Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02845
Gene name
Locationscaffold_02:4919860..4921008
Strand-
Gene length (bp)1148
Transcript length (bp)1092
Coding sequence length (bp)1092
Protein length (aa) 364

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00107 ADH_zinc_N Zinc-binding dehydrogenase 4.2E-21 184 312
PF13602 ADH_zinc_N_2 Zinc-binding dehydrogenase 2.4E-08 216 351
PF08240 ADH_N Alcohol dehydrogenase GroES-like domain 1.0E-04 35 98

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 64 0.45

Transmembrane Domains

Domain # Start End Length
1 173 195 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02845
MSRVLTLKKLEGGRPGRVYYPLQLQHEQVNRTPGPGEVLVQLRAVALNHRDLFLRRLLYPGLAFDRAICCDGSGV
VRAVGSNMSSFRKGDDVLLAPVRGWESDPIGPELDGGNHCVGGVRDSDFGTARDYMLVKAEDLVLSPRHLSAVEA
AALPLAGLTAWRAVVTKARCEKGMNVLITGIGGGVALSALQFVVAMGATAFITSSSEDKMEKARKLGAQAGVNYR
DSDWGKKLSALLPASRPYLDVIIDGAGGDIVDRAVELLRPGGAVVQYGMTVGPSLTWTMRAVMANIDIRGSTLGS
RREFVDMVAFVEEHGIRPVVSRCVRGLDDVEGIERLFSDMDRGSQFGKLVIEIDGADEGSPKL*
Coding >Ophcf2|02845
ATGTCTCGCGTTCTCACCCTCAAGAAGCTGGAAGGTGGTCGACCCGGCAGGGTCTACTATCCGCTTCAACTCCAG
CATGAGCAAGTCAATCGGACGCCAGGCCCGGGAGAGGTCCTAGTACAGCTCCGAGCCGTTGCCCTCAACCATCGC
GACCTCTTCCTTCGTCGCCTGCTCTACCCGGGCCTCGCCTTCGACCGCGCCATCTGCTGCGACGGAAGCGGCGTC
GTGCGAGCCGTAGGGAGTAACATGTCATCCTTTCGCAAGGGAGACGACGTCTTACTTGCGCCCGTACGAGGCTGG
GAATCGGATCCGATCGGACCGGAGCTCGACGGCGGCAACCATTGCGTCGGCGGCGTTCGGGATAGCGACTTCGGC
ACGGCGCGAGATTATATGCTTGTCAAGGCGGAGGACTTGGTGCTCTCGCCCCGTCACCTCTCCGCCGTTGAGGCT
GCTGCTCTTCCCCTGGCGGGCTTGACGGCTTGGCGGGCTGTTGTGACGAAGGCGCGCTGCGAGAAGGGGATGAAT
GTGCTCATCACGGGGATAGGGGGTGGCGTCGCGCTCAGCGCGTTACAGTTCGTCGTTGCCATGGGCGCAACGGCC
TTCATCACGTCCAGTTCGGAGGATAAGATGGAAAAGGCGCGCAAGCTCGGTGCCCAAGCCGGCGTCAACTATCGC
GATTCCGACTGGGGGAAGAAACTAAGCGCCTTGCTACCCGCGTCACGACCTTACCTAGACGTCATCATCGACGGC
GCAGGCGGTGACATCGTCGACCGGGCTGTTGAGCTGTTACGTCCGGGGGGCGCTGTGGTGCAGTACGGCATGACG
GTTGGGCCGTCGCTTACCTGGACGATGCGAGCCGTCATGGCCAACATTGACATCAGGGGCTCGACCTTGGGCTCG
AGACGCGAGTTTGTTGACATGGTTGCCTTTGTGGAGGAGCATGGGATTCGACCTGTTGTTTCGAGATGTGTGCGT
GGGCTGGATGATGTTGAGGGTATCGAGCGTTTGTTTAGCGATATGGATAGGGGGTCGCAGTTTGGGAAGCTGGTT
ATTGAGATTGATGGGGCTGATGAGGGTTCGCCTAAGCTTTGA
Transcript >Ophcf2|02845
ATGTCTCGCGTTCTCACCCTCAAGAAGCTGGAAGGTGGTCGACCCGGCAGGGTCTACTATCCGCTTCAACTCCAG
CATGAGCAAGTCAATCGGACGCCAGGCCCGGGAGAGGTCCTAGTACAGCTCCGAGCCGTTGCCCTCAACCATCGC
GACCTCTTCCTTCGTCGCCTGCTCTACCCGGGCCTCGCCTTCGACCGCGCCATCTGCTGCGACGGAAGCGGCGTC
GTGCGAGCCGTAGGGAGTAACATGTCATCCTTTCGCAAGGGAGACGACGTCTTACTTGCGCCCGTACGAGGCTGG
GAATCGGATCCGATCGGACCGGAGCTCGACGGCGGCAACCATTGCGTCGGCGGCGTTCGGGATAGCGACTTCGGC
ACGGCGCGAGATTATATGCTTGTCAAGGCGGAGGACTTGGTGCTCTCGCCCCGTCACCTCTCCGCCGTTGAGGCT
GCTGCTCTTCCCCTGGCGGGCTTGACGGCTTGGCGGGCTGTTGTGACGAAGGCGCGCTGCGAGAAGGGGATGAAT
GTGCTCATCACGGGGATAGGGGGTGGCGTCGCGCTCAGCGCGTTACAGTTCGTCGTTGCCATGGGCGCAACGGCC
TTCATCACGTCCAGTTCGGAGGATAAGATGGAAAAGGCGCGCAAGCTCGGTGCCCAAGCCGGCGTCAACTATCGC
GATTCCGACTGGGGGAAGAAACTAAGCGCCTTGCTACCCGCGTCACGACCTTACCTAGACGTCATCATCGACGGC
GCAGGCGGTGACATCGTCGACCGGGCTGTTGAGCTGTTACGTCCGGGGGGCGCTGTGGTGCAGTACGGCATGACG
GTTGGGCCGTCGCTTACCTGGACGATGCGAGCCGTCATGGCCAACATTGACATCAGGGGCTCGACCTTGGGCTCG
AGACGCGAGTTTGTTGACATGGTTGCCTTTGTGGAGGAGCATGGGATTCGACCTGTTGTTTCGAGATGTGTGCGT
GGGCTGGATGATGTTGAGGGTATCGAGCGTTTGTTTAGCGATATGGATAGGGGGTCGCAGTTTGGGAAGCTGGTT
ATTGAGATTGATGGGGCTGATGAGGGTTCGCCTAAGCTTTGA
Gene >Ophcf2|02845
ATGTCTCGCGTTCTCACCCTCAAGAAGCTGGAAGGTGGTCGACCCGGCAGGGTCTACTATCCGTGCGTCTCCATG
TTCTTACACCCATCTCACCACTCACTGATATCGTAGCATCAAGGCTTCAACTCCAGCATGAGCAAGTCAATCGGA
CGCCAGGCCCGGGAGAGGTCCTAGTACAGCTCCGAGCCGTTGCCCTCAACCATCGCGACCTCTTCCTTCGTCGCC
TGCTCTACCCGGGCCTCGCCTTCGACCGCGCCATCTGCTGCGACGGAAGCGGCGTCGTGCGAGCCGTAGGGAGTA
ACATGTCATCCTTTCGCAAGGGAGACGACGTCTTACTTGCGCCCGTACGAGGCTGGGAATCGGATCCGATCGGAC
CGGAGCTCGACGGCGGCAACCATTGCGTCGGCGGCGTTCGGGATAGCGACTTCGGCACGGCGCGAGATTATATGC
TTGTCAAGGCGGAGGACTTGGTGCTCTCGCCCCGTCACCTCTCCGCCGTTGAGGCTGCTGCTCTTCCCCTGGCGG
GCTTGACGGCTTGGCGGGCTGTTGTGACGAAGGCGCGCTGCGAGAAGGGGATGAATGTGCTCATCACGGGGATAG
GGGGTGGCGTCGCGCTCAGCGCGTTACAGTTCGTCGTTGCCATGGGCGCAACGGCCTTCATCACGTCCAGTTCGG
AGGATAAGATGGAAAAGGCGCGCAAGCTCGGTGCCCAAGCCGGCGTCAACTATCGCGATTCCGACTGGGGGAAGA
AACTAAGCGCCTTGCTACCCGCGTCACGACCTTACCTAGACGTCATCATCGACGGCGCAGGCGGTGACATCGTCG
ACCGGGCTGTTGAGCTGTTACGTCCGGGGGGCGCTGTGGTGCAGTACGGCATGACGGTTGGGCCGTCGCTTACCT
GGACGATGCGAGCCGTCATGGCCAACATTGACATCAGGGGCTCGACCTTGGGCTCGAGACGCGAGTTTGTTGACA
TGGTTGCCTTTGTGGAGGAGCATGGGATTCGACCTGTTGTTTCGAGATGTGTGCGTGGGCTGGATGATGTTGAGG
GTATCGAGCGTTTGTTTAGCGATATGGATAGGGGGTCGCAGTTTGGGAAGCTGGTTATTGAGATTGATGGGGCTG
ATGAGGGTTCGCCTAAGCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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