Protein ID | Ophcf2|02807 |
Gene name | |
Location | scaffold_02:4825008..4826203 |
Strand | + |
Gene length (bp) | 1195 |
Transcript length (bp) | 1125 |
Coding sequence length (bp) | 1125 |
Protein length (aa) | 375 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00153 | Mito_carr | Mitochondrial carrier protein | 1.1E-20 | 63 | 157 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 1.1E-16 | 164 | 259 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 4.5E-17 | 283 | 372 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 68 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 343 | 365 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|02807 MPSSPLPTGVFADSTSGLSRDPMHQVRQHNAGASLSPSAIGGVPAVCPTDEEALTPRKDKSSWDYVWKSGVAGGF AGCAAKTVVAPLDRVKILFQASNPQFAKYTGSSFGVATALRDIYNAEGGFGLLRGHSATLLRIFPYAGIKFLAYE QIRAVLIPSKEYETPLRRLLSGSLAGVTSVFFTYPLEVVRVRLAFETKSQGQSSLKSICRQMYNERRPGGQAAAG LVNFYRGFVPTVLGMLPYAGTSFLTHDTVSDLLRHPSLAPHTTLPRSKNQPADKAAPLRSWAELCAGGMAGLVSQ TASYPLEVIRRRMQVGGAVGDGRRLRLGETTALIFRERGLRGFFVGITIGYIKVIPMAAVSFYTYERSKLLLGI* |
Coding | >Ophcf2|02807 ATGCCGTCGTCTCCGTTGCCGACGGGTGTTTTCGCCGACAGCACGTCGGGTCTGTCCCGCGATCCGATGCATCAG GTTCGACAGCACAATGCCGGAGCGTCCTTGTCCCCGTCGGCTATCGGGGGGGTGCCGGCAGTGTGTCCTACCGAC GAGGAGGCTCTGACTCCGCGCAAAGACAAGAGCTCGTGGGATTATGTCTGGAAGTCGGGCGTTGCGGGCGGGTTT GCCGGTTGCGCTGCCAAAACCGTCGTCGCGCCGCTAGATCGGGTCAAGATCCTCTTTCAGGCCAGCAACCCGCAG TTTGCAAAGTACACAGGCTCGTCATTTGGCGTCGCAACGGCGCTGAGGGACATCTACAACGCCGAGGGCGGCTTC GGCCTGTTACGCGGCCACTCGGCGACGCTGCTGCGCATCTTTCCCTACGCCGGCATCAAGTTTCTCGCCTACGAG CAGATCCGGGCGGTGCTGATCCCGTCAAAGGAGTATGAGACACCGTTGAGGCGGTTGCTGAGCGGTAGCCTTGCT GGCGTCACCTCCGTCTTCTTCACGTACCCGCTCGAGGTGGTGCGGGTGCGGCTCGCGTTTGAGACGAAATCACAG GGCCAGTCGTCGTTAAAGTCCATCTGCCGGCAAATGTACAACGAGCGTCGACCAGGAGGCCAGGCGGCGGCAGGC CTCGTCAACTTTTACCGCGGCTTCGTACCGACCGTTCTGGGCATGCTGCCGTACGCGGGGACGTCGTTTCTAACG CACGACACCGTCAGCGACCTCCTGCGTCACCCGTCTCTGGCGCCGCACACGACGCTGCCGCGCAGCAAGAACCAG CCAGCCGACAAGGCGGCTCCGCTGCGGTCGTGGGCGGAGCTGTGCGCCGGAGGGATGGCCGGCCTCGTCTCGCAG ACGGCTTCGTACCCGCTCGAGGTGATCCGGAGGAGGATGCAGGTCGGGGGCGCCGTGGGTGATGGACGGCGCTTG CGGCTGGGCGAGACGACGGCTCTCATCTTCCGGGAGAGGGGATTGCGCGGCTTCTTTGTCGGCATCACGATTGGA TACATCAAGGTGATTCCCATGGCCGCCGTCAGCTTTTATACGTACGAGCGGTCCAAGCTGCTCTTGGGCATCTGA |
Transcript | >Ophcf2|02807 ATGCCGTCGTCTCCGTTGCCGACGGGTGTTTTCGCCGACAGCACGTCGGGTCTGTCCCGCGATCCGATGCATCAG GTTCGACAGCACAATGCCGGAGCGTCCTTGTCCCCGTCGGCTATCGGGGGGGTGCCGGCAGTGTGTCCTACCGAC GAGGAGGCTCTGACTCCGCGCAAAGACAAGAGCTCGTGGGATTATGTCTGGAAGTCGGGCGTTGCGGGCGGGTTT GCCGGTTGCGCTGCCAAAACCGTCGTCGCGCCGCTAGATCGGGTCAAGATCCTCTTTCAGGCCAGCAACCCGCAG TTTGCAAAGTACACAGGCTCGTCATTTGGCGTCGCAACGGCGCTGAGGGACATCTACAACGCCGAGGGCGGCTTC GGCCTGTTACGCGGCCACTCGGCGACGCTGCTGCGCATCTTTCCCTACGCCGGCATCAAGTTTCTCGCCTACGAG CAGATCCGGGCGGTGCTGATCCCGTCAAAGGAGTATGAGACACCGTTGAGGCGGTTGCTGAGCGGTAGCCTTGCT GGCGTCACCTCCGTCTTCTTCACGTACCCGCTCGAGGTGGTGCGGGTGCGGCTCGCGTTTGAGACGAAATCACAG GGCCAGTCGTCGTTAAAGTCCATCTGCCGGCAAATGTACAACGAGCGTCGACCAGGAGGCCAGGCGGCGGCAGGC CTCGTCAACTTTTACCGCGGCTTCGTACCGACCGTTCTGGGCATGCTGCCGTACGCGGGGACGTCGTTTCTAACG CACGACACCGTCAGCGACCTCCTGCGTCACCCGTCTCTGGCGCCGCACACGACGCTGCCGCGCAGCAAGAACCAG CCAGCCGACAAGGCGGCTCCGCTGCGGTCGTGGGCGGAGCTGTGCGCCGGAGGGATGGCCGGCCTCGTCTCGCAG ACGGCTTCGTACCCGCTCGAGGTGATCCGGAGGAGGATGCAGGTCGGGGGCGCCGTGGGTGATGGACGGCGCTTG CGGCTGGGCGAGACGACGGCTCTCATCTTCCGGGAGAGGGGATTGCGCGGCTTCTTTGTCGGCATCACGATTGGA TACATCAAGGTGATTCCCATGGCCGCCGTCAGCTTTTATACGTACGAGCGGTCCAAGCTGCTCTTGGGCATCTGA |
Gene | >Ophcf2|02807 ATGCCGTCGTCTCCGTTGCCGACGGGTGTTTTCGCCGACAGCACGTCGGGTCTGTCCCGCGATCCGATGCATCAG GTTCGACAGCACAATGCCGGAGCGTCCTTGTCCCCGTCGGCTATCGGGGGGGTGCCGGCAGTGTGTCCTACCGAC GAGGAGGCTCTGACTCCGCGCAAAGACAAGAGCTCGTGGGATTATGTCTGGAAGTCGGGCGTTGCGGGCGGGTTT GCCGGTTGCGCTGTGAGTTGGAATTCGCTGCAGGGAGAGAAGATAAGGGAGTTGGCTGACGGGACTTGTTGCTCG CTCGCAGGCCAAAACCGTCGTCGCGCCGCTAGATCGGGTCAAGATCCTCTTTCAGGCCAGCAACCCGCAGTTTGC AAAGTACACAGGCTCGTCATTTGGCGTCGCAACGGCGCTGAGGGACATCTACAACGCCGAGGGCGGCTTCGGCCT GTTACGCGGCCACTCGGCGACGCTGCTGCGCATCTTTCCCTACGCCGGCATCAAGTTTCTCGCCTACGAGCAGAT CCGGGCGGTGCTGATCCCGTCAAAGGAGTATGAGACACCGTTGAGGCGGTTGCTGAGCGGTAGCCTTGCTGGCGT CACCTCCGTCTTCTTCACGTACCCGCTCGAGGTGGTGCGGGTGCGGCTCGCGTTTGAGACGAAATCACAGGGCCA GTCGTCGTTAAAGTCCATCTGCCGGCAAATGTACAACGAGCGTCGACCAGGAGGCCAGGCGGCGGCAGGCCTCGT CAACTTTTACCGCGGCTTCGTACCGACCGTTCTGGGCATGCTGCCGTACGCGGGGACGTCGTTTCTAACGCACGA CACCGTCAGCGACCTCCTGCGTCACCCGTCTCTGGCGCCGCACACGACGCTGCCGCGCAGCAAGAACCAGCCAGC CGACAAGGCGGCTCCGCTGCGGTCGTGGGCGGAGCTGTGCGCCGGAGGGATGGCCGGCCTCGTCTCGCAGACGGC TTCGTACCCGCTCGAGGTGATCCGGAGGAGGATGCAGGTCGGGGGCGCCGTGGGTGATGGACGGCGCTTGCGGCT GGGCGAGACGACGGCTCTCATCTTCCGGGAGAGGGGATTGCGCGGCTTCTTTGTCGGCATCACGATTGGATACAT CAAGGTGATTCCCATGGCCGCCGTCAGCTTTTATACGTACGAGCGGTCCAAGCTGCTCTTGGGCATCTGA |