Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02784
Gene name
Locationscaffold_02:4751822..4753342
Strand-
Gene length (bp)1520
Transcript length (bp)1443
Coding sequence length (bp)1443
Protein length (aa) 481

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 21 38 17
2 105 127 22
3 261 283 22
4 288 310 22
5 343 365 22
6 385 404 19
7 409 431 22
8 446 468 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02784
MERQRRACLRILRLVWARDTYFSALIINLVAFLLPALYNSLSKLWIAKIDPSMVVTVDVYIYISTLAEILNEGLP
RASWSIIGNKSKRTPTERLAITKTLLLTQAILGLVMSLTLLSGAASFARFFVPSEVRSQSISFVRISSFSALGSA
VEAAVATGTRSLDQPDVPFVLSCVRFAVNILLDLLFLSSSRVSRWEPTVNMQATIQLACNLSSALAGVTYFLLRN
RETGGRSGARPSFSALRLLIRPGIFTLVESAVRNALYLWLVSNVISMGVTYATAWGVFNSIRWGLLMVPVSALEA
TTLTFVGHEWGRWRHEMVMSMGRWYASYASLLRIFRPARLSTILALAFEVPVCIFMSMGGIRYFTRQLSGSDAVA
LVAEKMWRTIDWCYIMYAVSTQLVAILLATRPKWYLWQSLASNLLYVLPWAVFCQVKHLNEDDAWTYHALIFGGS
LVFSFVCTPIVLAVWVWVLRTGRAHLEAHP*
Coding >Ophcf2|02784
ATGGAGAGGCAGAGGCGCGCGTGCCTGCGCATACTGAGGCTCGTCTGGGCTCGGGACACGTATTTCAGCGCGCTC
ATCATCAACCTGGTTGCCTTCCTTCTACCAGCTTTGTATAACAGCCTGTCAAAGCTATGGATTGCCAAGATAGAC
CCTTCCATGGTCGTCACCGTCGACGTCTACATTTACATCTCAACCCTGGCCGAGATCCTCAACGAAGGCCTCCCT
CGTGCCTCATGGTCCATCATCGGAAACAAGAGCAAGCGGACGCCGACCGAGCGCTTGGCCATCACCAAGACGCTC
CTCCTGACTCAGGCCATCCTCGGGCTCGTCATGTCGCTGACGCTTCTGAGCGGAGCCGCCTCCTTCGCCCGCTTC
TTCGTCCCCAGCGAGGTACGCAGTCAGAGCATCAGCTTTGTCCGCATCAGTAGCTTCTCGGCGCTCGGAAGTGCG
GTTGAGGCGGCTGTGGCGACGGGAACGCGTTCTCTGGACCAGCCTGACGTGCCCTTTGTCCTCAGCTGCGTCCGG
TTCGCGGTGAACATCTTGCTGGACTTGCTGTTTCTCTCGAGCTCGAGAGTTTCCAGATGGGAGCCTACGGTCAAT
ATGCAGGCTACGATACAGCTGGCTTGCAACCTCTCCTCCGCTCTGGCCGGCGTCACCTACTTCCTGCTTCGAAAC
CGGGAGACCGGAGGCCGATCCGGAGCCCGGCCGAGCTTCTCGGCTCTCCGGCTGTTGATCCGGCCCGGCATCTTC
ACGCTAGTTGAGTCTGCGGTTCGCAACGCTCTCTATCTCTGGCTCGTCAGCAACGTCATCTCCATGGGCGTCACG
TACGCGACTGCCTGGGGCGTCTTCAACTCCATCCGCTGGGGCCTTTTGATGGTGCCCGTCTCGGCTCTCGAAGCC
ACGACGCTGACGTTTGTCGGGCATGAATGGGGACGATGGCGGCATGAGATGGTGATGAGTATGGGACGTTGGTAC
GCGAGCTATGCCTCTCTGCTGCGTATCTTCCGCCCTGCCCGACTCTCGACGATACTGGCACTCGCCTTCGAAGTG
CCTGTATGTATCTTCATGTCTATGGGTGGCATCCGCTACTTTACCCGCCAGCTCAGCGGCAGTGACGCCGTCGCC
CTCGTGGCCGAGAAGATGTGGAGGACCATAGACTGGTGCTACATCATGTACGCCGTCTCGACGCAGCTGGTTGCC
ATTCTGCTGGCCACGAGGCCAAAGTGGTATCTGTGGCAGAGTCTGGCCAGCAACCTCCTCTATGTTCTCCCCTGG
GCTGTTTTCTGCCAGGTGAAGCATCTGAACGAGGACGATGCCTGGACCTATCATGCCCTGATCTTCGGAGGCAGC
CTGGTGTTTAGCTTCGTTTGCACCCCTATCGTTCTGGCTGTTTGGGTCTGGGTTCTGAGGACGGGCAGGGCGCAC
TTGGAAGCTCATCCTTGA
Transcript >Ophcf2|02784
ATGGAGAGGCAGAGGCGCGCGTGCCTGCGCATACTGAGGCTCGTCTGGGCTCGGGACACGTATTTCAGCGCGCTC
ATCATCAACCTGGTTGCCTTCCTTCTACCAGCTTTGTATAACAGCCTGTCAAAGCTATGGATTGCCAAGATAGAC
CCTTCCATGGTCGTCACCGTCGACGTCTACATTTACATCTCAACCCTGGCCGAGATCCTCAACGAAGGCCTCCCT
CGTGCCTCATGGTCCATCATCGGAAACAAGAGCAAGCGGACGCCGACCGAGCGCTTGGCCATCACCAAGACGCTC
CTCCTGACTCAGGCCATCCTCGGGCTCGTCATGTCGCTGACGCTTCTGAGCGGAGCCGCCTCCTTCGCCCGCTTC
TTCGTCCCCAGCGAGGTACGCAGTCAGAGCATCAGCTTTGTCCGCATCAGTAGCTTCTCGGCGCTCGGAAGTGCG
GTTGAGGCGGCTGTGGCGACGGGAACGCGTTCTCTGGACCAGCCTGACGTGCCCTTTGTCCTCAGCTGCGTCCGG
TTCGCGGTGAACATCTTGCTGGACTTGCTGTTTCTCTCGAGCTCGAGAGTTTCCAGATGGGAGCCTACGGTCAAT
ATGCAGGCTACGATACAGCTGGCTTGCAACCTCTCCTCCGCTCTGGCCGGCGTCACCTACTTCCTGCTTCGAAAC
CGGGAGACCGGAGGCCGATCCGGAGCCCGGCCGAGCTTCTCGGCTCTCCGGCTGTTGATCCGGCCCGGCATCTTC
ACGCTAGTTGAGTCTGCGGTTCGCAACGCTCTCTATCTCTGGCTCGTCAGCAACGTCATCTCCATGGGCGTCACG
TACGCGACTGCCTGGGGCGTCTTCAACTCCATCCGCTGGGGCCTTTTGATGGTGCCCGTCTCGGCTCTCGAAGCC
ACGACGCTGACGTTTGTCGGGCATGAATGGGGACGATGGCGGCATGAGATGGTGATGAGTATGGGACGTTGGTAC
GCGAGCTATGCCTCTCTGCTGCGTATCTTCCGCCCTGCCCGACTCTCGACGATACTGGCACTCGCCTTCGAAGTG
CCTGTATGTATCTTCATGTCTATGGGTGGCATCCGCTACTTTACCCGCCAGCTCAGCGGCAGTGACGCCGTCGCC
CTCGTGGCCGAGAAGATGTGGAGGACCATAGACTGGTGCTACATCATGTACGCCGTCTCGACGCAGCTGGTTGCC
ATTCTGCTGGCCACGAGGCCAAAGTGGTATCTGTGGCAGAGTCTGGCCAGCAACCTCCTCTATGTTCTCCCCTGG
GCTGTTTTCTGCCAGGTGAAGCATCTGAACGAGGACGATGCCTGGACCTATCATGCCCTGATCTTCGGAGGCAGC
CTGGTGTTTAGCTTCGTTTGCACCCCTATCGTTCTGGCTGTTTGGGTCTGGGTTCTGAGGACGGGCAGGGCGCAC
TTGGAAGCTCATCCTTGA
Gene >Ophcf2|02784
ATGGAGAGGCAGAGGCGCGCGTGCCTGCGCATACTGAGGCTCGTCTGGGCTCGGGACACGTATTTCAGCGCGCTC
ATCATCAACCTGGTTGCCTTCCTTCTACCAGCTTTGTATAACAGCCTGTCAAAGCTATGGATTGCCAAGATAGAC
CCTTCCATGGTCGTCACCGTCGAGTTAGTAGTACCCTACAAGTTCCCTTCCCAACGAGTCACATCCCAGCAACAT
GGATGCATACTGACCCGTCTCTCAGCGTCTACATTTACATCTCAACCCTGGCCGAGATCCTCAACGAAGGCCTCC
CTCGTGCCTCATGGTCCATCATCGGAAACAAGAGCAAGCGGACGCCGACCGAGCGCTTGGCCATCACCAAGACGC
TCCTCCTGACTCAGGCCATCCTCGGGCTCGTCATGTCGCTGACGCTTCTGAGCGGAGCCGCCTCCTTCGCCCGCT
TCTTCGTCCCCAGCGAGGTACGCAGTCAGAGCATCAGCTTTGTCCGCATCAGTAGCTTCTCGGCGCTCGGAAGTG
CGGTTGAGGCGGCTGTGGCGACGGGAACGCGTTCTCTGGACCAGCCTGACGTGCCCTTTGTCCTCAGCTGCGTCC
GGTTCGCGGTGAACATCTTGCTGGACTTGCTGTTTCTCTCGAGCTCGAGAGTTTCCAGATGGGAGCCTACGGTCA
ATATGCAGGCTACGATACAGCTGGCTTGCAACCTCTCCTCCGCTCTGGCCGGCGTCACCTACTTCCTGCTTCGAA
ACCGGGAGACCGGAGGCCGATCCGGAGCCCGGCCGAGCTTCTCGGCTCTCCGGCTGTTGATCCGGCCCGGCATCT
TCACGCTAGTTGAGTCTGCGGTTCGCAACGCTCTCTATCTCTGGCTCGTCAGCAACGTCATCTCCATGGGCGTCA
CGTACGCGACTGCCTGGGGCGTCTTCAACTCCATCCGCTGGGGCCTTTTGATGGTGCCCGTCTCGGCTCTCGAAG
CCACGACGCTGACGTTTGTCGGGCATGAATGGGGACGATGGCGGCATGAGATGGTGATGAGTATGGGACGTTGGT
ACGCGAGCTATGCCTCTCTGCTGCGTATCTTCCGCCCTGCCCGACTCTCGACGATACTGGCACTCGCCTTCGAAG
TGCCTGTATGTATCTTCATGTCTATGGGTGGCATCCGCTACTTTACCCGCCAGCTCAGCGGCAGTGACGCCGTCG
CCCTCGTGGCCGAGAAGATGTGGAGGACCATAGACTGGTGCTACATCATGTACGCCGTCTCGACGCAGCTGGTTG
CCATTCTGCTGGCCACGAGGCCAAAGTGGTATCTGTGGCAGAGTCTGGCCAGCAACCTCCTCTATGTTCTCCCCT
GGGCTGTTTTCTGCCAGGTGAAGCATCTGAACGAGGACGATGCCTGGACCTATCATGCCCTGATCTTCGGAGGCA
GCCTGGTGTTTAGCTTCGTTTGCACCCCTATCGTTCTGGCTGTTTGGGTCTGGGTTCTGAGGACGGGCAGGGCGC
ACTTGGAAGCTCATCCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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