Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02816
Gene name
Locationscaffold_02:4855435..4857158
Strand-
Gene length (bp)1723
Transcript length (bp)1407
Coding sequence length (bp)1407
Protein length (aa) 469

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00002 7tm_2 7 transmembrane receptor (Secretin family) 9.3E-06 24 195

GO

GO Term Description Terminal node
GO:0007186 G protein-coupled receptor signaling pathway Yes
GO:0016021 integral component of membrane Yes
GO:0004930 G protein-coupled receptor activity Yes
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0060089 molecular transducer activity No
GO:0038023 signaling receptor activity No
GO:0007165 signal transduction No
GO:0008150 biological_process No
GO:0031224 intrinsic component of membrane No
GO:0050789 regulation of biological process No
GO:0009987 cellular process No
GO:0110165 cellular anatomical entity No
GO:0050794 regulation of cellular process No
GO:0065007 biological regulation No
GO:0004888 transmembrane signaling receptor activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 59 81 22
3 105 124 19
4 131 153 22
5 180 202 22
6 331 353 22
7 363 385 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 0.16 0.00 0.43
Alive In ants, during behavior modification 3017.20 572.41 5461.99
Dead In ants, recently dead 1563.22 556.96 2569.47

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.004828 yes
Alive Dead 0.012440 yes
Dead Fungus 0.004828 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02816
MAFLTPSRSAIETEHLTSRQVDVLVALERAGGSISLVALVFIFIAYALFRPVRNIQNTFIVFASVSNVGASVASI
IALDGIKAGTETPLCQTQSFLFEMFMQSDPWWSLAMSVNVFLVFYCRTSPDSFRTWWWIYCLICYGGPFAIALTL
LLIKNKERGPVYGQATIWCWVDTKWDSIRIFTYYMLIWVCIIGSFVCYSLVGYHVFRSRNRLRSFPASKNREAGQ
YERTMQQREANGGTRTTEVNSSHLSASVRGNTTLVEPKQVHVRSAGQASSFDNVPKSPGRPTAASGAPGHGSFMS
PLGEGVKIGKRFASKFVVDDPVKRAYLRTSLLFALSVLVTWIPSSLNRIHGWLVGASPFEFHVATAAVLPLQGVW
NCFIFFVTSWKVVKQCLRRLPSDSSRSARGESMGTVDRTVGRRHRDHLRSETDFDDDDDDDDDDDDDDESGNMGS
DVELRHVSDDGGKETSSV*
Coding >Ophcf2|02816
ATGGCCTTCCTCACGCCCTCGAGATCCGCGATAGAGACCGAACACCTGACATCGAGGCAAGTGGACGTGCTGGTT
GCCCTCGAACGAGCCGGAGGTTCCATCAGTCTCGTCGCTCTCGTCTTCATCTTCATCGCCTACGCTCTGTTCCGG
CCGGTGCGCAATATTCAAAACACCTTCATCGTCTTCGCCAGCGTTTCCAATGTTGGGGCCAGTGTTGCGAGCATC
ATTGCGCTGGATGGTATCAAGGCTGGAACGGAGACGCCGCTGTGTCAGACGCAGAGCTTTCTGTTTGAGATGTTC
ATGCAATCCGATCCCTGGTGGTCCCTCGCCATGTCCGTCAACGTCTTCCTCGTCTTCTATTGCCGCACCTCTCCC
GACTCGTTCCGAACATGGTGGTGGATCTACTGCCTCATCTGCTACGGCGGCCCATTCGCCATCGCCCTGACACTC
CTCCTCATCAAGAACAAGGAGCGCGGTCCCGTCTACGGTCAAGCCACGATCTGGTGCTGGGTCGACACCAAGTGG
GACAGCATTCGCATCTTTACCTACTACATGCTCATCTGGGTATGCATCATCGGCTCCTTCGTCTGCTACAGTCTG
GTAGGATATCACGTCTTCCGCTCCCGGAATCGCCTCCGCAGCTTTCCGGCCTCCAAGAACAGAGAGGCAGGCCAG
TATGAGAGGACGATGCAGCAACGTGAAGCCAATGGCGGTACGAGAACTACAGAGGTCAATAGCAGCCACTTGTCG
GCCTCCGTCAGGGGCAACACTACGCTCGTCGAGCCCAAGCAAGTCCACGTCAGATCTGCAGGACAGGCTTCATCC
TTTGACAACGTCCCGAAATCCCCCGGGAGACCTACAGCGGCGTCAGGCGCTCCTGGTCACGGCAGCTTCATGTCC
CCTCTGGGAGAGGGCGTCAAGATTGGCAAGCGGTTCGCGTCCAAGTTCGTCGTCGACGATCCCGTCAAGCGAGCC
TACCTACGGACGAGCCTCCTCTTTGCTCTCAGTGTTCTCGTTACTTGGATCCCTAGTAGTCTGAACCGGATCCAC
GGCTGGCTGGTGGGCGCGTCGCCCTTTGAGTTCCACGTCGCTACAGCCGCTGTTCTGCCTCTTCAGGGGGTCTGG
AACTGCTTCATCTTCTTCGTCACGAGCTGGAAGGTCGTCAAGCAGTGTCTCCGCCGTCTACCGTCTGATTCGTCC
CGTTCAGCTAGGGGCGAGTCCATGGGCACCGTCGATCGTACCGTCGGCCGCCGTCATCGGGATCATCTCCGGTCC
GAGACGGATTTCGACGACGACGACGACGACGACGACGACGACGACGACGACGACGAGTCGGGGAATATGGGGAGC
GATGTCGAGCTCAGACACGTGTCTGATGACGGAGGCAAAGAGACGTCTAGTGTATGA
Transcript >Ophcf2|02816
ATGGCCTTCCTCACGCCCTCGAGATCCGCGATAGAGACCGAACACCTGACATCGAGGCAAGTGGACGTGCTGGTT
GCCCTCGAACGAGCCGGAGGTTCCATCAGTCTCGTCGCTCTCGTCTTCATCTTCATCGCCTACGCTCTGTTCCGG
CCGGTGCGCAATATTCAAAACACCTTCATCGTCTTCGCCAGCGTTTCCAATGTTGGGGCCAGTGTTGCGAGCATC
ATTGCGCTGGATGGTATCAAGGCTGGAACGGAGACGCCGCTGTGTCAGACGCAGAGCTTTCTGTTTGAGATGTTC
ATGCAATCCGATCCCTGGTGGTCCCTCGCCATGTCCGTCAACGTCTTCCTCGTCTTCTATTGCCGCACCTCTCCC
GACTCGTTCCGAACATGGTGGTGGATCTACTGCCTCATCTGCTACGGCGGCCCATTCGCCATCGCCCTGACACTC
CTCCTCATCAAGAACAAGGAGCGCGGTCCCGTCTACGGTCAAGCCACGATCTGGTGCTGGGTCGACACCAAGTGG
GACAGCATTCGCATCTTTACCTACTACATGCTCATCTGGGTATGCATCATCGGCTCCTTCGTCTGCTACAGTCTG
GTAGGATATCACGTCTTCCGCTCCCGGAATCGCCTCCGCAGCTTTCCGGCCTCCAAGAACAGAGAGGCAGGCCAG
TATGAGAGGACGATGCAGCAACGTGAAGCCAATGGCGGTACGAGAACTACAGAGGTCAATAGCAGCCACTTGTCG
GCCTCCGTCAGGGGCAACACTACGCTCGTCGAGCCCAAGCAAGTCCACGTCAGATCTGCAGGACAGGCTTCATCC
TTTGACAACGTCCCGAAATCCCCCGGGAGACCTACAGCGGCGTCAGGCGCTCCTGGTCACGGCAGCTTCATGTCC
CCTCTGGGAGAGGGCGTCAAGATTGGCAAGCGGTTCGCGTCCAAGTTCGTCGTCGACGATCCCGTCAAGCGAGCC
TACCTACGGACGAGCCTCCTCTTTGCTCTCAGTGTTCTCGTTACTTGGATCCCTAGTAGTCTGAACCGGATCCAC
GGCTGGCTGGTGGGCGCGTCGCCCTTTGAGTTCCACGTCGCTACAGCCGCTGTTCTGCCTCTTCAGGGGGTCTGG
AACTGCTTCATCTTCTTCGTCACGAGCTGGAAGGTCGTCAAGCAGTGTCTCCGCCGTCTACCGTCTGATTCGTCC
CGTTCAGCTAGGGGCGAGTCCATGGGCACCGTCGATCGTACCGTCGGCCGCCGTCATCGGGATCATCTCCGGTCC
GAGACGGATTTCGACGACGACGACGACGACGACGACGACGACGACGACGACGACGAGTCGGGGAATATGGGGAGC
GATGTCGAGCTCAGACACGTGTCTGATGACGGAGGCAAAGAGACGTCTAGTGTATGA
Gene >Ophcf2|02816
ATGGCCTTCCTCACGCCCTCGAGATCCGCGATAGAGACCGAACACCTGACATCGAGGCAAGTGGACGTGCTGGTT
GCCCTCGAACGAGCCGGAGGTTCCATCAGTCTCGTCGCTCTCGTCTTCATCTTCATCGCCTACGCTCTGTTCCGG
CCGGTGCGCAATATTCAAAACACCTTCATCGTCTTCGCCAGCGTTTCCAATGTTGGGGCCAGTGTTGCGAGCATC
ATTGCGCTGGATGGTATCAAGGCTGGAACGGAGACGCCGCTGTGTCAGACGCAGAGCTTTCTGTTTGAGATGTTG
GTGACCTTTTTCTTGATGTCGCTGCATCATCATCTTCTCTCTCTCTCTTCTTGTTGTATCTCAGGGGCTTTAAAC
CACCATGATACTCGTTCCCAATCATCTTGTCTCTCTTCTTGTTGTATCTCAGGGGCCTCAAACCACCATGATACT
CGCCCCCACGAACCGCTGACTCTTCCAGGTTCATGCAATCCGATCCCTGGTGGTCCCTCGCCATGTCCGTCAACG
TCTTCCTCGTCTTCTATTGCCGCACCTCTCCCGACTCGTTCCGAACATGGTGGTGGATCTACTGCCTCATCTGCT
ACGGCGGCCCATTCGCCATCGCCCTGACACTCCTCCTCATCAAGAACAAGGAGCGCGGTCCCGTCTACGGTCAAG
CCACGGTATGCTTCCGACAGCGTCATGACAGCAATCTCAGCTGACGAGCGGCAGATCTGGTGCTGGGTCGACACC
AAGTGGGACAGCATTCGCATCTTTACCTACTACATGCTCATCTGGGTATGCATCATCGGCTCCTTCGTCTGCTAC
AGTCTGGTAGGATATCACGTCTTCCGCTCCCGGAATCGCCTCCGCAGCTTTCCGGCCTCCAAGAACAGAGAGGCA
GGCCAGTATGAGAGGGTATGTAGACCTTGCCTGGCCTTGTAGAGAGCCAGAGATCTGTTGAACCGGCAAAGCTGA
CCATTTATACTTGGTATACCCAAAGACGATGCAGCAACGTGAAGCCAATGGCGGTACGAGAACTACAGAGGTCAA
TAGCAGCCACTTGTCGGCCTCCGTCAGGGGCAACACTACGCTCGTCGAGCCCAAGCAAGTCCACGTCAGATCTGC
AGGACAGGCTTCATCCTTTGACAACGTCCCGAAATCCCCCGGGAGACCTACAGCGGCGTCAGGCGCTCCTGGTCA
CGGCAGCTTCATGTCCCCTCTGGGAGAGGGCGTCAAGATTGGCAAGCGGTTCGCGTCCAAGTTCGTCGTCGACGA
TCCCGTCAAGCGAGCCTACCTACGGACGAGCCTCCTCTTTGCTCTCAGTGTTCTCGTTACTTGGATCCCTAGTAG
TCTGAACCGGATCCACGGCTGGCTGGTGGGCGCGTCGCCCTTTGAGTTCCACGTCGCTACAGCCGCTGTTCTGCC
TCTTCAGGGGGTCTGGAACTGCTTCATCTTCTTCGTCACGAGCTGGAAGGTCGTCAAGCAGTGTCTCCGCCGTCT
ACCGTCTGATTCGTCCCGTTCAGCTAGGGGCGAGTCCATGGGCACCGTCGATCGTACCGTCGGCCGCCGTCATCG
GGATCATCTCCGGTCCGAGACGGATTTCGACGACGACGACGACGACGACGACGACGACGACGACGACGACGAGTC
GGGGAATATGGGGAGCGATGTCGAGCTCAGACACGTGTCTGATGACGGAGGCAAAGAGACGTCTAGTGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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