Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02860
Gene name
Locationscaffold_02:4958740..4960946
Strand-
Gene length (bp)2206
Transcript length (bp)1044
Coding sequence length (bp)1044
Protein length (aa) 348

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02860
MPLAHVVIAPGVVIAVSVTMAVAMALYGSPELRRVADDARRRIAMAVHSLGDGIDPYLREEPRFNRPEDADGFML
SSRDPGFAADDEALRRQREELLYWNRMRMQQYRDQEATAGAEQRVIGSEMQDSPRPDAPLAHAPPPATPMMTSKA
PPRPLATLPHRPPPFTNPVSPSEDHRQEAYASIQAWARDSSNHGPFLAPVNDTVTVPASEDDGELEELTSNSNSN
SNSNSNSDCNYNSNTAEESSMKVSTAFALVLSATGAAAVLGCHDDMYYCGSALLDSGYLPSVIQRSYEKAGHSRK
PAGELKDHLFYCKKPSSVMSNYREFEWVMKCDNMCKKNGKWRSDQCV*
Coding >Ophcf2|02860
ATGCCGCTCGCGCACGTCGTCATCGCTCCGGGCGTCGTCATCGCCGTATCCGTCACAATGGCCGTCGCCATGGCC
CTCTACGGTTCGCCTGAACTGCGCCGCGTCGCTGATGATGCCCGACGGCGCATCGCCATGGCTGTCCACTCGCTT
GGCGATGGCATCGATCCTTATCTTCGAGAAGAGCCGCGGTTTAATCGTCCAGAAGATGCGGATGGCTTCATGCTC
TCCTCGCGCGATCCGGGTTTCGCCGCTGATGATGAGGCGCTGAGGAGACAGCGCGAAGAGCTTCTCTACTGGAAT
CGCATGCGGATGCAACAGTATAGAGATCAAGAAGCGACAGCGGGAGCGGAACAGAGAGTCATCGGATCAGAGATG
CAAGACTCGCCTCGCCCCGACGCCCCCCTCGCTCACGCGCCACCACCCGCGACGCCCATGATGACTTCCAAAGCG
CCACCTCGCCCCCTCGCCACCCTCCCTCATCGACCTCCCCCCTTCACGAACCCCGTCTCCCCCTCCGAAGATCAC
CGCCAGGAAGCCTACGCCTCCATCCAAGCCTGGGCCCGGGACTCGAGCAACCACGGTCCGTTTTTGGCGCCGGTC
AACGACACTGTCACGGTGCCGGCGTCGGAAGATGATGGCGAGCTTGAAGAACTGACCAGCAACAGCAACAGCAAC
AGCAACAGCAACAGCAACAGCGACTGCAACTACAACAGCAACACAGCAGAAGAATCCAGCATGAAAGTCAGCACG
GCGTTCGCCCTCGTTCTCTCCGCCACGGGAGCCGCGGCGGTGTTGGGGTGTCACGATGATATGTATTATTGCGGG
AGTGCTCTTCTGGATAGCGGTTATCTTCCGTCCGTAATTCAAAGGTCATACGAAAAAGCGGGCCATTCTCGCAAA
CCCGCAGGAGAATTGAAGGATCATCTGTTTTATTGCAAGAAGCCTAGCAGTGTCATGAGCAATTACCGAGAGTTT
GAATGGGTCATGAAGTGTGATAACATGTGTAAGAAAAATGGGAAGTGGCGATCGGATCAGTGCGTCTAG
Transcript >Ophcf2|02860
ATGCCGCTCGCGCACGTCGTCATCGCTCCGGGCGTCGTCATCGCCGTATCCGTCACAATGGCCGTCGCCATGGCC
CTCTACGGTTCGCCTGAACTGCGCCGCGTCGCTGATGATGCCCGACGGCGCATCGCCATGGCTGTCCACTCGCTT
GGCGATGGCATCGATCCTTATCTTCGAGAAGAGCCGCGGTTTAATCGTCCAGAAGATGCGGATGGCTTCATGCTC
TCCTCGCGCGATCCGGGTTTCGCCGCTGATGATGAGGCGCTGAGGAGACAGCGCGAAGAGCTTCTCTACTGGAAT
CGCATGCGGATGCAACAGTATAGAGATCAAGAAGCGACAGCGGGAGCGGAACAGAGAGTCATCGGATCAGAGATG
CAAGACTCGCCTCGCCCCGACGCCCCCCTCGCTCACGCGCCACCACCCGCGACGCCCATGATGACTTCCAAAGCG
CCACCTCGCCCCCTCGCCACCCTCCCTCATCGACCTCCCCCCTTCACGAACCCCGTCTCCCCCTCCGAAGATCAC
CGCCAGGAAGCCTACGCCTCCATCCAAGCCTGGGCCCGGGACTCGAGCAACCACGGTCCGTTTTTGGCGCCGGTC
AACGACACTGTCACGGTGCCGGCGTCGGAAGATGATGGCGAGCTTGAAGAACTGACCAGCAACAGCAACAGCAAC
AGCAACAGCAACAGCAACAGCGACTGCAACTACAACAGCAACACAGCAGAAGAATCCAGCATGAAAGTCAGCACG
GCGTTCGCCCTCGTTCTCTCCGCCACGGGAGCCGCGGCGGTGTTGGGGTGTCACGATGATATGTATTATTGCGGG
AGTGCTCTTCTGGATAGCGGTTATCTTCCGTCCGTAATTCAAAGGTCATACGAAAAAGCGGGCCATTCTCGCAAA
CCCGCAGGAGAATTGAAGGATCATCTGTTTTATTGCAAGAAGCCTAGCAGTGTCATGAGCAATTACCGAGAGTTT
GAATGGGTCATGAAGTGTGATAACATGTGTAAGAAAAATGGGAAGTGGCGATCGGATCAGTGCGTCTAG
Gene >Ophcf2|02860
ATGCCGCTCGCGCACGTCGTCATCGCTCCGGGCGTCGTCATCGCCGTATCCGTCACAATGGCCGTCGCCATGGCC
CTCTACGGTTCGCCTGAACTGCGCCGCGTCGCTGATGATGCCCGACGGCGCATCGCCATGGCTGTCCACTCGCTT
GGCGATGGCATCGATCCTTATCTTCGAGAAGAGCCGCGGTTTAATCGTCCAGAAGATGCGGATGGCTTCATGCTC
TCCTCGCGCGATCCGGGTTTCGCCGCTGATGATGAGGCGCTGAGGAGACAGCGCGAAGAGCTTCTCTACTGGAAT
CGCATGCGGATGCAACAGTATAGAGATCAAGAAGCGACAGCGGGAGCGGAACAGAGAGTCATCGGATCAGAGATG
CAAGACTCGCCTCGCCCCGACGCCCCCCTCGCTCACGGTTCCGGAGCCGAAGCCCTTCCAGCCACGTCGGGCCTC
CGCCACCGAGGCGAACCTCCGAACCCGGCTTCTTACTACGCCAACCCCTTCGCCGACGAGCTCGCCGCTTCGGAC
ATCTATAGCGCCACCACCCGCGACGCCCATGATGACTTCCAAAGCGCCACCTCGCCCCCTCGCCACCCTCCCTCA
TCGACCTCCCCCCTTCACGAACCCCGTCTCCCCCTCCGAAGATCACCGCCAGGAAGCCTACGCCTCCATCCAAGC
CTGGGCCCGGGACTCGAGCAACCACGGTCCGTTTTTGGCGCCGGTCAACGACACTGTCACGGTGCCGGCGTCGGA
AGATGATGGCGAGCTTGTTAGTGACGGACGGCTTACGCCTACGGCCACGGATGCTTCGGCGCCTTCACTTGCGGG
TTCGGGAGAGCAGGTTTCGCGAGAGGAGGAGTCTGTGAGGCCTTTTGATGTGGTGAGTGAGAGTGACGGGATGGA
TACGCCGGCGAGTTGGACGGACATGGGCAGCGTTGTCAGCGAGAGCGAGTCTCTCGGACGGGTACAGGCGTAAGC
GTATGTTGGCTTCTTGCCTTTCTCGGTTCCTCACATTTCCCCTTGTTTTTCTTTTTTTTTTCCCTCGTCTCAAAC
ATCAACCTTCTTTTGCCTCGTCATCCTGGAGTCTTTCTTCCTGTTTCTCGCGGGGCGTTGGGTGGGATTAGTTTC
GGCAGAGGTGGACTCTTGTCGTCTCTGGTAGACAGATCATCTTGGTTCATCTACGTGACAAGCTCGCGTTTCCGG
GACCAGGGCCAGCTTTGGCCCCTACATATTCACATATGTTCGTGTGGCAGATGCGTGTAAGATGAGGGGCTTACC
TCGTGTCTCGTGTCTCGTGGTAAAGGCAATGGCTTATCGTCGGTGGCTACAGGGCATCAAGGTCGATGACAGTAG
TGAACCGCATGAAACAAGCAGAGCAGCTCAATCGGCCGGTACGAAGGTATGGCTAGGATAGCCCTCTCCGCCGAT
AATGAGCTGTAATGCGATTGTAGAGGAATGCGGCTATGAGAAAGTGTCATGCCACTGCACTATTGACAAAAGGTA
GACCTCCCTAGTGTAGGAAGGCAGTATCTCATTCTCGGGGCTATATCCGTAACAGTGGAAGGATGGTGAAGCCTT
TTCCAAGCTCTTTGCCAAGTTCTTGTTAGTGCTGCCAAGCGAGTGTTGGATACGATCCTTCCATTCGTACCTGTC
TATTAGGTGCGCCTCGCTGACCTGAGGCTTTCCTCCACTATGCACACCTATAAAAGGGAGCGTGGCAGCCCCGAT
GGGGGTAGGAAGAACTGACCAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCGACTGCAACTACAACA
GCAACACAGCAGAAGAATCCAGCATGAAAGTCAGCACGGCGTTCGCCCTCGTTCTCTCCGCCACGGGAGCCGCGG
CGGTGTTGGGGTGTCACGATGATATGTATTATTGCGGGAGTGCTCTTCTGGATAGCGGTGAGTCGTGTCTTGAGA
AGCAGAACTAGGGAAAGGTTAGGCTTGCCTCGTGCTAACCCGGACGCCGTGTCAAGGTTATCTTCCGTCCGTAAT
TCAAAGGTCATACGAAAAAGCGGGCCATTCTCGCAAACCCGCAGGAGAATTGAAGGATCATCTGTTTTATTGCAA
GAAGCCTAGCAGTGTCATGAGCAATTACCGAGAGTTTGAATGGGTCATGAAGTGTGATAACATGTGTAAGAAAAA
TGGGAAGTGGCGATCGGATCAGTGCGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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