Protein ID | Ophcf2|02845 |
Gene name | |
Location | scaffold_02:4919860..4921008 |
Strand | - |
Gene length (bp) | 1148 |
Transcript length (bp) | 1092 |
Coding sequence length (bp) | 1092 |
Protein length (aa) | 364 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 4.2E-21 | 184 | 312 |
PF13602 | ADH_zinc_N_2 | Zinc-binding dehydrogenase | 2.4E-08 | 216 | 351 |
PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 1.0E-04 | 35 | 98 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 64 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 173 | 195 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02845 MSRVLTLKKLEGGRPGRVYYPLQLQHEQVNRTPGPGEVLVQLRAVALNHRDLFLRRLLYPGLAFDRAICCDGSGV VRAVGSNMSSFRKGDDVLLAPVRGWESDPIGPELDGGNHCVGGVRDSDFGTARDYMLVKAEDLVLSPRHLSAVEA AALPLAGLTAWRAVVTKARCEKGMNVLITGIGGGVALSALQFVVAMGATAFITSSSEDKMEKARKLGAQAGVNYR DSDWGKKLSALLPASRPYLDVIIDGAGGDIVDRAVELLRPGGAVVQYGMTVGPSLTWTMRAVMANIDIRGSTLGS RREFVDMVAFVEEHGIRPVVSRCVRGLDDVEGIERLFSDMDRGSQFGKLVIEIDGADEGSPKL* |
Coding | >Ophcf2|02845 ATGTCTCGCGTTCTCACCCTCAAGAAGCTGGAAGGTGGTCGACCCGGCAGGGTCTACTATCCGCTTCAACTCCAG CATGAGCAAGTCAATCGGACGCCAGGCCCGGGAGAGGTCCTAGTACAGCTCCGAGCCGTTGCCCTCAACCATCGC GACCTCTTCCTTCGTCGCCTGCTCTACCCGGGCCTCGCCTTCGACCGCGCCATCTGCTGCGACGGAAGCGGCGTC GTGCGAGCCGTAGGGAGTAACATGTCATCCTTTCGCAAGGGAGACGACGTCTTACTTGCGCCCGTACGAGGCTGG GAATCGGATCCGATCGGACCGGAGCTCGACGGCGGCAACCATTGCGTCGGCGGCGTTCGGGATAGCGACTTCGGC ACGGCGCGAGATTATATGCTTGTCAAGGCGGAGGACTTGGTGCTCTCGCCCCGTCACCTCTCCGCCGTTGAGGCT GCTGCTCTTCCCCTGGCGGGCTTGACGGCTTGGCGGGCTGTTGTGACGAAGGCGCGCTGCGAGAAGGGGATGAAT GTGCTCATCACGGGGATAGGGGGTGGCGTCGCGCTCAGCGCGTTACAGTTCGTCGTTGCCATGGGCGCAACGGCC TTCATCACGTCCAGTTCGGAGGATAAGATGGAAAAGGCGCGCAAGCTCGGTGCCCAAGCCGGCGTCAACTATCGC GATTCCGACTGGGGGAAGAAACTAAGCGCCTTGCTACCCGCGTCACGACCTTACCTAGACGTCATCATCGACGGC GCAGGCGGTGACATCGTCGACCGGGCTGTTGAGCTGTTACGTCCGGGGGGCGCTGTGGTGCAGTACGGCATGACG GTTGGGCCGTCGCTTACCTGGACGATGCGAGCCGTCATGGCCAACATTGACATCAGGGGCTCGACCTTGGGCTCG AGACGCGAGTTTGTTGACATGGTTGCCTTTGTGGAGGAGCATGGGATTCGACCTGTTGTTTCGAGATGTGTGCGT GGGCTGGATGATGTTGAGGGTATCGAGCGTTTGTTTAGCGATATGGATAGGGGGTCGCAGTTTGGGAAGCTGGTT ATTGAGATTGATGGGGCTGATGAGGGTTCGCCTAAGCTTTGA |
Transcript | >Ophcf2|02845 ATGTCTCGCGTTCTCACCCTCAAGAAGCTGGAAGGTGGTCGACCCGGCAGGGTCTACTATCCGCTTCAACTCCAG CATGAGCAAGTCAATCGGACGCCAGGCCCGGGAGAGGTCCTAGTACAGCTCCGAGCCGTTGCCCTCAACCATCGC GACCTCTTCCTTCGTCGCCTGCTCTACCCGGGCCTCGCCTTCGACCGCGCCATCTGCTGCGACGGAAGCGGCGTC GTGCGAGCCGTAGGGAGTAACATGTCATCCTTTCGCAAGGGAGACGACGTCTTACTTGCGCCCGTACGAGGCTGG GAATCGGATCCGATCGGACCGGAGCTCGACGGCGGCAACCATTGCGTCGGCGGCGTTCGGGATAGCGACTTCGGC ACGGCGCGAGATTATATGCTTGTCAAGGCGGAGGACTTGGTGCTCTCGCCCCGTCACCTCTCCGCCGTTGAGGCT GCTGCTCTTCCCCTGGCGGGCTTGACGGCTTGGCGGGCTGTTGTGACGAAGGCGCGCTGCGAGAAGGGGATGAAT GTGCTCATCACGGGGATAGGGGGTGGCGTCGCGCTCAGCGCGTTACAGTTCGTCGTTGCCATGGGCGCAACGGCC TTCATCACGTCCAGTTCGGAGGATAAGATGGAAAAGGCGCGCAAGCTCGGTGCCCAAGCCGGCGTCAACTATCGC GATTCCGACTGGGGGAAGAAACTAAGCGCCTTGCTACCCGCGTCACGACCTTACCTAGACGTCATCATCGACGGC GCAGGCGGTGACATCGTCGACCGGGCTGTTGAGCTGTTACGTCCGGGGGGCGCTGTGGTGCAGTACGGCATGACG GTTGGGCCGTCGCTTACCTGGACGATGCGAGCCGTCATGGCCAACATTGACATCAGGGGCTCGACCTTGGGCTCG AGACGCGAGTTTGTTGACATGGTTGCCTTTGTGGAGGAGCATGGGATTCGACCTGTTGTTTCGAGATGTGTGCGT GGGCTGGATGATGTTGAGGGTATCGAGCGTTTGTTTAGCGATATGGATAGGGGGTCGCAGTTTGGGAAGCTGGTT ATTGAGATTGATGGGGCTGATGAGGGTTCGCCTAAGCTTTGA |
Gene | >Ophcf2|02845 ATGTCTCGCGTTCTCACCCTCAAGAAGCTGGAAGGTGGTCGACCCGGCAGGGTCTACTATCCGTGCGTCTCCATG TTCTTACACCCATCTCACCACTCACTGATATCGTAGCATCAAGGCTTCAACTCCAGCATGAGCAAGTCAATCGGA CGCCAGGCCCGGGAGAGGTCCTAGTACAGCTCCGAGCCGTTGCCCTCAACCATCGCGACCTCTTCCTTCGTCGCC TGCTCTACCCGGGCCTCGCCTTCGACCGCGCCATCTGCTGCGACGGAAGCGGCGTCGTGCGAGCCGTAGGGAGTA ACATGTCATCCTTTCGCAAGGGAGACGACGTCTTACTTGCGCCCGTACGAGGCTGGGAATCGGATCCGATCGGAC CGGAGCTCGACGGCGGCAACCATTGCGTCGGCGGCGTTCGGGATAGCGACTTCGGCACGGCGCGAGATTATATGC TTGTCAAGGCGGAGGACTTGGTGCTCTCGCCCCGTCACCTCTCCGCCGTTGAGGCTGCTGCTCTTCCCCTGGCGG GCTTGACGGCTTGGCGGGCTGTTGTGACGAAGGCGCGCTGCGAGAAGGGGATGAATGTGCTCATCACGGGGATAG GGGGTGGCGTCGCGCTCAGCGCGTTACAGTTCGTCGTTGCCATGGGCGCAACGGCCTTCATCACGTCCAGTTCGG AGGATAAGATGGAAAAGGCGCGCAAGCTCGGTGCCCAAGCCGGCGTCAACTATCGCGATTCCGACTGGGGGAAGA AACTAAGCGCCTTGCTACCCGCGTCACGACCTTACCTAGACGTCATCATCGACGGCGCAGGCGGTGACATCGTCG ACCGGGCTGTTGAGCTGTTACGTCCGGGGGGCGCTGTGGTGCAGTACGGCATGACGGTTGGGCCGTCGCTTACCT GGACGATGCGAGCCGTCATGGCCAACATTGACATCAGGGGCTCGACCTTGGGCTCGAGACGCGAGTTTGTTGACA TGGTTGCCTTTGTGGAGGAGCATGGGATTCGACCTGTTGTTTCGAGATGTGTGCGTGGGCTGGATGATGTTGAGG GTATCGAGCGTTTGTTTAGCGATATGGATAGGGGGTCGCAGTTTGGGAAGCTGGTTATTGAGATTGATGGGGCTG ATGAGGGTTCGCCTAAGCTTTGA |