Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02807
Gene name
Locationscaffold_02:4825008..4826203
Strand+
Gene length (bp)1195
Transcript length (bp)1125
Coding sequence length (bp)1125
Protein length (aa) 375

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 1.1E-20 63 157
PF00153 Mito_carr Mitochondrial carrier protein 1.1E-16 164 259
PF00153 Mito_carr Mitochondrial carrier protein 4.5E-17 283 372

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 68 0.45

Transmembrane Domains

Domain # Start End Length
1 343 365 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02807
MPSSPLPTGVFADSTSGLSRDPMHQVRQHNAGASLSPSAIGGVPAVCPTDEEALTPRKDKSSWDYVWKSGVAGGF
AGCAAKTVVAPLDRVKILFQASNPQFAKYTGSSFGVATALRDIYNAEGGFGLLRGHSATLLRIFPYAGIKFLAYE
QIRAVLIPSKEYETPLRRLLSGSLAGVTSVFFTYPLEVVRVRLAFETKSQGQSSLKSICRQMYNERRPGGQAAAG
LVNFYRGFVPTVLGMLPYAGTSFLTHDTVSDLLRHPSLAPHTTLPRSKNQPADKAAPLRSWAELCAGGMAGLVSQ
TASYPLEVIRRRMQVGGAVGDGRRLRLGETTALIFRERGLRGFFVGITIGYIKVIPMAAVSFYTYERSKLLLGI*
Coding >Ophcf2|02807
ATGCCGTCGTCTCCGTTGCCGACGGGTGTTTTCGCCGACAGCACGTCGGGTCTGTCCCGCGATCCGATGCATCAG
GTTCGACAGCACAATGCCGGAGCGTCCTTGTCCCCGTCGGCTATCGGGGGGGTGCCGGCAGTGTGTCCTACCGAC
GAGGAGGCTCTGACTCCGCGCAAAGACAAGAGCTCGTGGGATTATGTCTGGAAGTCGGGCGTTGCGGGCGGGTTT
GCCGGTTGCGCTGCCAAAACCGTCGTCGCGCCGCTAGATCGGGTCAAGATCCTCTTTCAGGCCAGCAACCCGCAG
TTTGCAAAGTACACAGGCTCGTCATTTGGCGTCGCAACGGCGCTGAGGGACATCTACAACGCCGAGGGCGGCTTC
GGCCTGTTACGCGGCCACTCGGCGACGCTGCTGCGCATCTTTCCCTACGCCGGCATCAAGTTTCTCGCCTACGAG
CAGATCCGGGCGGTGCTGATCCCGTCAAAGGAGTATGAGACACCGTTGAGGCGGTTGCTGAGCGGTAGCCTTGCT
GGCGTCACCTCCGTCTTCTTCACGTACCCGCTCGAGGTGGTGCGGGTGCGGCTCGCGTTTGAGACGAAATCACAG
GGCCAGTCGTCGTTAAAGTCCATCTGCCGGCAAATGTACAACGAGCGTCGACCAGGAGGCCAGGCGGCGGCAGGC
CTCGTCAACTTTTACCGCGGCTTCGTACCGACCGTTCTGGGCATGCTGCCGTACGCGGGGACGTCGTTTCTAACG
CACGACACCGTCAGCGACCTCCTGCGTCACCCGTCTCTGGCGCCGCACACGACGCTGCCGCGCAGCAAGAACCAG
CCAGCCGACAAGGCGGCTCCGCTGCGGTCGTGGGCGGAGCTGTGCGCCGGAGGGATGGCCGGCCTCGTCTCGCAG
ACGGCTTCGTACCCGCTCGAGGTGATCCGGAGGAGGATGCAGGTCGGGGGCGCCGTGGGTGATGGACGGCGCTTG
CGGCTGGGCGAGACGACGGCTCTCATCTTCCGGGAGAGGGGATTGCGCGGCTTCTTTGTCGGCATCACGATTGGA
TACATCAAGGTGATTCCCATGGCCGCCGTCAGCTTTTATACGTACGAGCGGTCCAAGCTGCTCTTGGGCATCTGA
Transcript >Ophcf2|02807
ATGCCGTCGTCTCCGTTGCCGACGGGTGTTTTCGCCGACAGCACGTCGGGTCTGTCCCGCGATCCGATGCATCAG
GTTCGACAGCACAATGCCGGAGCGTCCTTGTCCCCGTCGGCTATCGGGGGGGTGCCGGCAGTGTGTCCTACCGAC
GAGGAGGCTCTGACTCCGCGCAAAGACAAGAGCTCGTGGGATTATGTCTGGAAGTCGGGCGTTGCGGGCGGGTTT
GCCGGTTGCGCTGCCAAAACCGTCGTCGCGCCGCTAGATCGGGTCAAGATCCTCTTTCAGGCCAGCAACCCGCAG
TTTGCAAAGTACACAGGCTCGTCATTTGGCGTCGCAACGGCGCTGAGGGACATCTACAACGCCGAGGGCGGCTTC
GGCCTGTTACGCGGCCACTCGGCGACGCTGCTGCGCATCTTTCCCTACGCCGGCATCAAGTTTCTCGCCTACGAG
CAGATCCGGGCGGTGCTGATCCCGTCAAAGGAGTATGAGACACCGTTGAGGCGGTTGCTGAGCGGTAGCCTTGCT
GGCGTCACCTCCGTCTTCTTCACGTACCCGCTCGAGGTGGTGCGGGTGCGGCTCGCGTTTGAGACGAAATCACAG
GGCCAGTCGTCGTTAAAGTCCATCTGCCGGCAAATGTACAACGAGCGTCGACCAGGAGGCCAGGCGGCGGCAGGC
CTCGTCAACTTTTACCGCGGCTTCGTACCGACCGTTCTGGGCATGCTGCCGTACGCGGGGACGTCGTTTCTAACG
CACGACACCGTCAGCGACCTCCTGCGTCACCCGTCTCTGGCGCCGCACACGACGCTGCCGCGCAGCAAGAACCAG
CCAGCCGACAAGGCGGCTCCGCTGCGGTCGTGGGCGGAGCTGTGCGCCGGAGGGATGGCCGGCCTCGTCTCGCAG
ACGGCTTCGTACCCGCTCGAGGTGATCCGGAGGAGGATGCAGGTCGGGGGCGCCGTGGGTGATGGACGGCGCTTG
CGGCTGGGCGAGACGACGGCTCTCATCTTCCGGGAGAGGGGATTGCGCGGCTTCTTTGTCGGCATCACGATTGGA
TACATCAAGGTGATTCCCATGGCCGCCGTCAGCTTTTATACGTACGAGCGGTCCAAGCTGCTCTTGGGCATCTGA
Gene >Ophcf2|02807
ATGCCGTCGTCTCCGTTGCCGACGGGTGTTTTCGCCGACAGCACGTCGGGTCTGTCCCGCGATCCGATGCATCAG
GTTCGACAGCACAATGCCGGAGCGTCCTTGTCCCCGTCGGCTATCGGGGGGGTGCCGGCAGTGTGTCCTACCGAC
GAGGAGGCTCTGACTCCGCGCAAAGACAAGAGCTCGTGGGATTATGTCTGGAAGTCGGGCGTTGCGGGCGGGTTT
GCCGGTTGCGCTGTGAGTTGGAATTCGCTGCAGGGAGAGAAGATAAGGGAGTTGGCTGACGGGACTTGTTGCTCG
CTCGCAGGCCAAAACCGTCGTCGCGCCGCTAGATCGGGTCAAGATCCTCTTTCAGGCCAGCAACCCGCAGTTTGC
AAAGTACACAGGCTCGTCATTTGGCGTCGCAACGGCGCTGAGGGACATCTACAACGCCGAGGGCGGCTTCGGCCT
GTTACGCGGCCACTCGGCGACGCTGCTGCGCATCTTTCCCTACGCCGGCATCAAGTTTCTCGCCTACGAGCAGAT
CCGGGCGGTGCTGATCCCGTCAAAGGAGTATGAGACACCGTTGAGGCGGTTGCTGAGCGGTAGCCTTGCTGGCGT
CACCTCCGTCTTCTTCACGTACCCGCTCGAGGTGGTGCGGGTGCGGCTCGCGTTTGAGACGAAATCACAGGGCCA
GTCGTCGTTAAAGTCCATCTGCCGGCAAATGTACAACGAGCGTCGACCAGGAGGCCAGGCGGCGGCAGGCCTCGT
CAACTTTTACCGCGGCTTCGTACCGACCGTTCTGGGCATGCTGCCGTACGCGGGGACGTCGTTTCTAACGCACGA
CACCGTCAGCGACCTCCTGCGTCACCCGTCTCTGGCGCCGCACACGACGCTGCCGCGCAGCAAGAACCAGCCAGC
CGACAAGGCGGCTCCGCTGCGGTCGTGGGCGGAGCTGTGCGCCGGAGGGATGGCCGGCCTCGTCTCGCAGACGGC
TTCGTACCCGCTCGAGGTGATCCGGAGGAGGATGCAGGTCGGGGGCGCCGTGGGTGATGGACGGCGCTTGCGGCT
GGGCGAGACGACGGCTCTCATCTTCCGGGAGAGGGGATTGCGCGGCTTCTTTGTCGGCATCACGATTGGATACAT
CAAGGTGATTCCCATGGCCGCCGTCAGCTTTTATACGTACGAGCGGTCCAAGCTGCTCTTGGGCATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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