCTCCTCCAGCTCGGTAGAAAAGAGCCATCGACCAAAGG
CCATAAAGCCTACGACGTCCTCATCCTCCTCAGCTGTCGCGACTACGGCCTCCGCTGCTGGACCGTCAACCCAGA
ACTCTTCCATCACGTCCCGGGGCCGAGCATCATTGACGTCCAGCAGGGGAATAAAGAGCTACCGCCAGTGGATCG
CGCGGCCAAGGATCAGATCGATGCGCGTGGCGAGACGCCAAACATCGACTGCGGCTTCTGGGACGGCTCTTTTGC
TTTTCGAGAGGAGGACGTTGATCGTCTGGAGTGGTTGAGAGCAGAGGTCGGTAGGAAGGGTATATGTCTGAAATC
AGGGCGACAATCACAACCGGAATTGCCATGAACTCGGCCCTCGAAGCGACGAATCTGACTCTCGGTCGAGCTCAT
CCGCTCCACACGGCGCCCTTAATCCAAGAGCTGAAAGCGCCCACCCGCCATCAGCAGCTGAAGCGGCGAAACGGC
CGCGACCACACGGCCCATAAGCCATTAAGCAGCGAGGAACCCAGCCAGCCTCTCCGCAAAGTCATCGGACGATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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