Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02782
Gene name
Locationscaffold_02:4748332..4749463
Strand-
Gene length (bp)1131
Transcript length (bp)1131
Coding sequence length (bp)1131
Protein length (aa) 377

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20246 DUF6601 Family of unknown function (DUF6601) 1.2E-72 95 332

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 286 308 22
2 328 350 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02782
MSPPLPRWQADSGASNSRPFYAEPPFNRDVAPVVNGRFRYDSSDCSEGSMTSGASQFCSPPLDAINFSSYKDLTP
TLYLAGGQKGARAYRIDSIEEYLAASFDLERLHLIQNRLWLAGLPVPARSLHRQKILGREIVITDQSDLHLTWRE
STLFLKPLWEPLLDHGFWRYELCNKDVKTYLSATGLLMSYIWLICSEPDLLIAKQHNLVPRKLNWAAWAFFSRDF
LDRHSLDGHNEDMAKRYDYGELRIQRLNLIYRFAPETFPNYLLRGYLYGYNQFSQFFGRNFAWAAVAVLYAGVVL
AAMQVALAVPPIKDDVSFQRAAYGFTVFILVAMVFFSTFALAYLVIVFNLNLIFTRQKVRQHEQRAKEATRSNNA
P*
Coding >Ophcf2|02782
ATGTCACCTCCCCTTCCGAGATGGCAGGCCGACTCGGGAGCCAGCAATTCGAGACCGTTTTACGCCGAGCCCCCC
TTCAACAGAGACGTGGCGCCCGTCGTCAACGGAAGATTTCGATATGATTCCAGTGATTGCAGTGAAGGCTCGATG
ACCTCTGGTGCGAGCCAATTCTGCTCGCCGCCTTTGGATGCCATTAATTTCTCGTCTTACAAGGACTTGACGCCG
ACTCTCTACCTTGCAGGCGGTCAAAAGGGAGCAAGAGCCTATCGCATCGACTCCATCGAGGAATATCTCGCTGCC
TCTTTCGACCTGGAACGGCTCCATCTCATTCAAAACCGTCTATGGCTGGCCGGACTCCCCGTTCCCGCACGGTCG
TTGCATAGACAAAAGATACTCGGTCGCGAGATTGTCATCACGGATCAGTCAGACCTGCATCTCACCTGGCGTGAG
TCGACTCTCTTCCTCAAGCCCTTGTGGGAACCCCTTCTCGATCATGGTTTCTGGCGATATGAGCTCTGCAACAAA
GACGTCAAGACTTATCTCAGTGCCACTGGTCTTCTCATGTCTTACATCTGGCTCATCTGCTCCGAGCCAGACCTG
CTGATCGCAAAACAACACAACTTGGTGCCCCGTAAGCTCAACTGGGCAGCTTGGGCCTTCTTCTCCCGGGACTTC
CTCGACAGGCATTCTCTAGACGGACACAACGAGGACATGGCCAAACGATACGACTACGGCGAGTTACGAATCCAA
CGCCTCAACTTGATCTATCGGTTCGCGCCCGAGACGTTCCCAAACTATCTCCTCCGCGGCTATCTCTACGGCTAC
AACCAGTTCAGCCAGTTCTTCGGCCGTAACTTTGCCTGGGCGGCCGTGGCGGTGCTGTATGCTGGTGTCGTGCTG
GCGGCTATGCAGGTGGCGCTCGCCGTGCCTCCTATCAAGGACGACGTGAGTTTCCAGAGGGCGGCTTATGGATTT
ACCGTCTTCATTCTGGTTGCCATGGTCTTCTTCTCTACTTTCGCGCTGGCGTATCTTGTCATCGTGTTTAATTTG
AACCTCATCTTCACCAGACAGAAAGTCAGGCAACATGAGCAACGGGCAAAGGAAGCGACGAGGTCGAACAACGCC
CCATAG
Transcript >Ophcf2|02782
ATGTCACCTCCCCTTCCGAGATGGCAGGCCGACTCGGGAGCCAGCAATTCGAGACCGTTTTACGCCGAGCCCCCC
TTCAACAGAGACGTGGCGCCCGTCGTCAACGGAAGATTTCGATATGATTCCAGTGATTGCAGTGAAGGCTCGATG
ACCTCTGGTGCGAGCCAATTCTGCTCGCCGCCTTTGGATGCCATTAATTTCTCGTCTTACAAGGACTTGACGCCG
ACTCTCTACCTTGCAGGCGGTCAAAAGGGAGCAAGAGCCTATCGCATCGACTCCATCGAGGAATATCTCGCTGCC
TCTTTCGACCTGGAACGGCTCCATCTCATTCAAAACCGTCTATGGCTGGCCGGACTCCCCGTTCCCGCACGGTCG
TTGCATAGACAAAAGATACTCGGTCGCGAGATTGTCATCACGGATCAGTCAGACCTGCATCTCACCTGGCGTGAG
TCGACTCTCTTCCTCAAGCCCTTGTGGGAACCCCTTCTCGATCATGGTTTCTGGCGATATGAGCTCTGCAACAAA
GACGTCAAGACTTATCTCAGTGCCACTGGTCTTCTCATGTCTTACATCTGGCTCATCTGCTCCGAGCCAGACCTG
CTGATCGCAAAACAACACAACTTGGTGCCCCGTAAGCTCAACTGGGCAGCTTGGGCCTTCTTCTCCCGGGACTTC
CTCGACAGGCATTCTCTAGACGGACACAACGAGGACATGGCCAAACGATACGACTACGGCGAGTTACGAATCCAA
CGCCTCAACTTGATCTATCGGTTCGCGCCCGAGACGTTCCCAAACTATCTCCTCCGCGGCTATCTCTACGGCTAC
AACCAGTTCAGCCAGTTCTTCGGCCGTAACTTTGCCTGGGCGGCCGTGGCGGTGCTGTATGCTGGTGTCGTGCTG
GCGGCTATGCAGGTGGCGCTCGCCGTGCCTCCTATCAAGGACGACGTGAGTTTCCAGAGGGCGGCTTATGGATTT
ACCGTCTTCATTCTGGTTGCCATGGTCTTCTTCTCTACTTTCGCGCTGGCGTATCTTGTCATCGTGTTTAATTTG
AACCTCATCTTCACCAGACAGAAAGTCAGGCAACATGAGCAACGGGCAAAGGAAGCGACGAGGTCGAACAACGCC
CCATAG
Gene >Ophcf2|02782
ATGTCACCTCCCCTTCCGAGATGGCAGGCCGACTCGGGAGCCAGCAATTCGAGACCGTTTTACGCCGAGCCCCCC
TTCAACAGAGACGTGGCGCCCGTCGTCAACGGAAGATTTCGATATGATTCCAGTGATTGCAGTGAAGGCTCGATG
ACCTCTGGTGCGAGCCAATTCTGCTCGCCGCCTTTGGATGCCATTAATTTCTCGTCTTACAAGGACTTGACGCCG
ACTCTCTACCTTGCAGGCGGTCAAAAGGGAGCAAGAGCCTATCGCATCGACTCCATCGAGGAATATCTCGCTGCC
TCTTTCGACCTGGAACGGCTCCATCTCATTCAAAACCGTCTATGGCTGGCCGGACTCCCCGTTCCCGCACGGTCG
TTGCATAGACAAAAGATACTCGGTCGCGAGATTGTCATCACGGATCAGTCAGACCTGCATCTCACCTGGCGTGAG
TCGACTCTCTTCCTCAAGCCCTTGTGGGAACCCCTTCTCGATCATGGTTTCTGGCGATATGAGCTCTGCAACAAA
GACGTCAAGACTTATCTCAGTGCCACTGGTCTTCTCATGTCTTACATCTGGCTCATCTGCTCCGAGCCAGACCTG
CTGATCGCAAAACAACACAACTTGGTGCCCCGTAAGCTCAACTGGGCAGCTTGGGCCTTCTTCTCCCGGGACTTC
CTCGACAGGCATTCTCTAGACGGACACAACGAGGACATGGCCAAACGATACGACTACGGCGAGTTACGAATCCAA
CGCCTCAACTTGATCTATCGGTTCGCGCCCGAGACGTTCCCAAACTATCTCCTCCGCGGCTATCTCTACGGCTAC
AACCAGTTCAGCCAGTTCTTCGGCCGTAACTTTGCCTGGGCGGCCGTGGCGGTGCTGTATGCTGGTGTCGTGCTG
GCGGCTATGCAGGTGGCGCTCGCCGTGCCTCCTATCAAGGACGACGTGAGTTTCCAGAGGGCGGCTTATGGATTT
ACCGTCTTCATTCTGGTTGCCATGGTCTTCTTCTCTACTTTCGCGCTGGCGTATCTTGTCATCGTGTTTAATTTG
AACCTCATCTTCACCAGACAGAAAGTCAGGCAACATGAGCAACGGGCAAAGGAAGCGACGAGGTCGAACAACGCC
CCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail