Protein ID | Ophcf2|02862 |
Gene name | |
Location | scaffold_02:4965502..4966675 |
Strand | + |
Gene length (bp) | 1173 |
Transcript length (bp) | 1173 |
Coding sequence length (bp) | 1173 |
Protein length (aa) | 391 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 217 | 239 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02862 MARSTTWSAPDPPTTTRPALSKRRDAGTVCGFIGGDAAFPATCIAGSHCAVDVAHGVVGCCPDDGPCATGVFTGC VDAHSGPQSVSDPYVFTCSDGGDVCYRNLFEGGFYQFGCGAGSHLATSVATSPPDGMAGLAIARVTLAMTESVRA FATPVEVGGFVTPSFATTTTMTTMTTSTMDSETTSLARAADNPTSRLAFGPVSAPPRESSTPPSGAVIGGIIGGV FGLGLLLAAIIFVCCRRRRRSMERVDSNKDTSHNDSNNNNNNNDDDDLTQDDDMDNTYEHKPLTHDASRPPHALF PDTDNFTGRGTGANKGGVVVTAGGGTILQAVNGGGDDPGPHPLVVDGSAWDSPRPAPPLPDETIEMESSAAYPGL RRKGGGALWQQNRWI* |
Coding | >Ophcf2|02862 ATGGCCAGGTCGACGACGTGGTCGGCACCCGATCCTCCCACGACGACGCGCCCTGCCCTGAGCAAACGTCGCGAT GCCGGAACCGTCTGCGGCTTCATAGGAGGCGACGCGGCCTTTCCGGCAACCTGCATCGCCGGATCTCACTGCGCC GTCGACGTCGCTCACGGCGTCGTTGGCTGCTGTCCAGATGACGGCCCGTGCGCGACAGGCGTCTTCACCGGCTGC GTCGATGCCCATAGCGGGCCGCAGTCCGTGTCAGACCCGTACGTCTTCACGTGCTCGGACGGAGGGGACGTGTGT TATCGGAACTTGTTCGAGGGGGGATTCTACCAGTTTGGTTGCGGGGCGGGTTCGCATCTTGCTACTTCGGTGGCT ACGTCGCCGCCTGATGGTATGGCTGGATTGGCTATTGCGAGGGTTACCTTGGCTATGACGGAGTCGGTTAGGGCT TTTGCTACGCCTGTTGAGGTGGGAGGGTTTGTGACGCCTTCTTTTGCGACGACGACGACGATGACGACGATGACG ACATCGACGATGGATTCGGAAACTACCAGCCTGGCCAGGGCCGCCGATAACCCGACTTCGAGATTGGCTTTCGGT CCCGTTTCGGCCCCGCCTCGGGAGTCGTCGACGCCGCCGAGCGGAGCTGTGATCGGAGGCATCATCGGCGGTGTC TTTGGACTGGGCCTGTTGCTGGCAGCCATCATCTTCGTCTGCTGTCGTCGTCGAAGGAGATCGATGGAAAGAGTC GACAGCAACAAAGACACCTCCCACAACGACAGCAACAACAACAACAACAACAACGACGACGACGACCTCACCCAA GACGATGACATGGACAACACCTACGAGCACAAGCCCCTCACCCATGACGCCTCCCGGCCTCCCCACGCCCTCTTC CCGGACACGGACAACTTCACCGGCCGCGGCACCGGCGCCAACAAGGGCGGCGTCGTCGTCACCGCCGGCGGAGGA ACGATATTGCAGGCTGTCAACGGCGGTGGCGATGATCCGGGACCGCATCCCCTCGTCGTCGATGGATCGGCTTGG GATTCGCCCAGGCCGGCGCCTCCTCTTCCGGACGAGACGATTGAGATGGAGTCGTCCGCTGCGTATCCCGGGCTG CGTAGGAAGGGCGGAGGGGCGCTGTGGCAGCAGAATCGGTGGATATGA |
Transcript | >Ophcf2|02862 ATGGCCAGGTCGACGACGTGGTCGGCACCCGATCCTCCCACGACGACGCGCCCTGCCCTGAGCAAACGTCGCGAT GCCGGAACCGTCTGCGGCTTCATAGGAGGCGACGCGGCCTTTCCGGCAACCTGCATCGCCGGATCTCACTGCGCC GTCGACGTCGCTCACGGCGTCGTTGGCTGCTGTCCAGATGACGGCCCGTGCGCGACAGGCGTCTTCACCGGCTGC GTCGATGCCCATAGCGGGCCGCAGTCCGTGTCAGACCCGTACGTCTTCACGTGCTCGGACGGAGGGGACGTGTGT TATCGGAACTTGTTCGAGGGGGGATTCTACCAGTTTGGTTGCGGGGCGGGTTCGCATCTTGCTACTTCGGTGGCT ACGTCGCCGCCTGATGGTATGGCTGGATTGGCTATTGCGAGGGTTACCTTGGCTATGACGGAGTCGGTTAGGGCT TTTGCTACGCCTGTTGAGGTGGGAGGGTTTGTGACGCCTTCTTTTGCGACGACGACGACGATGACGACGATGACG ACATCGACGATGGATTCGGAAACTACCAGCCTGGCCAGGGCCGCCGATAACCCGACTTCGAGATTGGCTTTCGGT CCCGTTTCGGCCCCGCCTCGGGAGTCGTCGACGCCGCCGAGCGGAGCTGTGATCGGAGGCATCATCGGCGGTGTC TTTGGACTGGGCCTGTTGCTGGCAGCCATCATCTTCGTCTGCTGTCGTCGTCGAAGGAGATCGATGGAAAGAGTC GACAGCAACAAAGACACCTCCCACAACGACAGCAACAACAACAACAACAACAACGACGACGACGACCTCACCCAA GACGATGACATGGACAACACCTACGAGCACAAGCCCCTCACCCATGACGCCTCCCGGCCTCCCCACGCCCTCTTC CCGGACACGGACAACTTCACCGGCCGCGGCACCGGCGCCAACAAGGGCGGCGTCGTCGTCACCGCCGGCGGAGGA ACGATATTGCAGGCTGTCAACGGCGGTGGCGATGATCCGGGACCGCATCCCCTCGTCGTCGATGGATCGGCTTGG GATTCGCCCAGGCCGGCGCCTCCTCTTCCGGACGAGACGATTGAGATGGAGTCGTCCGCTGCGTATCCCGGGCTG CGTAGGAAGGGCGGAGGGGCGCTGTGGCAGCAGAATCGGTGGATATGA |
Gene | >Ophcf2|02862 ATGGCCAGGTCGACGACGTGGTCGGCACCCGATCCTCCCACGACGACGCGCCCTGCCCTGAGCAAACGTCGCGAT GCCGGAACCGTCTGCGGCTTCATAGGAGGCGACGCGGCCTTTCCGGCAACCTGCATCGCCGGATCTCACTGCGCC GTCGACGTCGCTCACGGCGTCGTTGGCTGCTGTCCAGATGACGGCCCGTGCGCGACAGGCGTCTTCACCGGCTGC GTCGATGCCCATAGCGGGCCGCAGTCCGTGTCAGACCCGTACGTCTTCACGTGCTCGGACGGAGGGGACGTGTGT TATCGGAACTTGTTCGAGGGGGGATTCTACCAGTTTGGTTGCGGGGCGGGTTCGCATCTTGCTACTTCGGTGGCT ACGTCGCCGCCTGATGGTATGGCTGGATTGGCTATTGCGAGGGTTACCTTGGCTATGACGGAGTCGGTTAGGGCT TTTGCTACGCCTGTTGAGGTGGGAGGGTTTGTGACGCCTTCTTTTGCGACGACGACGACGATGACGACGATGACG ACATCGACGATGGATTCGGAAACTACCAGCCTGGCCAGGGCCGCCGATAACCCGACTTCGAGATTGGCTTTCGGT CCCGTTTCGGCCCCGCCTCGGGAGTCGTCGACGCCGCCGAGCGGAGCTGTGATCGGAGGCATCATCGGCGGTGTC TTTGGACTGGGCCTGTTGCTGGCAGCCATCATCTTCGTCTGCTGTCGTCGTCGAAGGAGATCGATGGAAAGAGTC GACAGCAACAAAGACACCTCCCACAACGACAGCAACAACAACAACAACAACAACGACGACGACGACCTCACCCAA GACGATGACATGGACAACACCTACGAGCACAAGCCCCTCACCCATGACGCCTCCCGGCCTCCCCACGCCCTCTTC CCGGACACGGACAACTTCACCGGCCGCGGCACCGGCGCCAACAAGGGCGGCGTCGTCGTCACCGCCGGCGGAGGA ACGATATTGCAGGCTGTCAACGGCGGTGGCGATGATCCGGGACCGCATCCCCTCGTCGTCGATGGATCGGCTTGG GATTCGCCCAGGCCGGCGCCTCCTCTTCCGGACGAGACGATTGAGATGGAGTCGTCCGCTGCGTATCCCGGGCTG CGTAGGAAGGGCGGAGGGGCGCTGTGGCAGCAGAATCGGTGGATATGA |